RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 DEPDC4Q8N2C3 294 aa8.35□□□□□ -1.07
BDNF-217ENST00000533131 NRBP1Q9UHY1 535 aa8.35□□□□□ -1.07
BDNF-217ENST00000533131 ERICH4A6NGS2 130 aa8.35□□□□□ -1.07
BDNF-217ENST00000533131 GTF2E1P29083 439 aaPredicted RBP8.35□□□□□ -1.07
BDNF-217ENST00000533131 PPP2R5AQ15172 486 aa8.35□□□□□ -1.07
BDNF-217ENST00000533131 PHF8Q9UPP1 1060 aa8.35□□□□□ -1.07
BDNF-217ENST00000533131 GPR37O15354 613 aa8.35□□□□□ -1.07
BDNF-217ENST00000533131 MTMR3Q13615 1198 aa8.35□□□□□ -1.07
BDNF-217ENST00000533131 IL17RAQ96F46 866 aa8.35□□□□□ -1.07
BDNF-217ENST00000533131 CDCA7LQ96GN5 454 aa8.35□□□□□ -1.07
BDNF-217ENST00000533131 INO80BQ9C086 356 aaPredicted RBP8.35□□□□□ -1.07
BDNF-217ENST00000533131 OSBPL2Q9H1P3 480 aa8.34□□□□□ -1.07
BDNF-217ENST00000533131 EVLQ9UI08 416 aaPredicted RBP8.34□□□□□ -1.07
BDNF-217ENST00000533131 UACAQ9BZF9 1416 aa8.34□□□□□ -1.07
BDNF-217ENST00000533131 NUTM2BA6NNL0 878 aaPredicted RBP8.34□□□□□ -1.07
BDNF-217ENST00000533131 NUTM2EB1AL46 878 aaPredicted RBP8.34□□□□□ -1.07
BDNF-217ENST00000533131 SCP2P22307 547 aa8.34□□□□□ -1.07
BDNF-217ENST00000533131 SEMA3FQ13275 785 aa8.34□□□□□ -1.07
BDNF-217ENST00000533131 NUTM2DQ5VT03 806 aaPredicted RBP8.34□□□□□ -1.07
BDNF-217ENST00000533131 NUTM2AQ8IVF1 878 aaPredicted RBP8.34□□□□□ -1.07
BDNF-217ENST00000533131 CUL7Q14999 1698 aa8.34□□□□□ -1.07
BDNF-217ENST00000533131 CAPN15O75808 1086 aa8.34□□□□□ -1.07
BDNF-217ENST00000533131 TTC39BQ5VTQ0 682 aaPredicted RBP8.34□□□□□ -1.07
BDNF-217ENST00000533131 SDR16C5Q8N3Y7 309 aa8.34□□□□□ -1.07
BDNF-217ENST00000533131 BSDC1Q9NW68 430 aaPredicted RBP8.34□□□□□ -1.07
BDNF-217ENST00000533131 VTI1BQ9UEU0 232 aa8.34□□□□□ -1.07
BDNF-217ENST00000533131 PCDHB8Q9UN66 801 aa8.34□□□□□ -1.07
BDNF-217ENST00000533131 PCDHB13Q9Y5F0 798 aa8.34□□□□□ -1.07
BDNF-217ENST00000533131 KIF13AQ9H1H9 1805 aa8.34□□□□□ -1.08
BDNF-217ENST00000533131 POU5F1Q01860 360 aaKnown RBP8.33□□□□□ -1.08
BDNF-217ENST00000533131 NUP155O75694 1391 aa8.33□□□□□ -1.08
BDNF-217ENST00000533131 TIAM1Q13009 1591 aa8.33□□□□□ -1.08
BDNF-217ENST00000533131 CLCN1P35523 988 aa8.33□□□□□ -1.08
BDNF-217ENST00000533131 MAPK8P45983 427 aa8.33□□□□□ -1.08
BDNF-217ENST00000533131 RAVER1Q8IY67 606 aaKnown RBP8.33□□□□□ -1.08
BDNF-217ENST00000533131 DDX12PQ92771 950 aa8.33□□□□□ -1.08
BDNF-217ENST00000533131 SMAD5Q99717 465 aaKnown RBP8.33□□□□□ -1.08
BDNF-217ENST00000533131 TTF2Q9UNY4 1162 aaKnown RBP8.33□□□□□ -1.08
BDNF-217ENST00000533131 HNRNPMP52272 730 aaKnown RBP eCLIP8.32□□□□□ -1.08
BDNF-217ENST00000533131 FAM161AQ3B820 660 aa8.32□□□□□ -1.08
BDNF-217ENST00000533131 FRAT1Q92837 279 aaPredicted RBP8.32□□□□□ -1.08
BDNF-217ENST00000533131 PDZRN3Q9UPQ7 1066 aa8.32□□□□□ -1.08
BDNF-217ENST00000533131 EXOC5O00471 708 aa8.32□□□□□ -1.08
BDNF-217ENST00000533131 PES1O00541 588 aaKnown RBP8.32□□□□□ -1.08
BDNF-217ENST00000533131 LDHCP07864 332 aa8.32□□□□□ -1.08
BDNF-217ENST00000533131 ATF3P18847 181 aa8.32□□□□□ -1.08
BDNF-217ENST00000533131 SSR1P43307 286 aaKnown RBP8.32□□□□□ -1.08
BDNF-217ENST00000533131 STAG1Q8WVM7 1258 aa8.32□□□□□ -1.08
BDNF-217ENST00000533131 HIC1Q14526 733 aa8.32□□□□□ -1.08
BDNF-217ENST00000533131 IER2Q9BTL4 223 aa8.32□□□□□ -1.08
BDNF-217ENST00000533131 CCDC92Q53HC0 331 aaPredicted RBP8.31□□□□□ -1.08
BDNF-217ENST00000533131 USP47Q96K76 1375 aa8.31□□□□□ -1.08
BDNF-217ENST00000533131 PTPRKQ15262 1439 aa8.31□□□□□ -1.08
BDNF-217ENST00000533131 CNTLNQ9NXG0 1405 aa8.31□□□□□ -1.08
BDNF-217ENST00000533131 HDGFL2Q7Z4V5 671 aaPredicted RBP8.31□□□□□ -1.08
BDNF-217ENST00000533131 CHCHD4Q8N4Q1 142 aa8.31□□□□□ -1.08
BDNF-217ENST00000533131 OXER1Q8TDS5 423 aa8.31□□□□□ -1.08
BDNF-217ENST00000533131 SCYL1Q96KG9 808 aa8.31□□□□□ -1.08
BDNF-217ENST00000533131 NOVA2Q9UNW9 492 aaKnown RBP8.31□□□□□ -1.08
BDNF-217ENST00000533131 SLC26A4O43511 780 aa8.31□□□□□ -1.08
BDNF-217ENST00000533131 NAP1L1P55209 391 aaKnown RBP8.31□□□□□ -1.08
BDNF-217ENST00000533131 ENOX1Q8TC92 643 aaKnown RBP8.31□□□□□ -1.08
BDNF-217ENST00000533131 SRPK1Q96SB4 655 aaKnown RBP8.31□□□□□ -1.08
BDNF-217ENST00000533131 KNSTRNQ9Y448 316 aa8.31□□□□□ -1.08
BDNF-217ENST00000533131 EID1Q9Y6B2 187 aa8.31□□□□□ -1.08
BDNF-217ENST00000533131 NCOA2Q15596 1464 aa8.31□□□□□ -1.08
BDNF-217ENST00000533131 ADCY10Q96PN6 1610 aa8.31□□□□□ -1.08
BDNF-217ENST00000533131 GOLGA6L6A8MZA4 724 aa8.3□□□□□ -1.08
BDNF-217ENST00000533131 HIP1RO75146 1068 aa8.3□□□□□ -1.08
BDNF-217ENST00000533131 PUS10Q3MIT2 529 aaKnown RBP8.3□□□□□ -1.08
BDNF-217ENST00000533131 FBXO31Q5XUX0 539 aaPredicted RBP8.3□□□□□ -1.08
BDNF-217ENST00000533131 TBC1D9Q6ZT07 1266 aa8.3□□□□□ -1.08
BDNF-217ENST00000533131 RASEFQ8IZ41 740 aa8.3□□□□□ -1.08
BDNF-217ENST00000533131 CRBNQ96SW2 442 aa8.3□□□□□ -1.08
BDNF-217ENST00000533131 MKNK1Q9BUB5 465 aa8.3□□□□□ -1.08
BDNF-217ENST00000533131 TSPAN18Q96SJ8 248 aa8.3□□□□□ -1.08
BDNF-217ENST00000533131 CABP2Q9NPB3 220 aa8.3□□□□□ -1.08
BDNF-217ENST00000533131 RABGAP1Q9Y3P9 1069 aa8.3□□□□□ -1.08
BDNF-217ENST00000533131 MYOM3Q5VTT5 1437 aa8.3□□□□□ -1.08
BDNF-217ENST00000533131 RRP1P56182 461 aaKnown RBP8.3□□□□□ -1.08
BDNF-217ENST00000533131 ARID5AQ03989 594 aa8.3□□□□□ -1.08
BDNF-217ENST00000533131 ANO1Q5XXA6 986 aa8.3□□□□□ -1.08
BDNF-217ENST00000533131 LMBRD2Q68DH5 695 aaPredicted RBP8.3□□□□□ -1.08
BDNF-217ENST00000533131 DRC7Q8IY82 874 aa8.3□□□□□ -1.08
BDNF-217ENST00000533131 GPCPD1Q9NPB8 672 aa8.3□□□□□ -1.08
BDNF-217ENST00000533131 NAIPQ13075 1403 aa8.3□□□□□ -1.08
BDNF-217ENST00000533131 ATG7O95352 703 aa8.29□□□□□ -1.08
BDNF-217ENST00000533131 CCDC174Q6PII3 467 aa8.29□□□□□ -1.08
BDNF-217ENST00000533131 MAMSTRQ6ZN01 415 aa8.29□□□□□ -1.08
BDNF-217ENST00000533131 SUGP1Q8IWZ8 645 aaKnown RBP8.29□□□□□ -1.08
BDNF-217ENST00000533131 MSL3Q8N5Y2 521 aaKnown RBP8.29□□□□□ -1.08
BDNF-217ENST00000533131 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.29□□□□□ -1.08
BDNF-217ENST00000533131 NEUROD4Q9HD90 331 aa8.29□□□□□ -1.08
BDNF-217ENST00000533131 TSPY2A6NKD2 308 aa8.29□□□□□ -1.08
BDNF-217ENST00000533131 TSPY3P0CV98 308 aa8.29□□□□□ -1.08
BDNF-217ENST00000533131 TSPY8P0CW00 308 aa8.29□□□□□ -1.08
BDNF-217ENST00000533131 TSPY1Q01534 308 aa8.29□□□□□ -1.08
BDNF-217ENST00000533131 KCTD2Q14681 263 aa8.29□□□□□ -1.08
BDNF-217ENST00000533131 ARMC3Q5W041 872 aa8.29□□□□□ -1.08
BDNF-217ENST00000533131 CENPOQ9BU64 300 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms