RNA–Protein interactions for RNA: ENST00000531006.1

TSTA3-213, Transcript of tissue specific transplantation antigen P35B, humanhuman

TSL 2

Gene TSTA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSTA3-213ENST00000531006 QSER1Q2KHR3 1735 aa27.58■■■□□ 2.01
TSTA3-213ENST00000531006 ATP6V1AP38606 617 aa27.58■■■□□ 2.01
TSTA3-213ENST00000531006 ITPK1Q13572 414 aa27.58■■■□□ 2.01
TSTA3-213ENST00000531006 U2AF1L5P0DN76 240 aaPredicted RBP27.57■■■□□ 2
TSTA3-213ENST00000531006 U2AF1Q01081 240 aaKnown RBP eCLIP27.57■■■□□ 2
TSTA3-213ENST00000531006 COL23A1Q86Y22 540 aaPredicted RBP27.57■■■□□ 2
TSTA3-213ENST00000531006 LINC00116Q8NCU8 138 aa27.57■■■□□ 2
TSTA3-213ENST00000531006 NUDCQ9Y266 331 aa27.57■■■□□ 2
TSTA3-213ENST00000531006 RNMTO43148 476 aaKnown RBP27.56■■■□□ 2
TSTA3-213ENST00000531006 ZEB1P37275 1124 aaPredicted RBP27.56■■■□□ 2
TSTA3-213ENST00000531006 PHACTR3Q96KR7 559 aa27.56■■■□□ 2
TSTA3-213ENST00000531006 SLC4A9Q96Q91 983 aa27.56■■■□□ 2
TSTA3-213ENST00000531006 PRKAR2BP31323 418 aa27.55■■■□□ 2
TSTA3-213ENST00000531006 AMIGO3Q86WK7 504 aa27.55■■■□□ 2
TSTA3-213ENST00000531006 C4BP0C0L5 1744 aa27.55■■■□□ 2
TSTA3-213ENST00000531006 AK7Q96M32 723 aa27.54■■■□□ 2
TSTA3-213ENST00000531006 RSPH6AQ9H0K4 717 aa27.54■■■□□ 2
TSTA3-213ENST00000531006 PTCD1O75127 700 aaKnown RBP27.53■■■□□ 2
TSTA3-213ENST00000531006 SGIP1Q9BQI5 828 aa27.53■■■□□ 2
TSTA3-213ENST00000531006 SLC52A2Q9HAB3 445 aa27.52■■■□□ 2
TSTA3-213ENST00000531006 PHF14O94880 888 aa27.51■■□□□ 1.99
TSTA3-213ENST00000531006 SLC16A10Q8TF71 515 aa27.5■■□□□ 1.99
TSTA3-213ENST00000531006 UBR3Q6ZT12 1888 aa27.49■■□□□ 1.99
TSTA3-213ENST00000531006 SLC39A6Q13433 755 aa27.49■■□□□ 1.99
TSTA3-213ENST00000531006 MSL1Q68DK7 614 aa27.48■■□□□ 1.99
TSTA3-213ENST00000531006 GAS2L2Q8NHY3 880 aa27.48■■□□□ 1.99
TSTA3-213ENST00000531006 GNAT3A8MTJ3 354 aa27.47■■□□□ 1.99
TSTA3-213ENST00000531006 IL17REQ8NFR9 667 aa27.47■■□□□ 1.99
TSTA3-213ENST00000531006 ARXQ96QS3 562 aa27.47■■□□□ 1.99
TSTA3-213ENST00000531006 GNPATO15228 680 aa27.46■■□□□ 1.99
TSTA3-213ENST00000531006 FCHSD2O94868 740 aa27.46■■□□□ 1.99
TSTA3-213ENST00000531006 HMGB2P26583 209 aaKnown RBP27.46■■□□□ 1.99
TSTA3-213ENST00000531006 RALBP1Q15311 655 aa27.46■■□□□ 1.99
TSTA3-213ENST00000531006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.45■■□□□ 1.98
TSTA3-213ENST00000531006 FHDC1Q9C0D6 1143 aaPredicted RBP27.45■■□□□ 1.98
TSTA3-213ENST00000531006 MAP3K5Q99683 1374 aa27.45■■□□□ 1.98
TSTA3-213ENST00000531006 MYH14Q7Z406 1995 aaKnown RBP27.44■■□□□ 1.98
TSTA3-213ENST00000531006 FLAD1Q8NFF5 587 aa27.43■■□□□ 1.98
TSTA3-213ENST00000531006 ADAMTS7Q9UKP4 1686 aa27.43■■□□□ 1.98
TSTA3-213ENST00000531006 POLD1P28340 1107 aa27.42■■□□□ 1.98
TSTA3-213ENST00000531006 KLHL34Q8N239 644 aa27.41■■□□□ 1.98
TSTA3-213ENST00000531006 COL24A1Q17RW2 1714 aa27.41■■□□□ 1.98
TSTA3-213ENST00000531006 SYT17Q9BSW7 474 aa27.4■■□□□ 1.98
TSTA3-213ENST00000531006 COL5A3P25940 1745 aaPredicted RBP27.4■■□□□ 1.98
TSTA3-213ENST00000531006 ZNF831Q5JPB2 1677 aa27.4■■□□□ 1.98
TSTA3-213ENST00000531006 MRC1P22897 1456 aa27.39■■□□□ 1.98
TSTA3-213ENST00000531006 SSFA2P28290 1259 aa27.39■■□□□ 1.98
TSTA3-213ENST00000531006 TEFQ10587 303 aa27.39■■□□□ 1.98
TSTA3-213ENST00000531006 DCTN1Q14203 1278 aa27.37■■□□□ 1.97
TSTA3-213ENST00000531006 RC3H1Q5TC82 1133 aaKnown RBP27.37■■□□□ 1.97
TSTA3-213ENST00000531006 MCM10Q7L590 875 aa27.37■■□□□ 1.97
TSTA3-213ENST00000531006 DNAJC10Q8IXB1 793 aa27.37■■□□□ 1.97
TSTA3-213ENST00000531006 RTCBQ9Y3I0 505 aaKnown RBP27.37■■□□□ 1.97
TSTA3-213ENST00000531006 TJP1Q07157 1748 aa27.36■■□□□ 1.97
TSTA3-213ENST00000531006 CRKLP46109 303 aaKnown RBP27.36■■□□□ 1.97
TSTA3-213ENST00000531006 TRAPPC3LQ5T215 181 aa27.35■■□□□ 1.97
TSTA3-213ENST00000531006 MYBBP1AQ9BQG0 1328 aaKnown RBP27.35■■□□□ 1.97
TSTA3-213ENST00000531006 SIPA1L3O60292 1781 aaPredicted RBP27.35■■□□□ 1.97
TSTA3-213ENST00000531006 RPS6KA4O75676 772 aa27.34■■□□□ 1.97
TSTA3-213ENST00000531006 ARHGEF1Q92888 912 aaKnown RBP27.34■■□□□ 1.97
TSTA3-213ENST00000531006 CNTNAP4Q9C0A0 1308 aa27.34■■□□□ 1.97
TSTA3-213ENST00000531006 DLG5Q8TDM6 1919 aa27.33■■□□□ 1.97
TSTA3-213ENST00000531006 RTF1Q92541 710 aaKnown RBP27.33■■□□□ 1.97
TSTA3-213ENST00000531006 PLEKHF1Q96S99 279 aa27.33■■□□□ 1.97
TSTA3-213ENST00000531006 KCPQ6ZWJ8 1503 aa27.32■■□□□ 1.96
TSTA3-213ENST00000531006 KCNQ3O43525 872 aa27.32■■□□□ 1.96
TSTA3-213ENST00000531006 INTS5Q6P9B9 1019 aaKnown RBP27.32■■□□□ 1.96
TSTA3-213ENST00000531006 TTC5Q8N0Z6 440 aa27.32■■□□□ 1.96
TSTA3-213ENST00000531006 CEMIPQ8WUJ3 1361 aa27.32■■□□□ 1.96
TSTA3-213ENST00000531006 NEFMP07197 916 aa27.3■■□□□ 1.96
TSTA3-213ENST00000531006 ZNF790Q6PG37 636 aa27.3■■□□□ 1.96
TSTA3-213ENST00000531006 ZNF496Q96IT1 587 aaPredicted RBP27.3■■□□□ 1.96
TSTA3-213ENST00000531006 PRKRIP1Q9H875 184 aaPredicted RBP27.3■■□□□ 1.96
TSTA3-213ENST00000531006 ZNF316A6NFI3 1004 aaPredicted RBP27.29■■□□□ 1.96
TSTA3-213ENST00000531006 BTBD11A6QL63 1104 aa27.29■■□□□ 1.96
TSTA3-213ENST00000531006 CYP19A1P11511 503 aaPredicted RBP27.29■■□□□ 1.96
TSTA3-213ENST00000531006 UBR2Q8IWV8 1755 aa27.29■■□□□ 1.96
TSTA3-213ENST00000531006 RFC4P35249 363 aa27.28■■□□□ 1.96
TSTA3-213ENST00000531006 NLGN2Q8NFZ4 835 aa27.27■■□□□ 1.96
TSTA3-213ENST00000531006 CCDC87Q9NVE4 849 aa27.27■■□□□ 1.96
TSTA3-213ENST00000531006 DCAF8L1A6NGE4 600 aa27.26■■□□□ 1.95
TSTA3-213ENST00000531006 SRP68Q9UHB9 627 aaKnown RBP27.26■■□□□ 1.95
TSTA3-213ENST00000531006 NFE2L2Q16236 605 aa27.25■■□□□ 1.95
TSTA3-213ENST00000531006 VSIG10Q8N0Z9 540 aa27.25■■□□□ 1.95
TSTA3-213ENST00000531006 MIS18AQ9NYP9 233 aa27.25■■□□□ 1.95
TSTA3-213ENST00000531006 CICQ96RK0 1608 aaPredicted RBP27.24■■□□□ 1.95
TSTA3-213ENST00000531006 MAPK8IP3Q9UPT6 1336 aa27.24■■□□□ 1.95
TSTA3-213ENST00000531006 HTATSF1O43719 755 aaKnown RBP27.24■■□□□ 1.95
TSTA3-213ENST00000531006 ADRA2BP18089 450 aa27.24■■□□□ 1.95
TSTA3-213ENST00000531006 PNNQ9H307 717 aaKnown RBP27.24■■□□□ 1.95
TSTA3-213ENST00000531006 C4AP0C0L4 1744 aa27.24■■□□□ 1.95
TSTA3-213ENST00000531006 CCDC146Q8IYE0 955 aa27.23■■□□□ 1.95
TSTA3-213ENST00000531006 THUMPD2Q9BTF0 503 aaKnown RBP27.23■■□□□ 1.95
TSTA3-213ENST00000531006 ZBTB1Q9Y2K1 713 aa27.23■■□□□ 1.95
TSTA3-213ENST00000531006 MMP10P09238 476 aa27.22■■□□□ 1.95
TSTA3-213ENST00000531006 GYS1P13807 737 aa27.22■■□□□ 1.95
TSTA3-213ENST00000531006 CANXP27824 592 aaKnown RBP27.22■■□□□ 1.95
TSTA3-213ENST00000531006 HEG1Q9ULI3 1381 aa27.22■■□□□ 1.95
TSTA3-213ENST00000531006 FMNL2Q96PY5 1086 aa27.21■■□□□ 1.95
TSTA3-213ENST00000531006 TAF7Q15545 349 aaPredicted RBP27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms