RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 IL2RBP14784 551 aa16.59■□□□□ 0.25
COPB1-208ENST00000532088 AEBP1Q8IUX7 1158 aa16.59■□□□□ 0.25
COPB1-208ENST00000532088 PLEKHF1Q96S99 279 aa16.59■□□□□ 0.25
COPB1-208ENST00000532088 CCDC9Q9Y3X0 531 aaKnown RBP16.59■□□□□ 0.25
COPB1-208ENST00000532088 OVOS2A0A0G2JMS6 1433 aa16.59■□□□□ 0.25
COPB1-208ENST00000532088 NEFMP07197 916 aa16.58■□□□□ 0.24
COPB1-208ENST00000532088 HMOX1P09601 288 aa16.58■□□□□ 0.24
COPB1-208ENST00000532088 TATP17735 454 aaPredicted RBP16.58■□□□□ 0.24
COPB1-208ENST00000532088 RBM6P78332 1123 aaKnown RBP16.58■□□□□ 0.24
COPB1-208ENST00000532088 AMOTQ4VCS5 1084 aa16.58■□□□□ 0.24
COPB1-208ENST00000532088 ASTLQ6HA08 431 aaPredicted RBP16.58■□□□□ 0.24
COPB1-208ENST00000532088 USHBP1Q8N6Y0 703 aa16.58■□□□□ 0.24
COPB1-208ENST00000532088 RGS17Q9UGC6 210 aaPredicted RBP16.58■□□□□ 0.24
COPB1-208ENST00000532088 MEGF6O75095 1541 aa16.58■□□□□ 0.24
COPB1-208ENST00000532088 PKD1L3Q7Z443 1732 aa16.57■□□□□ 0.24
COPB1-208ENST00000532088 THSD7AQ9UPZ6 1657 aa16.57■□□□□ 0.24
COPB1-208ENST00000532088 PRKAR2BP31323 418 aa16.57■□□□□ 0.24
COPB1-208ENST00000532088 PLCB2Q00722 1185 aa16.57■□□□□ 0.24
COPB1-208ENST00000532088 RUNDC1Q96C34 613 aa16.57■□□□□ 0.24
COPB1-208ENST00000532088 ATMINO43313 823 aaPredicted RBP16.56■□□□□ 0.24
COPB1-208ENST00000532088 PLEKHO1Q53GL0 409 aaPredicted RBP16.55■□□□□ 0.24
COPB1-208ENST00000532088 FAM9BQ8IZU0 186 aa16.55■□□□□ 0.24
COPB1-208ENST00000532088 EFCAB3Q8N7B9 438 aa16.55■□□□□ 0.24
COPB1-208ENST00000532088 USP35Q9P2H5 1018 aa16.55■□□□□ 0.24
COPB1-208ENST00000532088 TNS2Q63HR2 1409 aa16.54■□□□□ 0.24
COPB1-208ENST00000532088 MAPK8IP3Q9UPT6 1336 aa16.54■□□□□ 0.24
COPB1-208ENST00000532088 NGEFQ8N5V2 710 aa16.54■□□□□ 0.24
COPB1-208ENST00000532088 GAS2L2Q8NHY3 880 aa16.54■□□□□ 0.24
COPB1-208ENST00000532088 SPG7Q9UQ90 795 aa16.54■□□□□ 0.24
COPB1-208ENST00000532088 RXRBP28702 533 aa16.53■□□□□ 0.24
COPB1-208ENST00000532088 ATN1P54259 1190 aaPredicted RBP16.53■□□□□ 0.24
COPB1-208ENST00000532088 SPRYD3Q8NCJ5 442 aa16.53■□□□□ 0.24
COPB1-208ENST00000532088 LRRC37A3O60309 1634 aa16.52■□□□□ 0.24
COPB1-208ENST00000532088 FAM98CQ17RN3 349 aaKnown RBP16.52■□□□□ 0.24
COPB1-208ENST00000532088 PAXIP1Q6ZW49 1069 aaPredicted RBP16.52■□□□□ 0.24
COPB1-208ENST00000532088 ZCRB1Q8TBF4 217 aaKnown RBP16.52■□□□□ 0.24
COPB1-208ENST00000532088 DCBLD2Q96PD2 775 aa16.52■□□□□ 0.24
COPB1-208ENST00000532088 TRIM35Q9UPQ4 493 aa16.52■□□□□ 0.24
COPB1-208ENST00000532088 PCDH11XQ9BZA7 1347 aa16.51■□□□□ 0.23
COPB1-208ENST00000532088 PCDH11YQ9BZA8 1340 aa16.51■□□□□ 0.23
COPB1-208ENST00000532088 EXOC5O00471 708 aa16.51■□□□□ 0.23
COPB1-208ENST00000532088 GOLGA2Q08379 1002 aa16.51■□□□□ 0.23
COPB1-208ENST00000532088 POTEAQ6S8J7 498 aa16.51■□□□□ 0.23
COPB1-208ENST00000532088 GTPBP6O43824 516 aaPredicted RBP16.5■□□□□ 0.23
COPB1-208ENST00000532088 DDB1Q16531 1140 aa16.5■□□□□ 0.23
COPB1-208ENST00000532088 PHACTR3Q96KR7 559 aa16.5■□□□□ 0.23
COPB1-208ENST00000532088 SHANK3Q9BYB0 1731 aa16.5■□□□□ 0.23
COPB1-208ENST00000532088 HTATSF1O43719 755 aaKnown RBP16.49■□□□□ 0.23
COPB1-208ENST00000532088 NFE2L2Q16236 605 aa16.49■□□□□ 0.23
COPB1-208ENST00000532088 MTHFSDQ2M296 383 aaKnown RBP16.49■□□□□ 0.23
COPB1-208ENST00000532088 AKAP4Q5JQC9 854 aa16.49■□□□□ 0.23
COPB1-208ENST00000532088 HSP90AB1P08238 724 aaKnown RBP16.48■□□□□ 0.23
COPB1-208ENST00000532088 TMPOP42166 694 aaKnown RBP16.48■□□□□ 0.23
COPB1-208ENST00000532088 CCDC146Q8IYE0 955 aa16.48■□□□□ 0.23
COPB1-208ENST00000532088 SEPT12Q8IYM1 358 aa16.48■□□□□ 0.23
COPB1-208ENST00000532088 IFNL2Q8IZJ0 200 aa16.48■□□□□ 0.23
COPB1-208ENST00000532088 MFRPQ9BY79 579 aa16.48■□□□□ 0.23
COPB1-208ENST00000532088 BCL9O00512 1426 aa16.47■□□□□ 0.23
COPB1-208ENST00000532088 PHKG2P15735 406 aa16.47■□□□□ 0.23
COPB1-208ENST00000532088 LMOD3Q0VAK6 560 aa16.47■□□□□ 0.23
COPB1-208ENST00000532088 CCDC27Q2M243 656 aa16.47■□□□□ 0.23
COPB1-208ENST00000532088 C1orf141Q5JVX7 400 aa16.47■□□□□ 0.23
COPB1-208ENST00000532088 ZNF530Q6P9A1 599 aaPredicted RBP16.47■□□□□ 0.23
COPB1-208ENST00000532088 CFAP44Q96MT7 982 aa16.47■□□□□ 0.23
COPB1-208ENST00000532088 RYDENQ9NUL5 291 aaKnown RBP16.47■□□□□ 0.23
COPB1-208ENST00000532088 MAP3K5Q99683 1374 aa16.47■□□□□ 0.23
COPB1-208ENST00000532088 ADAMTS7Q9UKP4 1686 aa16.46■□□□□ 0.23
COPB1-208ENST00000532088 APAF1O14727 1248 aa16.46■□□□□ 0.23
COPB1-208ENST00000532088 MKRN3Q13064 507 aaKnown RBP16.46■□□□□ 0.23
COPB1-208ENST00000532088 RGS12O14924 1447 aa16.45■□□□□ 0.22
COPB1-208ENST00000532088 GNAT3A8MTJ3 354 aa16.45■□□□□ 0.22
COPB1-208ENST00000532088 CYP27B1O15528 508 aa16.45■□□□□ 0.22
COPB1-208ENST00000532088 POTEIP0CG38 1075 aa16.44■□□□□ 0.22
COPB1-208ENST00000532088 PDE3BQ13370 1112 aa16.44■□□□□ 0.22
COPB1-208ENST00000532088 A0A0G2JS52 829 aa16.43■□□□□ 0.22
COPB1-208ENST00000532088 RIPK4P57078 832 aa16.43■□□□□ 0.22
COPB1-208ENST00000532088 MYT1Q01538 1121 aa16.43■□□□□ 0.22
COPB1-208ENST00000532088 DCAF5Q96JK2 942 aa16.43■□□□□ 0.22
COPB1-208ENST00000532088 CEMIPQ8WUJ3 1361 aa16.42■□□□□ 0.22
COPB1-208ENST00000532088 MARCH10Q8NA82 808 aaPredicted RBP16.42■□□□□ 0.22
COPB1-208ENST00000532088 FBXO22Q8NEZ5 403 aa16.42■□□□□ 0.22
COPB1-208ENST00000532088 DDX54Q8TDD1 881 aaKnown RBP16.42■□□□□ 0.22
COPB1-208ENST00000532088 RTF1Q92541 710 aaKnown RBP16.42■□□□□ 0.22
COPB1-208ENST00000532088 DLG5Q8TDM6 1919 aa16.42■□□□□ 0.22
COPB1-208ENST00000532088 KRT27Q7Z3Y8 459 aa16.41■□□□□ 0.22
COPB1-208ENST00000532088 PELP1Q8IZL8 1130 aaKnown RBP16.41■□□□□ 0.22
COPB1-208ENST00000532088 MRC1P22897 1456 aa16.41■□□□□ 0.22
COPB1-208ENST00000532088 BRWD3Q6RI45 1802 aa16.4■□□□□ 0.22
COPB1-208ENST00000532088 KDM6AO15550 1401 aaPredicted RBP16.4■□□□□ 0.22
COPB1-208ENST00000532088 IER5LQ5T953 404 aa16.4■□□□□ 0.22
COPB1-208ENST00000532088 SCN11AQ9UI33 1791 aa16.4■□□□□ 0.22
COPB1-208ENST00000532088 ERVV-2B6SEH9 535 aa16.39■□□□□ 0.21
COPB1-208ENST00000532088 RNMTO43148 476 aaKnown RBP16.39■□□□□ 0.21
COPB1-208ENST00000532088 CALD1Q05682 793 aaKnown RBP16.39■□□□□ 0.21
COPB1-208ENST00000532088 WWC1Q8IX03 1113 aa16.38■□□□□ 0.21
COPB1-208ENST00000532088 IL17REQ8NFR9 667 aa16.38■□□□□ 0.21
COPB1-208ENST00000532088 RRP7AQ9Y3A4 280 aaKnown RBP16.38■□□□□ 0.21
COPB1-208ENST00000532088 ZNF521Q96K83 1311 aa16.38■□□□□ 0.21
COPB1-208ENST00000532088 HNRNPUQ00839 825 aaKnown RBP eCLIP16.37■□□□□ 0.21
COPB1-208ENST00000532088 NEUROD2Q15784 382 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms