RNA–Protein interactions for RNA: ENST00000531428.1

PIK3C2A-203, Transcript of phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha, humanhuman

TSL 1 (best)

Gene PIK3C2A, Length 1,593 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2A-203ENST00000531428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.33■□□□□ 0.842e-7■■□□□ 12.8
PIK3C2A-203ENST00000531428 DLG5Q8TDM6 1919 aa20.32■□□□□ 0.84
PIK3C2A-203ENST00000531428 TRIM37O94972 964 aa20.32■□□□□ 0.84
PIK3C2A-203ENST00000531428 ALDH1L2Q3SY69 923 aa20.32■□□□□ 0.84
PIK3C2A-203ENST00000531428 AKAP4Q5JQC9 854 aa20.31■□□□□ 0.84
PIK3C2A-203ENST00000531428 DDX54Q8TDD1 881 aaKnown RBP20.31■□□□□ 0.84
PIK3C2A-203ENST00000531428 RGPD2P0DJD1 1756 aa20.31■□□□□ 0.84
PIK3C2A-203ENST00000531428 BRPF1P55201 1214 aaPredicted RBP20.3■□□□□ 0.84
PIK3C2A-203ENST00000531428 VAMP4O75379 141 aa20.29■□□□□ 0.84
PIK3C2A-203ENST00000531428 IL17REQ8NFR9 667 aa20.29■□□□□ 0.84
PIK3C2A-203ENST00000531428 APBA3O96018 575 aa20.28■□□□□ 0.84
PIK3C2A-203ENST00000531428 MS4A1P11836 297 aa20.28■□□□□ 0.84
PIK3C2A-203ENST00000531428 ZNF530Q6P9A1 599 aaPredicted RBP20.28■□□□□ 0.84
PIK3C2A-203ENST00000531428 EXOC6Q8TAG9 804 aa20.28■□□□□ 0.84
PIK3C2A-203ENST00000531428 SPG7Q9UQ90 795 aa20.28■□□□□ 0.84
PIK3C2A-203ENST00000531428 CEMIPQ8WUJ3 1361 aa20.28■□□□□ 0.84
PIK3C2A-203ENST00000531428 BCL9O00512 1426 aa20.27■□□□□ 0.84
PIK3C2A-203ENST00000531428 MEGF6O75095 1541 aa20.27■□□□□ 0.84
PIK3C2A-203ENST00000531428 TAF7Q15545 349 aaPredicted RBP20.27■□□□□ 0.84
PIK3C2A-203ENST00000531428 SSH1Q8WYL5 1049 aa20.27■□□□□ 0.84
PIK3C2A-203ENST00000531428 CANXP27824 592 aaKnown RBP20.26■□□□□ 0.83
PIK3C2A-203ENST00000531428 C1orf141Q5JVX7 400 aa20.26■□□□□ 0.83
PIK3C2A-203ENST00000531428 C20orf194Q5TEA3 1177 aa20.26■□□□□ 0.83
PIK3C2A-203ENST00000531428 PELP1Q8IZL8 1130 aaKnown RBP20.26■□□□□ 0.83
PIK3C2A-203ENST00000531428 SMC4Q9NTJ3 1288 aa20.26■□□□□ 0.83
PIK3C2A-203ENST00000531428 PCDH11XQ9BZA7 1347 aa20.26■□□□□ 0.83
PIK3C2A-203ENST00000531428 PCDH11YQ9BZA8 1340 aa20.26■□□□□ 0.83
PIK3C2A-203ENST00000531428 TWISTNBQ3B726 338 aaPredicted RBP20.25■□□□□ 0.83
PIK3C2A-203ENST00000531428 DEFB132Q7Z7B7 95 aa20.25■□□□□ 0.83
PIK3C2A-203ENST00000531428 CRBNQ96SW2 442 aa20.25■□□□□ 0.83
PIK3C2A-203ENST00000531428 BCL11BQ9C0K0 894 aaPredicted RBP20.25■□□□□ 0.83
PIK3C2A-203ENST00000531428 IPO8O15397 1037 aaKnown RBP20.25■□□□□ 0.83
PIK3C2A-203ENST00000531428 C8orf58Q8NAV2 365 aa20.25■□□□□ 0.83
PIK3C2A-203ENST00000531428 TSPYL4Q9UJ04 414 aa20.25■□□□□ 0.83
PIK3C2A-203ENST00000531428 ZKSCAN2Q63HK3 967 aa20.24■□□□□ 0.83
PIK3C2A-203ENST00000531428 FRAT1Q92837 279 aaPredicted RBP20.24■□□□□ 0.83
PIK3C2A-203ENST00000531428 SOS1Q07889 1333 aaPredicted RBP20.24■□□□□ 0.83
PIK3C2A-203ENST00000531428 KIF16BQ96L93 1317 aa20.24■□□□□ 0.83
PIK3C2A-203ENST00000531428 AAMPQ13685 434 aa20.23■□□□□ 0.83
PIK3C2A-203ENST00000531428 TSPYL6Q8N831 410 aa20.23■□□□□ 0.83
PIK3C2A-203ENST00000531428 CCDC136Q96JN2 1154 aa20.23■□□□□ 0.83
PIK3C2A-203ENST00000531428 EN1Q05925 392 aaPredicted RBP20.21■□□□□ 0.83
PIK3C2A-203ENST00000531428 ACSBG1Q96GR2 724 aa20.21■□□□□ 0.83
PIK3C2A-203ENST00000531428 BCL2L13Q9BXK5 485 aa20.21■□□□□ 0.83
PIK3C2A-203ENST00000531428 ARHGAP45Q92619 1136 aa20.21■□□□□ 0.83
PIK3C2A-203ENST00000531428 KAT6BQ8WYB5 2073 aa20.2■□□□□ 0.82
PIK3C2A-203ENST00000531428 RNMTO43148 476 aaKnown RBP20.2■□□□□ 0.82
PIK3C2A-203ENST00000531428 B4GALNT3Q6L9W6 998 aa20.2■□□□□ 0.82
PIK3C2A-203ENST00000531428 SYTL4Q96C24 671 aaPredicted RBP20.2■□□□□ 0.82
PIK3C2A-203ENST00000531428 LGR6Q9HBX8 967 aa20.2■□□□□ 0.82
PIK3C2A-203ENST00000531428 TEFQ10587 303 aa20.19■□□□□ 0.82
PIK3C2A-203ENST00000531428 ATF7IPQ6VMQ6 1270 aa20.19■□□□□ 0.82
PIK3C2A-203ENST00000531428 MRPL50Q8N5N7 158 aaKnown RBP20.19■□□□□ 0.82
PIK3C2A-203ENST00000531428 ELL2O00472 640 aaPredicted RBP20.18■□□□□ 0.82
PIK3C2A-203ENST00000531428 IFNL2Q8IZJ0 200 aa20.18■□□□□ 0.82
PIK3C2A-203ENST00000531428 MIS18AQ9NYP9 233 aa20.18■□□□□ 0.82
PIK3C2A-203ENST00000531428 HSP90AB1P08238 724 aaKnown RBP20.17■□□□□ 0.82
PIK3C2A-203ENST00000531428 MPRIPQ6WCQ1 1025 aa20.17■□□□□ 0.82
PIK3C2A-203ENST00000531428 CHMP4AQ9BY43 222 aa20.17■□□□□ 0.82
PIK3C2A-203ENST00000531428 NOB1Q9ULX3 412 aaKnown RBP20.17■□□□□ 0.82
PIK3C2A-203ENST00000531428 TNS1Q9HBL0 1735 aaKnown RBP20.17■□□□□ 0.82
PIK3C2A-203ENST00000531428 SBF2Q86WG5 1849 aa20.17■□□□□ 0.82
PIK3C2A-203ENST00000531428 PLSCR1O15162 318 aa20.17■□□□□ 0.82
PIK3C2A-203ENST00000531428 KCNQ2O43526 872 aa20.17■□□□□ 0.82
PIK3C2A-203ENST00000531428 PHKG2P15735 406 aa20.17■□□□□ 0.82
PIK3C2A-203ENST00000531428 DZIP1LQ8IYY4 767 aaKnown RBP20.17■□□□□ 0.82
PIK3C2A-203ENST00000531428 CYP27B1O15528 508 aa20.16■□□□□ 0.82
PIK3C2A-203ENST00000531428 EZH2Q15910 746 aaKnown RBP20.16■□□□□ 0.82
PIK3C2A-203ENST00000531428 PANK1Q8TE04 598 aa20.16■□□□□ 0.82
PIK3C2A-203ENST00000531428 CAMKK2Q96RR4 588 aa20.16■□□□□ 0.82
PIK3C2A-203ENST00000531428 TRIM27P14373 513 aa20.15■□□□□ 0.82
PIK3C2A-203ENST00000531428 PRIM1P49642 420 aaKnown RBP20.15■□□□□ 0.82
PIK3C2A-203ENST00000531428 DCAF5Q96JK2 942 aa20.15■□□□□ 0.82
PIK3C2A-203ENST00000531428 FTSJ3Q8IY81 847 aaKnown RBP20.14■□□□□ 0.81
PIK3C2A-203ENST00000531428 PKD1L3Q7Z443 1732 aa20.14■□□□□ 0.81
PIK3C2A-203ENST00000531428 HOXB7P09629 217 aa20.13■□□□□ 0.81
PIK3C2A-203ENST00000531428 NHSQ6T4R5 1651 aa20.13■□□□□ 0.81
PIK3C2A-203ENST00000531428 RLBP1P12271 317 aa20.12■□□□□ 0.81
PIK3C2A-203ENST00000531428 KRT24Q2M2I5 525 aa20.12■□□□□ 0.81
PIK3C2A-203ENST00000531428 PTF1AQ7RTS3 328 aa20.12■□□□□ 0.81
PIK3C2A-203ENST00000531428 COG6Q9Y2V7 657 aa20.12■□□□□ 0.81
PIK3C2A-203ENST00000531428 SHANK3Q9BYB0 1731 aa20.12■□□□□ 0.81
PIK3C2A-203ENST00000531428 ADAMTS7Q9UKP4 1686 aa20.12■□□□□ 0.81
PIK3C2A-203ENST00000531428 BTBD11A6QL63 1104 aa20.12■□□□□ 0.81
PIK3C2A-203ENST00000531428 MVPQ14764 893 aaKnown RBP20.12■□□□□ 0.81
PIK3C2A-203ENST00000531428 NKX1-1Q15270 411 aaPredicted RBP20.12■□□□□ 0.81
PIK3C2A-203ENST00000531428 NBPF14Q5TI25 921 aa20.12■□□□□ 0.81
PIK3C2A-203ENST00000531428 API5Q9BZZ5 524 aaKnown RBP20.12■□□□□ 0.81
PIK3C2A-203ENST00000531428 EIF4A1P60842 406 aaKnown RBP20.1■□□□□ 0.81
PIK3C2A-203ENST00000531428 CCDC30Q5VVM6 783 aa20.1■□□□□ 0.81
PIK3C2A-203ENST00000531428 CLUAP1Q96AJ1 413 aa20.1■□□□□ 0.81
PIK3C2A-203ENST00000531428 SLC52A2Q9HAB3 445 aa20.09■□□□□ 0.81
PIK3C2A-203ENST00000531428 CHMP4BQ9H444 224 aaKnown RBP20.08■□□□□ 0.81
PIK3C2A-203ENST00000531428 DDX19BQ9UMR2 479 aa20.08■□□□□ 0.81
PIK3C2A-203ENST00000531428 TNNQ9UQP3 1299 aa20.08■□□□□ 0.81
PIK3C2A-203ENST00000531428 PTPRCP08575 1304 aa20.08■□□□□ 0.81
PIK3C2A-203ENST00000531428 KDM6AO15550 1401 aaPredicted RBP20.08■□□□□ 0.8
PIK3C2A-203ENST00000531428 TMOD3Q9NYL9 352 aa20.08■□□□□ 0.8
PIK3C2A-203ENST00000531428 DOT1LQ8TEK3 1739 aa20.07■□□□□ 0.8
PIK3C2A-203ENST00000531428 HMGB2P26583 209 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms