RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 MTFR1LQ9H019 292 aa20.83■□□□□ 0.93
CTSB-225ENST00000532409 C4BP0C0L5 1744 aa20.83■□□□□ 0.92
CTSB-225ENST00000532409 PPP1R1BQ9UD71 204 aaPredicted RBP20.82■□□□□ 0.92
CTSB-225ENST00000532409 VIRMAQ69YN4 1812 aaKnown RBP20.82■□□□□ 0.92
CTSB-225ENST00000532409 U2AF1L5P0DN76 240 aaPredicted RBP20.81■□□□□ 0.92
CTSB-225ENST00000532409 PRKAR2BP31323 418 aa20.81■□□□□ 0.92
CTSB-225ENST00000532409 U2AF1Q01081 240 aaKnown RBP eCLIP20.81■□□□□ 0.92
CTSB-225ENST00000532409 COL23A1Q86Y22 540 aaPredicted RBP20.81■□□□□ 0.92
CTSB-225ENST00000532409 PHACTR3Q96KR7 559 aa20.81■□□□□ 0.92
CTSB-225ENST00000532409 SGIP1Q9BQI5 828 aa20.81■□□□□ 0.92
CTSB-225ENST00000532409 RSPH6AQ9H0K4 717 aa20.81■□□□□ 0.92
CTSB-225ENST00000532409 RNMTO43148 476 aaKnown RBP20.8■□□□□ 0.92
CTSB-225ENST00000532409 ATP6V1AP38606 617 aa20.8■□□□□ 0.92
CTSB-225ENST00000532409 RBM42Q9BTD8 480 aaKnown RBP20.8■□□□□ 0.92
CTSB-225ENST00000532409 MSH5O43196 834 aa20.79■□□□□ 0.92
CTSB-225ENST00000532409 ADAMTS7Q9UKP4 1686 aa20.78■□□□□ 0.92
CTSB-225ENST00000532409 PTCD1O75127 700 aaKnown RBP20.78■□□□□ 0.92
CTSB-225ENST00000532409 ZEB1P37275 1124 aaPredicted RBP20.78■□□□□ 0.92
CTSB-225ENST00000532409 AK7Q96M32 723 aa20.78■□□□□ 0.92
CTSB-225ENST00000532409 NUDCQ9Y266 331 aa20.78■□□□□ 0.92
CTSB-225ENST00000532409 MRC1P22897 1456 aa20.77■□□□□ 0.92
CTSB-225ENST00000532409 SLC52A2Q9HAB3 445 aa20.77■□□□□ 0.92
CTSB-225ENST00000532409 UBR3Q6ZT12 1888 aa20.77■□□□□ 0.92
CTSB-225ENST00000532409 PHF14O94880 888 aa20.76■□□□□ 0.91
CTSB-225ENST00000532409 MAP3K5Q99683 1374 aa20.75■□□□□ 0.91
CTSB-225ENST00000532409 SLC39A6Q13433 755 aa20.75■□□□□ 0.91
CTSB-225ENST00000532409 MSL1Q68DK7 614 aa20.75■□□□□ 0.91
CTSB-225ENST00000532409 GAS2L2Q8NHY3 880 aa20.75■□□□□ 0.91
CTSB-225ENST00000532409 IL17REQ8NFR9 667 aa20.74■□□□□ 0.91
CTSB-225ENST00000532409 SLC16A10Q8TF71 515 aa20.74■□□□□ 0.91
CTSB-225ENST00000532409 COL5A3P25940 1745 aaPredicted RBP20.73■□□□□ 0.91
CTSB-225ENST00000532409 COL24A1Q17RW2 1714 aa20.73■□□□□ 0.91
CTSB-225ENST00000532409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.73■□□□□ 0.91
CTSB-225ENST00000532409 GNPATO15228 680 aa20.73■□□□□ 0.91
CTSB-225ENST00000532409 RALBP1Q15311 655 aa20.73■□□□□ 0.91
CTSB-225ENST00000532409 GNAT3A8MTJ3 354 aa20.72■□□□□ 0.91
CTSB-225ENST00000532409 FCHSD2O94868 740 aa20.72■□□□□ 0.91
CTSB-225ENST00000532409 ARXQ96QS3 562 aa20.72■□□□□ 0.91
CTSB-225ENST00000532409 FHDC1Q9C0D6 1143 aaPredicted RBP20.72■□□□□ 0.91
CTSB-225ENST00000532409 ZNF831Q5JPB2 1677 aa20.72■□□□□ 0.91
CTSB-225ENST00000532409 TJP1Q07157 1748 aa20.72■□□□□ 0.91
CTSB-225ENST00000532409 MYH14Q7Z406 1995 aaKnown RBP20.7■□□□□ 0.9
CTSB-225ENST00000532409 KCPQ6ZWJ8 1503 aa20.69■□□□□ 0.9
CTSB-225ENST00000532409 SIPA1L3O60292 1781 aaPredicted RBP20.68■□□□□ 0.9
CTSB-225ENST00000532409 SSFA2P28290 1259 aa20.68■□□□□ 0.9
CTSB-225ENST00000532409 POLD1P28340 1107 aa20.68■□□□□ 0.9
CTSB-225ENST00000532409 DNAJC10Q8IXB1 793 aa20.68■□□□□ 0.9
CTSB-225ENST00000532409 FLAD1Q8NFF5 587 aa20.68■□□□□ 0.9
CTSB-225ENST00000532409 HMGB2P26583 209 aaKnown RBP20.67■□□□□ 0.9
CTSB-225ENST00000532409 DCTN1Q14203 1278 aa20.67■□□□□ 0.9
CTSB-225ENST00000532409 KLHL34Q8N239 644 aa20.67■□□□□ 0.9
CTSB-225ENST00000532409 SYT17Q9BSW7 474 aa20.67■□□□□ 0.9
CTSB-225ENST00000532409 MYBBP1AQ9BQG0 1328 aaKnown RBP20.67■□□□□ 0.9
CTSB-225ENST00000532409 CNTNAP4Q9C0A0 1308 aa20.67■□□□□ 0.9
CTSB-225ENST00000532409 TEFQ10587 303 aa20.66■□□□□ 0.9
CTSB-225ENST00000532409 MCM10Q7L590 875 aa20.66■□□□□ 0.9
CTSB-225ENST00000532409 CEMIPQ8WUJ3 1361 aa20.66■□□□□ 0.9
CTSB-225ENST00000532409 UBR2Q8IWV8 1755 aa20.65■□□□□ 0.9
CTSB-225ENST00000532409 CICQ96RK0 1608 aaPredicted RBP20.65■□□□□ 0.9
CTSB-225ENST00000532409 CRKLP46109 303 aaKnown RBP20.65■□□□□ 0.9
CTSB-225ENST00000532409 PLEKHF1Q96S99 279 aa20.65■□□□□ 0.9
CTSB-225ENST00000532409 RTCBQ9Y3I0 505 aaKnown RBP20.65■□□□□ 0.9
CTSB-225ENST00000532409 KCNQ3O43525 872 aa20.64■□□□□ 0.89
CTSB-225ENST00000532409 RC3H1Q5TC82 1133 aaKnown RBP20.64■□□□□ 0.89
CTSB-225ENST00000532409 INTS5Q6P9B9 1019 aaKnown RBP20.63■□□□□ 0.89
CTSB-225ENST00000532409 PRKRIP1Q9H875 184 aaPredicted RBP20.63■□□□□ 0.89
CTSB-225ENST00000532409 RPS6KA4O75676 772 aa20.62■□□□□ 0.89
CTSB-225ENST00000532409 TRAPPC3LQ5T215 181 aa20.62■□□□□ 0.89
CTSB-225ENST00000532409 ARHGEF1Q92888 912 aaKnown RBP20.62■□□□□ 0.89
CTSB-225ENST00000532409 ZNF496Q96IT1 587 aaPredicted RBP20.62■□□□□ 0.89
CTSB-225ENST00000532409 DLG5Q8TDM6 1919 aa20.62■□□□□ 0.89
CTSB-225ENST00000532409 C4AP0C0L4 1744 aa20.61■□□□□ 0.89
CTSB-225ENST00000532409 ZNF790Q6PG37 636 aa20.61■□□□□ 0.89
CTSB-225ENST00000532409 RTF1Q92541 710 aaKnown RBP20.61■□□□□ 0.89
CTSB-225ENST00000532409 CYP19A1P11511 503 aaPredicted RBP20.6■□□□□ 0.89
CTSB-225ENST00000532409 TTC5Q8N0Z6 440 aa20.6■□□□□ 0.89
CTSB-225ENST00000532409 NLGN2Q8NFZ4 835 aa20.6■□□□□ 0.89
CTSB-225ENST00000532409 UTRNP46939 3433 aa20.6■□□□□ 0.89
CTSB-225ENST00000532409 ZNF316A6NFI3 1004 aaPredicted RBP20.59■□□□□ 0.89
CTSB-225ENST00000532409 BTBD11A6QL63 1104 aa20.59■□□□□ 0.89
CTSB-225ENST00000532409 THUMPD2Q9BTF0 503 aaKnown RBP20.59■□□□□ 0.89
CTSB-225ENST00000532409 CCDC87Q9NVE4 849 aa20.59■□□□□ 0.89
CTSB-225ENST00000532409 SRP68Q9UHB9 627 aaKnown RBP20.58■□□□□ 0.89
CTSB-225ENST00000532409 ZBTB1Q9Y2K1 713 aa20.58■□□□□ 0.89
CTSB-225ENST00000532409 GOLGB1Q14789 3259 aaKnown RBP20.57■□□□□ 0.88
CTSB-225ENST00000532409 NEFMP07197 916 aa20.57■□□□□ 0.88
CTSB-225ENST00000532409 ADRA2BP18089 450 aa20.57■□□□□ 0.88
CTSB-225ENST00000532409 RFC4P35249 363 aa20.57■□□□□ 0.88
CTSB-225ENST00000532409 NFE2L2Q16236 605 aa20.57■□□□□ 0.88
CTSB-225ENST00000532409 CCDC146Q8IYE0 955 aa20.57■□□□□ 0.88
CTSB-225ENST00000532409 VSIG10Q8N0Z9 540 aa20.57■□□□□ 0.88
CTSB-225ENST00000532409 HEG1Q9ULI3 1381 aa20.57■□□□□ 0.88
CTSB-225ENST00000532409 MAPK8IP3Q9UPT6 1336 aa20.56■□□□□ 0.88
CTSB-225ENST00000532409 MIS18AQ9NYP9 233 aa20.56■□□□□ 0.88
CTSB-225ENST00000532409 SOS1Q07889 1333 aaPredicted RBP20.55■□□□□ 0.88
CTSB-225ENST00000532409 HTATSF1O43719 755 aaKnown RBP20.55■□□□□ 0.88
CTSB-225ENST00000532409 MMP10P09238 476 aa20.55■□□□□ 0.88
CTSB-225ENST00000532409 GYS1P13807 737 aa20.55■□□□□ 0.88
CTSB-225ENST00000532409 PRAMEF22A3QJZ6 481 aa20.54■□□□□ 0.88
CTSB-225ENST00000532409 CANXP27824 592 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms