RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 BTBD11A6QL63 1104 aa18.03■□□□□ 0.48
NXF1-207ENST00000530875 NFATC2IPQ8NCF5 419 aa18.03■□□□□ 0.48
NXF1-207ENST00000530875 CABP4P57796 275 aa18.02■□□□□ 0.48
NXF1-207ENST00000530875 C8orf58Q8NAV2 365 aa18.02■□□□□ 0.48
NXF1-207ENST00000530875 MRC1P22897 1456 aa18.02■□□□□ 0.47
NXF1-207ENST00000530875 ELL2O00472 640 aaPredicted RBP18.02■□□□□ 0.47
NXF1-207ENST00000530875 KRT24Q2M2I5 525 aa18.02■□□□□ 0.47
NXF1-207ENST00000530875 TSPYL6Q8N831 410 aa18.02■□□□□ 0.47
NXF1-207ENST00000530875 ZNF772Q68DY9 489 aaPredicted RBP18.01■□□□□ 0.47
NXF1-207ENST00000530875 MARCH10Q8NA82 808 aaPredicted RBP18.01■□□□□ 0.47
NXF1-207ENST00000530875 SIPA1L3O60292 1781 aaPredicted RBP18■□□□□ 0.47
NXF1-207ENST00000530875 ERVV-2B6SEH9 535 aa18■□□□□ 0.47
NXF1-207ENST00000530875 THSD7AQ9UPZ6 1657 aa18■□□□□ 0.47
NXF1-207ENST00000530875 KCNQ3O43525 872 aa18■□□□□ 0.47
NXF1-207ENST00000530875 CT47B1P0C2W7 299 aaPredicted RBP18■□□□□ 0.47
NXF1-207ENST00000530875 TWISTNBQ3B726 338 aaPredicted RBP18■□□□□ 0.47
NXF1-207ENST00000530875 TOGARAM1Q9Y4F4 1720 aa17.99■□□□□ 0.47
NXF1-207ENST00000530875 ONECUT3O60422 494 aaPredicted RBP17.98■□□□□ 0.47
NXF1-207ENST00000530875 VAMP4O75379 141 aa17.98■□□□□ 0.47
NXF1-207ENST00000530875 RARSP54136 660 aaKnown RBP17.98■□□□□ 0.47
NXF1-207ENST00000530875 KDM3BQ7LBC6 1761 aa17.98■□□□□ 0.47
NXF1-207ENST00000530875 BCAR3O75815 825 aa17.97■□□□□ 0.47
NXF1-207ENST00000530875 SLC39A6Q13433 755 aa17.97■□□□□ 0.47
NXF1-207ENST00000530875 EIF4A1P60842 406 aaKnown RBP17.96■□□□□ 0.47
NXF1-207ENST00000530875 SEPT12Q8IYM1 358 aa17.96■□□□□ 0.47
NXF1-207ENST00000530875 BCL2L13Q9BXK5 485 aa17.96■□□□□ 0.47
NXF1-207ENST00000530875 ZNF790Q6PG37 636 aa17.96■□□□□ 0.47
NXF1-207ENST00000530875 TMOD3Q9NYL9 352 aa17.96■□□□□ 0.47
NXF1-207ENST00000530875 RNF123Q5XPI4 1314 aa17.95■□□□□ 0.46
NXF1-207ENST00000530875 RRP1P56182 461 aaKnown RBP17.94■□□□□ 0.46
NXF1-207ENST00000530875 IRX6P78412 446 aaPredicted RBP17.94■□□□□ 0.46
NXF1-207ENST00000530875 SSH1Q8WYL5 1049 aa17.94■□□□□ 0.46
NXF1-207ENST00000530875 RBM6P78332 1123 aaKnown RBP17.94■□□□□ 0.46
NXF1-207ENST00000530875 PIGBQ92521 554 aa17.94■□□□□ 0.46
NXF1-207ENST00000530875 SYTL4Q96C24 671 aaPredicted RBP17.94■□□□□ 0.46
NXF1-207ENST00000530875 TCERG1O14776 1098 aaKnown RBP17.93■□□□□ 0.46
NXF1-207ENST00000530875 PRIM1P49642 420 aaKnown RBP17.93■□□□□ 0.46
NXF1-207ENST00000530875 TTC5Q8N0Z6 440 aa17.93■□□□□ 0.46
NXF1-207ENST00000530875 ACSBG1Q96GR2 724 aa17.93■□□□□ 0.46
NXF1-207ENST00000530875 SMC4Q9NTJ3 1288 aa17.93■□□□□ 0.46
NXF1-207ENST00000530875 RGS17Q9UGC6 210 aaPredicted RBP17.93■□□□□ 0.46
NXF1-207ENST00000530875 PLIN1O60240 522 aa17.92■□□□□ 0.46
NXF1-207ENST00000530875 ZNF428Q96B54 188 aa17.92■□□□□ 0.46
NXF1-207ENST00000530875 DOT1LQ8TEK3 1739 aa17.92■□□□□ 0.46
NXF1-207ENST00000530875 ALDH1L2Q3SY69 923 aa17.92■□□□□ 0.46
NXF1-207ENST00000530875 FAM182BQ5T319 152 aa17.91■□□□□ 0.46
NXF1-207ENST00000530875 ZNF496Q96IT1 587 aaPredicted RBP17.91■□□□□ 0.46
NXF1-207ENST00000530875 BCL9O00512 1426 aa17.91■□□□□ 0.46
NXF1-207ENST00000530875 HEG1Q9ULI3 1381 aa17.9■□□□□ 0.46
NXF1-207ENST00000530875 ITGB4P16144 1822 aa17.9■□□□□ 0.46
NXF1-207ENST00000530875 SOS1Q07889 1333 aaPredicted RBP17.9■□□□□ 0.46
NXF1-207ENST00000530875 GIGYF1O75420 1035 aaPredicted RBP17.89■□□□□ 0.45
NXF1-207ENST00000530875 RXRBP28702 533 aa17.89■□□□□ 0.45
NXF1-207ENST00000530875 NECTIN2Q92692 538 aa17.89■□□□□ 0.45
NXF1-207ENST00000530875 FRAT1Q92837 279 aaPredicted RBP17.89■□□□□ 0.45
NXF1-207ENST00000530875 ASAP1Q9ULH1 1129 aa17.89■□□□□ 0.45
NXF1-207ENST00000530875 PAPPAQ13219 1627 aa17.89■□□□□ 0.45
NXF1-207ENST00000530875 PRAMEF22A3QJZ6 481 aa17.88■□□□□ 0.45
NXF1-207ENST00000530875 ILDR1Q86SU0 546 aaPredicted RBP17.88■□□□□ 0.45
NXF1-207ENST00000530875 MRPL50Q8N5N7 158 aaKnown RBP17.88■□□□□ 0.45
NXF1-207ENST00000530875 FMNL2Q96PY5 1086 aa17.88■□□□□ 0.45
NXF1-207ENST00000530875 KCNQ2O43526 872 aa17.88■□□□□ 0.45
NXF1-207ENST00000530875 HOXB7P09629 217 aa17.88■□□□□ 0.45
NXF1-207ENST00000530875 POTEAQ6S8J7 498 aa17.88■□□□□ 0.45
NXF1-207ENST00000530875 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.88■□□□□ 0.45
NXF1-207ENST00000530875 ATG3Q9NT62 314 aa17.88■□□□□ 0.45
NXF1-207ENST00000530875 PTCD1O75127 700 aaKnown RBP17.87■□□□□ 0.45
NXF1-207ENST00000530875 EIF2S2P20042 333 aaKnown RBP17.87■□□□□ 0.45
NXF1-207ENST00000530875 CANXP27824 592 aaKnown RBP17.87■□□□□ 0.45
NXF1-207ENST00000530875 HDGFL1Q5TGJ6 251 aa17.87■□□□□ 0.45
NXF1-207ENST00000530875 KCPQ6ZWJ8 1503 aa17.86■□□□□ 0.45
NXF1-207ENST00000530875 CCDC30Q5VVM6 783 aa17.86■□□□□ 0.45
NXF1-207ENST00000530875 ERICH6BQ5W0A0 696 aa17.86■□□□□ 0.45
NXF1-207ENST00000530875 KRT27Q7Z3Y8 459 aa17.86■□□□□ 0.45
NXF1-207ENST00000530875 NOB1Q9ULX3 412 aaKnown RBP17.86■□□□□ 0.45
NXF1-207ENST00000530875 UBR2Q8IWV8 1755 aa17.85■□□□□ 0.45
NXF1-207ENST00000530875 SNRPA1P09661 255 aaKnown RBP17.85■□□□□ 0.45
NXF1-207ENST00000530875 BRPF1P55201 1214 aaPredicted RBP17.85■□□□□ 0.45
NXF1-207ENST00000530875 KIF16BQ96L93 1317 aa17.85■□□□□ 0.45
NXF1-207ENST00000530875 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
NXF1-207ENST00000530875 C20orf194Q5TEA3 1177 aa17.84■□□□□ 0.45
NXF1-207ENST00000530875 STK31Q9BXU1 1019 aa17.84■□□□□ 0.45
NXF1-207ENST00000530875 KAT6BQ8WYB5 2073 aa17.84■□□□□ 0.45
NXF1-207ENST00000530875 PTF1AQ7RTS3 328 aa17.84■□□□□ 0.45
NXF1-207ENST00000530875 TSHZ2Q9NRE2 1034 aa17.84■□□□□ 0.45
NXF1-207ENST00000530875 BRWD3Q6RI45 1802 aa17.83■□□□□ 0.45
NXF1-207ENST00000530875 C5P01031 1676 aa17.83■□□□□ 0.45
NXF1-207ENST00000530875 ZKSCAN2Q63HK3 967 aa17.83■□□□□ 0.44
NXF1-207ENST00000530875 TNNQ9UQP3 1299 aa17.83■□□□□ 0.44
NXF1-207ENST00000530875 RBM42Q9BTD8 480 aaKnown RBP17.82■□□□□ 0.44
NXF1-207ENST00000530875 USP16Q9Y5T5 823 aa17.82■□□□□ 0.44
NXF1-207ENST00000530875 RGS12O14924 1447 aa17.82■□□□□ 0.44
NXF1-207ENST00000530875 CHMP4AQ9BY43 222 aa17.82■□□□□ 0.44
NXF1-207ENST00000530875 CHPF2Q9P2E5 772 aa17.82■□□□□ 0.44
NXF1-207ENST00000530875 IPO8O15397 1037 aaKnown RBP17.8■□□□□ 0.44
NXF1-207ENST00000530875 TRIM27P14373 513 aa17.8■□□□□ 0.44
NXF1-207ENST00000530875 ATF7IPQ6VMQ6 1270 aa17.8■□□□□ 0.44
NXF1-207ENST00000530875 G2E3Q7L622 706 aa17.8■□□□□ 0.44
NXF1-207ENST00000530875 CLUAP1Q96AJ1 413 aa17.8■□□□□ 0.44
NXF1-207ENST00000530875 NHSQ6T4R5 1651 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms