RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 PCDH11XQ9BZA7 1347 aa28.4■■■□□ 2.14
PACSIN3-209ENST00000532457 PCDH11YQ9BZA8 1340 aa28.4■■■□□ 2.14
PACSIN3-209ENST00000532457 KRT24Q2M2I5 525 aa28.39■■■□□ 2.14
PACSIN3-209ENST00000532457 TAF7Q15545 349 aaPredicted RBP28.39■■■□□ 2.13
PACSIN3-209ENST00000532457 PKD1L3Q7Z443 1732 aa28.39■■■□□ 2.13
PACSIN3-209ENST00000532457 ELL2O00472 640 aaPredicted RBP28.38■■■□□ 2.13
PACSIN3-209ENST00000532457 DDX54Q8TDD1 881 aaKnown RBP28.38■■■□□ 2.13
PACSIN3-209ENST00000532457 VAMP4O75379 141 aa28.37■■■□□ 2.13
PACSIN3-209ENST00000532457 IFNL2Q8IZJ0 200 aa28.37■■■□□ 2.13
PACSIN3-209ENST00000532457 TSPYL4Q9UJ04 414 aa28.36■■■□□ 2.13
PACSIN3-209ENST00000532457 BRWD3Q6RI45 1802 aa28.36■■■□□ 2.13
PACSIN3-209ENST00000532457 CT47B1P0C2W7 299 aaPredicted RBP28.36■■■□□ 2.13
PACSIN3-209ENST00000532457 BCL2L13Q9BXK5 485 aa28.35■■■□□ 2.13
PACSIN3-209ENST00000532457 KDM6AO15550 1401 aaPredicted RBP28.34■■■□□ 2.13
PACSIN3-209ENST00000532457 EP400Q96L91 3159 aa28.33■■■□□ 2.13
PACSIN3-209ENST00000532457 MARCH10Q8NA82 808 aaPredicted RBP28.33■■■□□ 2.13
PACSIN3-209ENST00000532457 ADAMTS7Q9UKP4 1686 aa28.33■■■□□ 2.13
PACSIN3-209ENST00000532457 VIRMAQ69YN4 1812 aaKnown RBP28.33■■■□□ 2.13
PACSIN3-209ENST00000532457 SSH1Q8WYL5 1049 aa28.32■■■□□ 2.12
PACSIN3-209ENST00000532457 TWISTNBQ3B726 338 aaPredicted RBP28.32■■■□□ 2.12
PACSIN3-209ENST00000532457 C20orf194Q5TEA3 1177 aa28.32■■■□□ 2.12
PACSIN3-209ENST00000532457 TEFQ10587 303 aa28.31■■■□□ 2.12
PACSIN3-209ENST00000532457 SHANK3Q9BYB0 1731 aa28.31■■■□□ 2.12
PACSIN3-209ENST00000532457 KCNQ3O43525 872 aa28.3■■■□□ 2.12
PACSIN3-209ENST00000532457 HSP90AB1P08238 724 aaKnown RBP28.3■■■□□ 2.12
PACSIN3-209ENST00000532457 BABAM1Q9NWV8 329 aa28.3■■■□□ 2.12
PACSIN3-209ENST00000532457 FAM196AQ6ZSG2 479 aa28.29■■■□□ 2.12
PACSIN3-209ENST00000532457 DCAF5Q96JK2 942 aa28.29■■■□□ 2.12
PACSIN3-209ENST00000532457 SCN11AQ9UI33 1791 aa28.27■■■□□ 2.12
PACSIN3-209ENST00000532457 NKX1-1Q15270 411 aaPredicted RBP28.27■■■□□ 2.12
PACSIN3-209ENST00000532457 BTBD11A6QL63 1104 aa28.26■■■□□ 2.11
PACSIN3-209ENST00000532457 TCERG1O14776 1098 aaKnown RBP28.26■■■□□ 2.11
PACSIN3-209ENST00000532457 NFATC2IPQ8NCF5 419 aa28.26■■■□□ 2.11
PACSIN3-209ENST00000532457 SLC52A2Q9HAB3 445 aa28.26■■■□□ 2.11
PACSIN3-209ENST00000532457 FAM182BQ5T319 152 aa28.25■■■□□ 2.11
PACSIN3-209ENST00000532457 BCL9O00512 1426 aa28.25■■■□□ 2.11
PACSIN3-209ENST00000532457 SMC4Q9NTJ3 1288 aa28.25■■■□□ 2.11
PACSIN3-209ENST00000532457 SIPA1L3O60292 1781 aaPredicted RBP28.24■■■□□ 2.11
PACSIN3-209ENST00000532457 ALDH1L2Q3SY69 923 aa28.24■■■□□ 2.11
PACSIN3-209ENST00000532457 FRAT1Q92837 279 aaPredicted RBP28.24■■■□□ 2.11
PACSIN3-209ENST00000532457 TNNQ9UQP3 1299 aa28.24■■■□□ 2.11
PACSIN3-209ENST00000532457 EIF4A1P60842 406 aaKnown RBP28.22■■■□□ 2.11
PACSIN3-209ENST00000532457 ZNF428Q96B54 188 aa28.22■■■□□ 2.11
PACSIN3-209ENST00000532457 MRPL50Q8N5N7 158 aaKnown RBP28.22■■■□□ 2.11
PACSIN3-209ENST00000532457 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.21■■■□□ 2.11
PACSIN3-209ENST00000532457 EXOC6Q8TAG9 804 aa28.21■■■□□ 2.11
PACSIN3-209ENST00000532457 KDM3BQ7LBC6 1761 aa28.21■■■□□ 2.11
PACSIN3-209ENST00000532457 SLC39A6Q13433 755 aa28.2■■■□□ 2.1
PACSIN3-209ENST00000532457 NOB1Q9ULX3 412 aaKnown RBP28.19■■■□□ 2.1
PACSIN3-209ENST00000532457 CRBNQ96SW2 442 aa28.18■■■□□ 2.1
PACSIN3-209ENST00000532457 BRPF1P55201 1214 aaPredicted RBP28.18■■■□□ 2.1
PACSIN3-209ENST00000532457 ERICH6BQ5W0A0 696 aa28.18■■■□□ 2.1
PACSIN3-209ENST00000532457 ILDR2Q71H61 639 aa28.18■■■□□ 2.1
PACSIN3-209ENST00000532457 MRC1P22897 1456 aa28.17■■■□□ 2.1
PACSIN3-209ENST00000532457 CABP4P57796 275 aa28.17■■■□□ 2.1
PACSIN3-209ENST00000532457 KAT6BQ8WYB5 2073 aa28.17■■■□□ 2.1
PACSIN3-209ENST00000532457 ERVV-2B6SEH9 535 aa28.16■■■□□ 2.1
PACSIN3-209ENST00000532457 RLBP1P12271 317 aa28.15■■■□□ 2.1
PACSIN3-209ENST00000532457 PANK1Q8TE04 598 aa28.15■■■□□ 2.1
PACSIN3-209ENST00000532457 SYTL4Q96C24 671 aaPredicted RBP28.15■■■□□ 2.1
PACSIN3-209ENST00000532457 ACSBG1Q96GR2 724 aa28.15■■■□□ 2.1
PACSIN3-209ENST00000532457 CANXP27824 592 aaKnown RBP28.14■■■□□ 2.1
PACSIN3-209ENST00000532457 ZNF790Q6PG37 636 aa28.14■■■□□ 2.1
PACSIN3-209ENST00000532457 HEG1Q9ULI3 1381 aa28.13■■■□□ 2.09
PACSIN3-209ENST00000532457 PDE3AQ14432 1141 aa28.13■■■□□ 2.09
PACSIN3-209ENST00000532457 PRIM1P49642 420 aaKnown RBP28.13■■■□□ 2.09
PACSIN3-209ENST00000532457 ZKSCAN2Q63HK3 967 aa28.13■■■□□ 2.09
PACSIN3-209ENST00000532457 DOT1LQ8TEK3 1739 aa28.12■■■□□ 2.09
PACSIN3-209ENST00000532457 CLUAP1Q96AJ1 413 aa28.12■■■□□ 2.09
PACSIN3-209ENST00000532457 SBF2Q86WG5 1849 aa28.11■■■□□ 2.09
PACSIN3-209ENST00000532457 PRAMEF22A3QJZ6 481 aa28.11■■■□□ 2.09
PACSIN3-209ENST00000532457 TRIM27P14373 513 aa28.11■■■□□ 2.09
PACSIN3-209ENST00000532457 NECTIN2Q92692 538 aa28.11■■■□□ 2.09
PACSIN3-209ENST00000532457 BCL11BQ9C0K0 894 aaPredicted RBP28.11■■■□□ 2.09
PACSIN3-209ENST00000532457 TOGARAM1Q9Y4F4 1720 aa28.11■■■□□ 2.09
PACSIN3-209ENST00000532457 TRIM37O94972 964 aa28.11■■■□□ 2.09
PACSIN3-209ENST00000532457 TMOD3Q9NYL9 352 aa28.11■■■□□ 2.09
PACSIN3-209ENST00000532457 GIGYF1O75420 1035 aaPredicted RBP28.1■■■□□ 2.09
PACSIN3-209ENST00000532457 KCNQ2O43526 872 aa28.09■■■□□ 2.09
PACSIN3-209ENST00000532457 ATF7IPQ6VMQ6 1270 aa28.09■■■□□ 2.09
PACSIN3-209ENST00000532457 NHSQ6T4R5 1651 aa28.09■■■□□ 2.09
PACSIN3-209ENST00000532457 SLC4A2P04920 1241 aa28.08■■■□□ 2.09
PACSIN3-209ENST00000532457 PPP4R2Q9NY27 417 aa28.08■■■□□ 2.09
PACSIN3-209ENST00000532457 CCDC125Q86Z20 511 aa28.08■■■□□ 2.09
PACSIN3-209ENST00000532457 ZNF496Q96IT1 587 aaPredicted RBP28.08■■■□□ 2.09
PACSIN3-209ENST00000532457 COG6Q9Y2V7 657 aa28.08■■■□□ 2.09
PACSIN3-209ENST00000532457 SOS1Q07889 1333 aaPredicted RBP28.07■■■□□ 2.08
PACSIN3-209ENST00000532457 KIF16BQ96L93 1317 aa28.07■■■□□ 2.08
PACSIN3-209ENST00000532457 SF3B2Q13435 895 aaKnown RBP28.06■■■□□ 2.08
PACSIN3-209ENST00000532457 G2E3Q7L622 706 aa28.06■■■□□ 2.08
PACSIN3-209ENST00000532457 PIGBQ92521 554 aa28.06■■■□□ 2.08
PACSIN3-209ENST00000532457 IPO8O15397 1037 aaKnown RBP28.06■■■□□ 2.08
PACSIN3-209ENST00000532457 EIF2S2P20042 333 aaKnown RBP28.06■■■□□ 2.08
PACSIN3-209ENST00000532457 CCDC30Q5VVM6 783 aa28.06■■■□□ 2.08
PACSIN3-209ENST00000532457 ITGB4P16144 1822 aa28.06■■■□□ 2.08
PACSIN3-209ENST00000532457 HOXB7P09629 217 aa28.05■■■□□ 2.08
PACSIN3-209ENST00000532457 DZIP1LQ8IYY4 767 aaKnown RBP28.05■■■□□ 2.08
PACSIN3-209ENST00000532457 HDGFL1Q5TGJ6 251 aa28.04■■■□□ 2.08
PACSIN3-209ENST00000532457 ARHGAP45Q92619 1136 aa28.04■■■□□ 2.08
PACSIN3-209ENST00000532457 B4GALNT3Q6L9W6 998 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms