RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 MINDY4BA8MYZ0 360 aa9.54□□□□□ -0.88
CTNND1-220ENST00000529526 TSPYL1Q9H0U9 437 aa9.54□□□□□ -0.88
CTNND1-220ENST00000529526 CENPHQ9H3R5 247 aa9.54□□□□□ -0.88
CTNND1-220ENST00000529526 SF3B2Q13435 895 aaKnown RBP9.54□□□□□ -0.88
CTNND1-220ENST00000529526 LEKR1Q6ZMV7 388 aa9.54□□□□□ -0.88
CTNND1-220ENST00000529526 STARD3NLO95772 234 aa9.54□□□□□ -0.88
CTNND1-220ENST00000529526 NKTRP30414 1462 aaKnown RBP9.54□□□□□ -0.88
CTNND1-220ENST00000529526 MATR3P43243 847 aaKnown RBP eCLIP9.54□□□□□ -0.886e-7■■■■□ 22.1
CTNND1-220ENST00000529526 TAF7Q15545 349 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-220ENST00000529526 DHX37Q8IY37 1157 aaKnown RBP9.54□□□□□ -0.88
CTNND1-220ENST00000529526 LRRFIP2Q9Y608 721 aaKnown RBP9.54□□□□□ -0.88
CTNND1-220ENST00000529526 NEFHP12036 1026 aa9.53□□□□□ -0.88
CTNND1-220ENST00000529526 TMOD3Q9NYL9 352 aa9.53□□□□□ -0.88
CTNND1-220ENST00000529526 CCDC141Q6ZP82 1450 aa9.53□□□□□ -0.88
CTNND1-220ENST00000529526 RAB11FIP3O75154 756 aa9.53□□□□□ -0.88
CTNND1-220ENST00000529526 MAP3K11Q16584 847 aa9.53□□□□□ -0.88
CTNND1-220ENST00000529526 CIZ1Q9ULV3 898 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-220ENST00000529526 ERLIN2O94905 339 aa9.53□□□□□ -0.88
CTNND1-220ENST00000529526 PRKCSHP14314 528 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-220ENST00000529526 KCNH5Q8NCM2 988 aa9.53□□□□□ -0.88
CTNND1-220ENST00000529526 IFIT1P09914 478 aaKnown RBP9.53□□□□□ -0.88
CTNND1-220ENST00000529526 WASF1Q92558 559 aa9.53□□□□□ -0.88
CTNND1-220ENST00000529526 CCDC82Q8N4S0 544 aa9.52□□□□□ -0.88
CTNND1-220ENST00000529526 ADGRF5Q8IZF2 1346 aa9.52□□□□□ -0.89
CTNND1-220ENST00000529526 GOLGA6L10A6NI86 522 aa9.52□□□□□ -0.89
CTNND1-220ENST00000529526 GLRX3O76003 335 aaKnown RBP9.52□□□□□ -0.89
CTNND1-220ENST00000529526 DHX8Q14562 1220 aaKnown RBP9.52□□□□□ -0.89
CTNND1-220ENST00000529526 CFAP100Q494V2 611 aa9.52□□□□□ -0.89
CTNND1-220ENST00000529526 ANKRD62A6NC57 917 aa9.52□□□□□ -0.89
CTNND1-220ENST00000529526 IBSPP21815 317 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-220ENST00000529526 EIF5P55010 431 aaKnown RBP9.52□□□□□ -0.89
CTNND1-220ENST00000529526 ALDH1L2Q3SY69 923 aa9.52□□□□□ -0.89
CTNND1-220ENST00000529526 LARP1Q6PKG0 1096 aaKnown RBP9.52□□□□□ -0.89
CTNND1-220ENST00000529526 LUC7LQ9NQ29 371 aaKnown RBP9.52□□□□□ -0.89
CTNND1-220ENST00000529526 BMP2KQ9NSY1 1161 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-220ENST00000529526 DNMBPQ6XZF7 1577 aa9.52□□□□□ -0.89
CTNND1-220ENST00000529526 FAM135AQ9P2D6 1515 aa9.52□□□□□ -0.89
CTNND1-220ENST00000529526 MAGI1Q96QZ7 1491 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-220ENST00000529526 SMTNL1A8MU46 457 aa9.52□□□□□ -0.89
CTNND1-220ENST00000529526 KIAA1328Q86T90 577 aa9.51□□□□□ -0.89
CTNND1-220ENST00000529526 CCDC191Q8NCU4 936 aa9.51□□□□□ -0.89
CTNND1-220ENST00000529526 AKAP2Q9Y2D5 859 aa9.51□□□□□ -0.89
CTNND1-220ENST00000529526 U3KPZ7 1027 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-220ENST00000529526 POLR3DP05423 398 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-220ENST00000529526 SSFA2P28290 1259 aa9.51□□□□□ -0.89
CTNND1-220ENST00000529526 FBXO31Q5XUX0 539 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-220ENST00000529526 KLHL10Q6JEL2 608 aa9.51□□□□□ -0.89
CTNND1-220ENST00000529526 IQGAP2Q13576 1575 aa9.51□□□□□ -0.89
CTNND1-220ENST00000529526 ABCC5O15440 1437 aa9.51□□□□□ -0.89
CTNND1-220ENST00000529526 POGZQ7Z3K3 1410 aa9.51□□□□□ -0.89
CTNND1-220ENST00000529526 TSHZ3Q63HK5 1081 aa9.51□□□□□ -0.89
CTNND1-220ENST00000529526 CEP131Q9UPN4 1083 aa9.51□□□□□ -0.89
CTNND1-220ENST00000529526 ENOX2Q16206 610 aaKnown RBP9.5□□□□□ -0.89
CTNND1-220ENST00000529526 TAX1BP1Q86VP1 789 aa9.5□□□□□ -0.89
CTNND1-220ENST00000529526 ANKIB1Q9P2G1 1089 aa9.5□□□□□ -0.89
CTNND1-220ENST00000529526 KIF14Q15058 1648 aa9.5□□□□□ -0.89
CTNND1-220ENST00000529526 EPB41L2O43491 1005 aaKnown RBP9.5□□□□□ -0.89
CTNND1-220ENST00000529526 SEPT7Q16181 437 aaKnown RBP9.5□□□□□ -0.89
CTNND1-220ENST00000529526 CAVIN4Q5BKX8 364 aa9.5□□□□□ -0.89
CTNND1-220ENST00000529526 PLB1Q6P1J6 1458 aa9.5□□□□□ -0.89
CTNND1-220ENST00000529526 CCDC66A2RUB6 948 aa9.5□□□□□ -0.89
CTNND1-220ENST00000529526 TRIM27P14373 513 aa9.5□□□□□ -0.89
CTNND1-220ENST00000529526 CCT2P78371 535 aaKnown RBP9.5□□□□□ -0.89
CTNND1-220ENST00000529526 DNAAF4Q8WXU2 420 aa9.5□□□□□ -0.89
CTNND1-220ENST00000529526 NAPBQ9H115 298 aa9.5□□□□□ -0.89
CTNND1-220ENST00000529526 FAM83GA6ND36 823 aa9.5□□□□□ -0.89
CTNND1-220ENST00000529526 TMX1Q9H3N1 280 aa9.5□□□□□ -0.89
CTNND1-220ENST00000529526 MKNK2Q9HBH9 465 aa9.5□□□□□ -0.89
CTNND1-220ENST00000529526 SEC63Q9UGP8 760 aaKnown RBP9.5□□□□□ -0.89
CTNND1-220ENST00000529526 ESPNB1AK53 854 aa9.49□□□□□ -0.89
CTNND1-220ENST00000529526 RANBP6O60518 1105 aaKnown RBP9.49□□□□□ -0.89
CTNND1-220ENST00000529526 PPFIA3O75145 1194 aa9.49□□□□□ -0.89
CTNND1-220ENST00000529526 ZPR1O75312 459 aa9.49□□□□□ -0.89
CTNND1-220ENST00000529526 SSR1P43307 286 aaKnown RBP9.49□□□□□ -0.89
CTNND1-220ENST00000529526 PLCD4Q9BRC7 762 aa9.49□□□□□ -0.89
CTNND1-220ENST00000529526 ADAMTS2O95450 1211 aa9.49□□□□□ -0.89
CTNND1-220ENST00000529526 GPTP24298 496 aa9.49□□□□□ -0.89
CTNND1-220ENST00000529526 IFIT5Q13325 482 aaKnown RBP9.49□□□□□ -0.89
CTNND1-220ENST00000529526 JARID2Q92833 1246 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-220ENST00000529526 TRMT112Q9UI30 125 aaKnown RBP9.49□□□□□ -0.89
CTNND1-220ENST00000529526 MAP3K2Q9Y2U5 619 aa9.49□□□□□ -0.89
CTNND1-220ENST00000529526 ERLIN1O75477 346 aa9.49□□□□□ -0.89
CTNND1-220ENST00000529526 SLC4A8Q2Y0W8 1093 aa9.49□□□□□ -0.89
CTNND1-220ENST00000529526 CCDC144CPQ8IYA2 1237 aa9.49□□□□□ -0.89
CTNND1-220ENST00000529526 FOXO3O43524 673 aa9.49□□□□□ -0.89
CTNND1-220ENST00000529526 TXLNBQ8N3L3 684 aa9.49□□□□□ -0.89
CTNND1-220ENST00000529526 DZIP1Q86YF9 867 aaKnown RBP9.48□□□□□ -0.89
CTNND1-220ENST00000529526 CKAP2LQ8IYA6 745 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 CRACR2BQ8N4Y2 399 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-220ENST00000529526 CCDC102AQ96A19 550 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 C8orf76Q96K31 380 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 ZBTB3Q9H5J0 574 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 GDPD2Q9HCC8 539 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 CCDC183Q5T5S1 534 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 ZNF652Q9Y2D9 606 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 AMOTL2Q9Y2J4 779 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 KIAA0586Q9BVV6 1533 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 WASLO00401 505 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-220ENST00000529526 FBLN1P23142 703 aa9.48□□□□□ -0.89
CTNND1-220ENST00000529526 ARHGAP29Q52LW3 1261 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 274 ms