RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 MAPKBP1O60336 1514 aa12.28□□□□□ -0.44
CHKA-205ENST00000530730 TRAK2O60296 914 aa12.28□□□□□ -0.44
CHKA-205ENST00000530730 CYP2U1Q7Z449 544 aa12.28□□□□□ -0.44
CHKA-205ENST00000530730 TBC1D2BQ9UPU7 963 aa12.28□□□□□ -0.44
CHKA-205ENST00000530730 ADCY10Q96PN6 1610 aa12.28□□□□□ -0.44
CHKA-205ENST00000530730 CUL7Q14999 1698 aa12.27□□□□□ -0.45
CHKA-205ENST00000530730 GPR161Q8N6U8 529 aaKnown RBP12.27□□□□□ -0.45
CHKA-205ENST00000530730 CEP126Q9P2H0 1117 aa12.27□□□□□ -0.45
CHKA-205ENST00000530730 PCDHB11Q9Y5F2 797 aa12.27□□□□□ -0.45
CHKA-205ENST00000530730 A0A1W2PRU2 124 aa12.25□□□□□ -0.45
CHKA-205ENST00000530730 SCTRP47872 440 aa12.25□□□□□ -0.45
CHKA-205ENST00000530730 KRT76Q01546 638 aa12.25□□□□□ -0.45
CHKA-205ENST00000530730 CLN3Q13286 438 aa12.25□□□□□ -0.45
CHKA-205ENST00000530730 OSBPL3Q9H4L5 887 aa12.25□□□□□ -0.45
CHKA-205ENST00000530730 TNIKQ9UKE5 1360 aa12.25□□□□□ -0.45
CHKA-205ENST00000530730 EIF4G2P78344 907 aaKnown RBP eCLIP12.24□□□□□ -0.45
CHKA-205ENST00000530730 IRF5Q13568 498 aa12.24□□□□□ -0.45
CHKA-205ENST00000530730 CARMIL2Q6F5E8 1435 aa12.24□□□□□ -0.45
CHKA-205ENST00000530730 DIP2BQ9P265 1576 aa12.23□□□□□ -0.45
CHKA-205ENST00000530730 SV2AQ7L0J3 742 aa12.23□□□□□ -0.45
CHKA-205ENST00000530730 COL25A1Q9BXS0 654 aaPredicted RBP12.22□□□□□ -0.45
CHKA-205ENST00000530730 GMCL1Q96IK5 515 aa12.21□□□□□ -0.45
CHKA-205ENST00000530730 MEN1O00255 615 aa12.2□□□□□ -0.46
CHKA-205ENST00000530730 GNRH1P01148 92 aa12.2□□□□□ -0.46
CHKA-205ENST00000530730 WDR44Q5JSH3 913 aa12.2□□□□□ -0.46
CHKA-205ENST00000530730 PRICKLE2Q7Z3G6 844 aa12.2□□□□□ -0.46
CHKA-205ENST00000530730 VWA5B2Q8N398 1253 aa12.2□□□□□ -0.46
CHKA-205ENST00000530730 PHTF2Q8N3S3 785 aa12.2□□□□□ -0.46
CHKA-205ENST00000530730 NLRP3Q96P20 1036 aa12.2□□□□□ -0.46
CHKA-205ENST00000530730 CCDC85AQ96PX6 553 aaPredicted RBP12.2□□□□□ -0.46
CHKA-205ENST00000530730 GRIP2Q9C0E4 1043 aa12.2□□□□□ -0.46
CHKA-205ENST00000530730 CNTNAP3BQ96NU0 1288 aa12.19□□□□□ -0.46
CHKA-205ENST00000530730 CNTNAP3Q9BZ76 1288 aa12.19□□□□□ -0.46
CHKA-205ENST00000530730 ESF1Q9H501 851 aaKnown RBP12.19□□□□□ -0.46
CHKA-205ENST00000530730 CHIC2Q9UKJ5 165 aa12.19□□□□□ -0.46
CHKA-205ENST00000530730 ABCC2Q92887 1545 aa12.19□□□□□ -0.46
CHKA-205ENST00000530730 SPATA31C2B4DYI2 1134 aa12.18□□□□□ -0.46
CHKA-205ENST00000530730 MYCP01106 439 aaPredicted RBP12.18□□□□□ -0.46
CHKA-205ENST00000530730 MCM6Q14566 821 aa12.18□□□□□ -0.46
CHKA-205ENST00000530730 WASHC4Q2M389 1173 aa12.18□□□□□ -0.46
CHKA-205ENST00000530730 UACAQ9BZF9 1416 aa12.18□□□□□ -0.46
CHKA-205ENST00000530730 DISP1Q96F81 1524 aa12.17□□□□□ -0.46
CHKA-205ENST00000530730 RAPGEF2Q9Y4G8 1499 aa12.17□□□□□ -0.46
CHKA-205ENST00000530730 CDC14CA4D256 554 aa12.17□□□□□ -0.46
CHKA-205ENST00000530730 PRKCSHP14314 528 aaPredicted RBP12.17□□□□□ -0.46
CHKA-205ENST00000530730 RNFT1Q5M7Z0 435 aa12.17□□□□□ -0.46
CHKA-205ENST00000530730 ARHGEF10LQ9HCE6 1279 aa12.17□□□□□ -0.46
CHKA-205ENST00000530730 DYRK1BQ9Y463 629 aa12.17□□□□□ -0.46
CHKA-205ENST00000530730 ASXL2Q76L83 1435 aa12.17□□□□□ -0.46
CHKA-205ENST00000530730 IQGAP2Q13576 1575 aa12.17□□□□□ -0.46
CHKA-205ENST00000530730 UHRF1BP1LA0JNW5 1464 aa12.16□□□□□ -0.46
CHKA-205ENST00000530730 SLURP2P0DP57 97 aa12.16□□□□□ -0.46
CHKA-205ENST00000530730 PLB1Q6P1J6 1458 aa12.15□□□□□ -0.46
CHKA-205ENST00000530730 SLC27A3Q5K4L6 730 aa12.15□□□□□ -0.46
CHKA-205ENST00000530730 ESYT1Q9BSJ8 1104 aa12.15□□□□□ -0.46
CHKA-205ENST00000530730 GDPD2Q9HCC8 539 aa12.15□□□□□ -0.46
CHKA-205ENST00000530730 KDM6BO15054 1643 aa12.15□□□□□ -0.47
CHKA-205ENST00000530730 RHOQP17081 205 aa12.14□□□□□ -0.47
CHKA-205ENST00000530730 TRIM22Q8IYM9 498 aa12.14□□□□□ -0.47
CHKA-205ENST00000530730 CDCA7Q9BWT1 371 aaPredicted RBP12.14□□□□□ -0.47
CHKA-205ENST00000530730 CUEDC1Q9NWM3 386 aaPredicted RBP12.14□□□□□ -0.47
CHKA-205ENST00000530730 HRH3Q9Y5N1 445 aa12.14□□□□□ -0.47
CHKA-205ENST00000530730 SOX11P35716 441 aa12.13□□□□□ -0.47
CHKA-205ENST00000530730 USP4Q13107 963 aa12.13□□□□□ -0.47
CHKA-205ENST00000530730 SLFNL1Q499Z3 407 aa12.13□□□□□ -0.47
CHKA-205ENST00000530730 NBPF10Q6P3W6 841 aaKnown RBP12.13□□□□□ -0.47
CHKA-205ENST00000530730 NBPF15Q8N660 670 aa12.13□□□□□ -0.47
CHKA-205ENST00000530730 TSPOAP1O95153 1857 aa12.12□□□□□ -0.47
CHKA-205ENST00000530730 UGGT2Q9NYU1 1516 aa12.12□□□□□ -0.47
CHKA-205ENST00000530730 VAC14Q08AM6 782 aa12.12□□□□□ -0.47
CHKA-205ENST00000530730 CNKSR1Q969H4 720 aa12.12□□□□□ -0.47
CHKA-205ENST00000530730 DOLKQ9UPQ8 538 aa12.12□□□□□ -0.47
CHKA-205ENST00000530730 GLI2P10070 1586 aa12.11□□□□□ -0.47
CHKA-205ENST00000530730 IL2RAP01589 272 aa12.11□□□□□ -0.47
CHKA-205ENST00000530730 POU4F2Q12837 409 aa12.11□□□□□ -0.47
CHKA-205ENST00000530730 RNF135Q8IUD6 432 aa12.11□□□□□ -0.47
CHKA-205ENST00000530730 SIRT1Q96EB6 747 aa12.11□□□□□ -0.47
CHKA-205ENST00000530730 ZNF837Q96EG3 531 aaPredicted RBP12.11□□□□□ -0.47
CHKA-205ENST00000530730 XAGE2Q96GT9 111 aa12.11□□□□□ -0.47
CHKA-205ENST00000530730 KDM5BQ9UGL1 1544 aa12.11□□□□□ -0.47
CHKA-205ENST00000530730 H7C1W4 665 aa12.1□□□□□ -0.47
CHKA-205ENST00000530730 ABL2P42684 1182 aa12.1□□□□□ -0.47
CHKA-205ENST00000530730 TAS1R3Q7RTX0 852 aa12.1□□□□□ -0.47
CHKA-205ENST00000530730 WASLO00401 505 aaPredicted RBP12.09□□□□□ -0.47
CHKA-205ENST00000530730 MAP7D1Q3KQU3 841 aa12.09□□□□□ -0.47
CHKA-205ENST00000530730 ESCO1Q5FWF5 840 aa12.09□□□□□ -0.47
CHKA-205ENST00000530730 EPRSP07814 1512 aaKnown RBP12.09□□□□□ -0.47
CHKA-205ENST00000530730 CENPCQ03188 943 aa12.08□□□□□ -0.48
CHKA-205ENST00000530730 SRSF11Q05519 484 aaKnown RBP12.08□□□□□ -0.48
CHKA-205ENST00000530730 GAS6Q14393 721 aa12.08□□□□□ -0.48
CHKA-205ENST00000530730 ZNF385CQ66K41 422 aaPredicted RBP12.08□□□□□ -0.48
CHKA-205ENST00000530730 FHDC1Q9C0D6 1143 aaPredicted RBP12.08□□□□□ -0.48
CHKA-205ENST00000530730 RAB6BQ9NRW1 208 aa12.08□□□□□ -0.48
CHKA-205ENST00000530730 COL17A1Q9UMD9 1497 aaPredicted RBP12.08□□□□□ -0.48
CHKA-205ENST00000530730 DBN1Q16643 649 aa12.07□□□□□ -0.48
CHKA-205ENST00000530730 TSGA10IPQ3SY00 556 aa12.07□□□□□ -0.48
CHKA-205ENST00000530730 FOXR1Q6PIV2 292 aa12.06□□□□□ -0.48
CHKA-205ENST00000530730 TIMMDC1Q9NPL8 285 aa12.06□□□□□ -0.48
CHKA-205ENST00000530730 COG6Q9Y2V7 657 aa12.06□□□□□ -0.48
CHKA-205ENST00000530730 KIAA0556O60303 1618 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms