RNA–Protein interactions for RNA: ENST00000529216.1

PABPC4-223, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 317 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-223ENST00000529216 SPINK5Q9NQ38 1064 aaPredicted RBP10.67□□□□□ -0.7
PABPC4-223ENST00000529216 FANCIQ9NVI1 1328 aa10.66□□□□□ -0.7
PABPC4-223ENST00000529216 CABP4P57796 275 aa10.66□□□□□ -0.7
PABPC4-223ENST00000529216 DUSP27Q5VZP5 1158 aa10.66□□□□□ -0.7
PABPC4-223ENST00000529216 TOGARAM1Q9Y4F4 1720 aa10.66□□□□□ -0.7
PABPC4-223ENST00000529216 KRT27Q7Z3Y8 459 aa10.65□□□□□ -0.7
PABPC4-223ENST00000529216 MBIPQ9NS73 344 aa10.65□□□□□ -0.7
PABPC4-223ENST00000529216 TMOD3Q9NYL9 352 aa10.65□□□□□ -0.7
PABPC4-223ENST00000529216 TSPYL4Q9UJ04 414 aa10.65□□□□□ -0.7
PABPC4-223ENST00000529216 SCN11AQ9UI33 1791 aa10.65□□□□□ -0.71
PABPC4-223ENST00000529216 BTBD11A6QL63 1104 aa10.64□□□□□ -0.71
PABPC4-223ENST00000529216 CENPBP07199 599 aaPredicted RBP10.64□□□□□ -0.71
PABPC4-223ENST00000529216 NFATC2IPQ8NCF5 419 aa10.64□□□□□ -0.71
PABPC4-223ENST00000529216 TSR2Q969E8 191 aaKnown RBP10.64□□□□□ -0.71
PABPC4-223ENST00000529216 LAS1LQ9Y4W2 734 aaKnown RBP10.64□□□□□ -0.71
PABPC4-223ENST00000529216 PAPPAQ13219 1627 aa10.63□□□□□ -0.71
PABPC4-223ENST00000529216 SIPA1L3O60292 1781 aaPredicted RBP10.63□□□□□ -0.71
PABPC4-223ENST00000529216 MAPK8IP2Q13387 824 aaPredicted RBP10.63□□□□□ -0.71
PABPC4-223ENST00000529216 DOT1LQ8TEK3 1739 aa10.63□□□□□ -0.71
PABPC4-223ENST00000529216 CT47B1P0C2W7 299 aaPredicted RBP10.62□□□□□ -0.71
PABPC4-223ENST00000529216 PRIM1P49642 420 aaKnown RBP10.62□□□□□ -0.71
PABPC4-223ENST00000529216 ZNF790Q6PG37 636 aa10.62□□□□□ -0.71
PABPC4-223ENST00000529216 FAM196AQ6ZSG2 479 aa10.62□□□□□ -0.71
PABPC4-223ENST00000529216 PIGBQ92521 554 aa10.62□□□□□ -0.71
PABPC4-223ENST00000529216 MIS18AQ9NYP9 233 aa10.62□□□□□ -0.71
PABPC4-223ENST00000529216 NHSQ6T4R5 1651 aa10.62□□□□□ -0.71
PABPC4-223ENST00000529216 KDM3BQ7LBC6 1761 aa10.62□□□□□ -0.71
PABPC4-223ENST00000529216 SOS1Q07889 1333 aaPredicted RBP10.61□□□□□ -0.71
PABPC4-223ENST00000529216 EIF4A1P60842 406 aaKnown RBP10.61□□□□□ -0.71
PABPC4-223ENST00000529216 TTC5Q8N0Z6 440 aa10.61□□□□□ -0.71
PABPC4-223ENST00000529216 SYTL4Q96C24 671 aaPredicted RBP10.61□□□□□ -0.71
PABPC4-223ENST00000529216 ACSBG1Q96GR2 724 aa10.61□□□□□ -0.71
PABPC4-223ENST00000529216 HEG1Q9ULI3 1381 aa10.61□□□□□ -0.71
PABPC4-223ENST00000529216 KCPQ6ZWJ8 1503 aa10.6□□□□□ -0.71
PABPC4-223ENST00000529216 HOXB7P09629 217 aa10.6□□□□□ -0.71
PABPC4-223ENST00000529216 EXOSC9Q06265 439 aaKnown RBP10.6□□□□□ -0.71
PABPC4-223ENST00000529216 FAM182BQ5T319 152 aa10.6□□□□□ -0.71
PABPC4-223ENST00000529216 KCNQ2O43526 872 aa10.59□□□□□ -0.71
PABPC4-223ENST00000529216 SLC39A6Q13433 755 aa10.59□□□□□ -0.71
PABPC4-223ENST00000529216 ZNF428Q96B54 188 aa10.59□□□□□ -0.71
PABPC4-223ENST00000529216 FMNL2Q96PY5 1086 aa10.59□□□□□ -0.71
PABPC4-223ENST00000529216 BCL11BQ9C0K0 894 aaPredicted RBP10.59□□□□□ -0.71
PABPC4-223ENST00000529216 KCNQ3O43525 872 aa10.58□□□□□ -0.72
PABPC4-223ENST00000529216 TWISTNBQ3B726 338 aaPredicted RBP10.58□□□□□ -0.72
PABPC4-223ENST00000529216 C8orf58Q8NAV2 365 aa10.58□□□□□ -0.72
PABPC4-223ENST00000529216 SMARCC1Q92922 1105 aaPredicted RBP10.58□□□□□ -0.72
PABPC4-223ENST00000529216 ZNF496Q96IT1 587 aaPredicted RBP10.58□□□□□ -0.72
PABPC4-223ENST00000529216 ATG3Q9NT62 314 aa10.58□□□□□ -0.72
PABPC4-223ENST00000529216 ASAP1Q9ULH1 1129 aa10.58□□□□□ -0.72
PABPC4-223ENST00000529216 BRWD3Q6RI45 1802 aa10.58□□□□□ -0.72
PABPC4-223ENST00000529216 UBR2Q8IWV8 1755 aa10.57□□□□□ -0.72
PABPC4-223ENST00000529216 PALLDQ8WX93 1383 aa10.57□□□□□ -0.72
PABPC4-223ENST00000529216 KRT24Q2M2I5 525 aa10.57□□□□□ -0.72
PABPC4-223ENST00000529216 VSIG10Q8N0Z9 540 aa10.57□□□□□ -0.72
PABPC4-223ENST00000529216 TSPYL6Q8N831 410 aa10.57□□□□□ -0.72
PABPC4-223ENST00000529216 CHMP4AQ9BY43 222 aa10.57□□□□□ -0.72
PABPC4-223ENST00000529216 VIRMAQ69YN4 1812 aaKnown RBP10.56□□□□□ -0.72
PABPC4-223ENST00000529216 CICQ96RK0 1608 aaPredicted RBP10.56□□□□□ -0.72
PABPC4-223ENST00000529216 VAMP4O75379 141 aa10.56□□□□□ -0.72
PABPC4-223ENST00000529216 GIGYF1O75420 1035 aaPredicted RBP10.56□□□□□ -0.72
PABPC4-223ENST00000529216 SNRPA1P09661 255 aaKnown RBP10.56□□□□□ -0.72
PABPC4-223ENST00000529216 RCAN3Q9UKA8 241 aa10.56□□□□□ -0.72
PABPC4-223ENST00000529216 PTCD1O75127 700 aaKnown RBP10.55□□□□□ -0.72
PABPC4-223ENST00000529216 RARSP54136 660 aaKnown RBP10.55□□□□□ -0.72
PABPC4-223ENST00000529216 ALDH1L2Q3SY69 923 aa10.55□□□□□ -0.72
PABPC4-223ENST00000529216 PTF1AQ7RTS3 328 aa10.55□□□□□ -0.72
PABPC4-223ENST00000529216 ITGB4P16144 1822 aa10.55□□□□□ -0.72
PABPC4-223ENST00000529216 ELL2O00472 640 aaPredicted RBP10.54□□□□□ -0.72
PABPC4-223ENST00000529216 TRIM37O94972 964 aa10.54□□□□□ -0.72
PABPC4-223ENST00000529216 HDGFL1Q5TGJ6 251 aa10.54□□□□□ -0.72
PABPC4-223ENST00000529216 TEX13AQ9BXU3 409 aaPredicted RBP10.54□□□□□ -0.72
PABPC4-223ENST00000529216 ZNF831Q5JPB2 1677 aa10.53□□□□□ -0.72
PABPC4-223ENST00000529216 LOC102724428A0A0B4J2F2 783 aa10.53□□□□□ -0.72
PABPC4-223ENST00000529216 BRPF1P55201 1214 aaPredicted RBP10.53□□□□□ -0.72
PABPC4-223ENST00000529216 SIK1P57059 783 aa10.53□□□□□ -0.72
PABPC4-223ENST00000529216 CCDC30Q5VVM6 783 aa10.53□□□□□ -0.72
PABPC4-223ENST00000529216 RBM42Q9BTD8 480 aaKnown RBP10.53□□□□□ -0.72
PABPC4-223ENST00000529216 BTAF1O14981 1849 aa10.53□□□□□ -0.72
PABPC4-223ENST00000529216 ERBB4Q15303 1308 aa10.53□□□□□ -0.72
PABPC4-223ENST00000529216 SBF2Q86WG5 1849 aa10.52□□□□□ -0.73
PABPC4-223ENST00000529216 PRAMEF22A3QJZ6 481 aa10.52□□□□□ -0.73
PABPC4-223ENST00000529216 SSH1Q8WYL5 1049 aa10.52□□□□□ -0.73
PABPC4-223ENST00000529216 SLC4A9Q96Q91 983 aa10.52□□□□□ -0.73
PABPC4-223ENST00000529216 STK31Q9BXU1 1019 aa10.52□□□□□ -0.73
PABPC4-223ENST00000529216 SMC4Q9NTJ3 1288 aa10.52□□□□□ -0.73
PABPC4-223ENST00000529216 KIF16BQ96L93 1317 aa10.52□□□□□ -0.73
PABPC4-223ENST00000529216 LAMB4A4D0S4 1761 aa10.52□□□□□ -0.73
PABPC4-223ENST00000529216 C5P01031 1676 aa10.51□□□□□ -0.73
PABPC4-223ENST00000529216 TJP1Q07157 1748 aa10.51□□□□□ -0.73
PABPC4-223ENST00000529216 PLSCR1O15162 318 aa10.51□□□□□ -0.73
PABPC4-223ENST00000529216 STARD3NLO95772 234 aa10.51□□□□□ -0.73
PABPC4-223ENST00000529216 USP16Q9Y5T5 823 aa10.51□□□□□ -0.73
PABPC4-223ENST00000529216 RNF123Q5XPI4 1314 aa10.51□□□□□ -0.73
PABPC4-223ENST00000529216 TNS1Q9HBL0 1735 aaKnown RBP10.5□□□□□ -0.73
PABPC4-223ENST00000529216 CYP19A1P11511 503 aaPredicted RBP10.5□□□□□ -0.73
PABPC4-223ENST00000529216 EIF2S2P20042 333 aaKnown RBP10.5□□□□□ -0.73
PABPC4-223ENST00000529216 HMGB2P26583 209 aaKnown RBP10.5□□□□□ -0.73
PABPC4-223ENST00000529216 ATP6V1AP38606 617 aa10.5□□□□□ -0.73
PABPC4-223ENST00000529216 SLC27A3Q5K4L6 730 aa10.5□□□□□ -0.73
PABPC4-223ENST00000529216 DNAJC10Q8IXB1 793 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 265.3 ms