RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 ANKRD26Q9UPS8 1709 aa8.43□□□□□ -1.06
ATPAF1-209ENST00000529214 MAP2P11137 1827 aaKnown RBP8.43□□□□□ -1.06
ATPAF1-209ENST00000529214 EXOC5O00471 708 aa8.43□□□□□ -1.06
ATPAF1-209ENST00000529214 IL2RBP14784 551 aa8.43□□□□□ -1.06
ATPAF1-209ENST00000529214 PDE3BQ13370 1112 aa8.43□□□□□ -1.06
ATPAF1-209ENST00000529214 EIF4A2Q14240 407 aaKnown RBP8.43□□□□□ -1.06
ATPAF1-209ENST00000529214 DDB1Q16531 1140 aa8.43□□□□□ -1.06
ATPAF1-209ENST00000529214 FAM163AQ96GL9 167 aaPredicted RBP8.43□□□□□ -1.06
ATPAF1-209ENST00000529214 EYA1Q99502 592 aa8.43□□□□□ -1.06
ATPAF1-209ENST00000529214 ANP32EQ9BTT0 268 aa8.43□□□□□ -1.06
ATPAF1-209ENST00000529214 SMG6Q86US8 1419 aaKnown RBP8.42□□□□□ -1.06
ATPAF1-209ENST00000529214 PEAK1Q9H792 1746 aa8.42□□□□□ -1.06
ATPAF1-209ENST00000529214 APBB1O00213 710 aa8.42□□□□□ -1.06
ATPAF1-209ENST00000529214 PPP2R1AP30153 589 aa8.42□□□□□ -1.06
ATPAF1-209ENST00000529214 IL13P35225 146 aa8.42□□□□□ -1.06
ATPAF1-209ENST00000529214 LCE2DQ5TA82 110 aaPredicted RBP8.42□□□□□ -1.06
ATPAF1-209ENST00000529214 UPF1Q92900 1129 aaKnown RBP eCLIP8.42□□□□□ -1.06
ATPAF1-209ENST00000529214 DISP2A7MBM2 1401 aa8.41□□□□□ -1.06
ATPAF1-209ENST00000529214 GSE1Q14687 1217 aa8.41□□□□□ -1.06
ATPAF1-209ENST00000529214 FAM182BQ5T319 152 aa8.41□□□□□ -1.06
ATPAF1-209ENST00000529214 ASTLQ6HA08 431 aaPredicted RBP8.41□□□□□ -1.06
ATPAF1-209ENST00000529214 USHBP1Q8N6Y0 703 aa8.41□□□□□ -1.06
ATPAF1-209ENST00000529214 THSD7AQ9UPZ6 1657 aa8.4□□□□□ -1.06
ATPAF1-209ENST00000529214 ZMYND10O75800 440 aa8.4□□□□□ -1.06
ATPAF1-209ENST00000529214 POTEJP0CG39 1038 aa8.4□□□□□ -1.06
ATPAF1-209ENST00000529214 RALBP1Q15311 655 aa8.4□□□□□ -1.06
ATPAF1-209ENST00000529214 FAM196AQ6ZSG2 479 aa8.4□□□□□ -1.06
ATPAF1-209ENST00000529214 CCDC125Q86Z20 511 aa8.4□□□□□ -1.06
ATPAF1-209ENST00000529214 MARCH10Q8NA82 808 aaPredicted RBP8.4□□□□□ -1.06
ATPAF1-209ENST00000529214 RAPGEF4Q8WZA2 1011 aa8.4□□□□□ -1.06
ATPAF1-209ENST00000529214 ANO8Q9HCE9 1232 aaPredicted RBP8.4□□□□□ -1.06
ATPAF1-209ENST00000529214 SCUBE2Q9NQ36 999 aa8.4□□□□□ -1.06
ATPAF1-209ENST00000529214 PARD3Q8TEW0 1356 aa8.4□□□□□ -1.06
ATPAF1-209ENST00000529214 DIAPH1O60610 1272 aaKnown RBP8.39□□□□□ -1.07
ATPAF1-209ENST00000529214 TATP17735 454 aaPredicted RBP8.39□□□□□ -1.07
ATPAF1-209ENST00000529214 CDK11BP21127 795 aaKnown RBP8.39□□□□□ -1.07
ATPAF1-209ENST00000529214 ZCRB1Q8TBF4 217 aaKnown RBP8.39□□□□□ -1.07
ATPAF1-209ENST00000529214 IGSF1Q8N6C5 1336 aa8.39□□□□□ -1.07
ATPAF1-209ENST00000529214 NCAPD2Q15021 1401 aa8.38□□□□□ -1.07
ATPAF1-209ENST00000529214 BRWD3Q6RI45 1802 aa8.38□□□□□ -1.07
ATPAF1-209ENST00000529214 SULT6B1Q6IMI4 303 aa8.38□□□□□ -1.07
ATPAF1-209ENST00000529214 IL27Q8NEV9 243 aa8.38□□□□□ -1.07
ATPAF1-209ENST00000529214 DDX54Q8TDD1 881 aaKnown RBP8.38□□□□□ -1.07
ATPAF1-209ENST00000529214 CFAP53Q96M91 514 aa8.38□□□□□ -1.07
ATPAF1-209ENST00000529214 PRKRIP1Q9H875 184 aaPredicted RBP8.38□□□□□ -1.07
ATPAF1-209ENST00000529214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.38□□□□□ -1.07
ATPAF1-209ENST00000529214 EP400Q96L91 3159 aa8.37□□□□□ -1.07
ATPAF1-209ENST00000529214 RGPD2P0DJD1 1756 aa8.37□□□□□ -1.07
ATPAF1-209ENST00000529214 PARP4Q9UKK3 1724 aaKnown RBP8.37□□□□□ -1.07
ATPAF1-209ENST00000529214 FAM208AQ9UK61 1670 aaKnown RBP8.37□□□□□ -1.07
ATPAF1-209ENST00000529214 ATMINO43313 823 aaPredicted RBP8.37□□□□□ -1.07
ATPAF1-209ENST00000529214 AEBP1Q8IUX7 1158 aa8.37□□□□□ -1.07
ATPAF1-209ENST00000529214 DHX37Q8IY37 1157 aaKnown RBP8.37□□□□□ -1.07
ATPAF1-209ENST00000529214 KCTD17Q8N5Z5 321 aa8.37□□□□□ -1.07
ATPAF1-209ENST00000529214 BCL11BQ9C0K0 894 aaPredicted RBP8.37□□□□□ -1.07
ATPAF1-209ENST00000529214 MEGF6O75095 1541 aa8.36□□□□□ -1.07
ATPAF1-209ENST00000529214 OVOS2A0A0G2JMS6 1433 aa8.36□□□□□ -1.07
ATPAF1-209ENST00000529214 BCL9O00512 1426 aa8.36□□□□□ -1.07
ATPAF1-209ENST00000529214 TRIM37O94972 964 aa8.36□□□□□ -1.07
ATPAF1-209ENST00000529214 FGD1P98174 961 aa8.36□□□□□ -1.07
ATPAF1-209ENST00000529214 ARHGEF1Q92888 912 aaKnown RBP8.36□□□□□ -1.07
ATPAF1-209ENST00000529214 GPBP1L1Q9HC44 474 aaPredicted RBP8.36□□□□□ -1.07
ATPAF1-209ENST00000529214 SPG7Q9UQ90 795 aa8.36□□□□□ -1.07
ATPAF1-209ENST00000529214 NUDCQ9Y266 331 aa8.36□□□□□ -1.07
ATPAF1-209ENST00000529214 TNS2Q63HR2 1409 aa8.35□□□□□ -1.07
ATPAF1-209ENST00000529214 KDRP35968 1356 aa8.35□□□□□ -1.07
ATPAF1-209ENST00000529214 MYBBP1AQ9BQG0 1328 aaKnown RBP8.35□□□□□ -1.07
ATPAF1-209ENST00000529214 TESPA1A2RU30 521 aaPredicted RBP8.35□□□□□ -1.07
ATPAF1-209ENST00000529214 U2SURPO15042 1029 aaKnown RBP8.35□□□□□ -1.07
ATPAF1-209ENST00000529214 CYP27B1O15528 508 aa8.35□□□□□ -1.07
ATPAF1-209ENST00000529214 HMOX1P09601 288 aa8.35□□□□□ -1.07
ATPAF1-209ENST00000529214 PLEKHO1Q53GL0 409 aaPredicted RBP8.35□□□□□ -1.07
ATPAF1-209ENST00000529214 COL3A1P02461 1466 aaPredicted RBP8.35□□□□□ -1.07
ATPAF1-209ENST00000529214 PLEKHG2Q9H7P9 1386 aa8.34□□□□□ -1.07
ATPAF1-209ENST00000529214 LRRC37A3O60309 1634 aa8.34□□□□□ -1.07
ATPAF1-209ENST00000529214 SF3B2Q13435 895 aaKnown RBP8.34□□□□□ -1.07
ATPAF1-209ENST00000529214 AMOTQ4VCS5 1084 aa8.34□□□□□ -1.07
ATPAF1-209ENST00000529214 STK24Q9Y6E0 443 aa8.34□□□□□ -1.07
ATPAF1-209ENST00000529214 PCDH11XQ9BZA7 1347 aa8.33□□□□□ -1.08
ATPAF1-209ENST00000529214 PCDH11YQ9BZA8 1340 aa8.33□□□□□ -1.08
ATPAF1-209ENST00000529214 KCNQ2O43526 872 aa8.33□□□□□ -1.08
ATPAF1-209ENST00000529214 FCHSD2O94868 740 aa8.33□□□□□ -1.08
ATPAF1-209ENST00000529214 APBA3O96018 575 aa8.33□□□□□ -1.08
ATPAF1-209ENST00000529214 PTF1AQ7RTS3 328 aa8.33□□□□□ -1.08
ATPAF1-209ENST00000529214 DEFB132Q7Z7B7 95 aa8.33□□□□□ -1.08
ATPAF1-209ENST00000529214 IFNL2Q8IZJ0 200 aa8.33□□□□□ -1.08
ATPAF1-209ENST00000529214 WNK3Q9BYP7 1800 aa8.33□□□□□ -1.08
ATPAF1-209ENST00000529214 PLSCR1O15162 318 aa8.32□□□□□ -1.08
ATPAF1-209ENST00000529214 U2AF1L5P0DN76 240 aaPredicted RBP8.32□□□□□ -1.08
ATPAF1-209ENST00000529214 PHKG2P15735 406 aa8.32□□□□□ -1.08
ATPAF1-209ENST00000529214 BAG6P46379 1132 aa8.32□□□□□ -1.08
ATPAF1-209ENST00000529214 U2AF1Q01081 240 aaKnown RBP eCLIP8.32□□□□□ -1.08
ATPAF1-209ENST00000529214 MKRN3Q13064 507 aaKnown RBP8.32□□□□□ -1.08
ATPAF1-209ENST00000529214 ACSBG1Q96GR2 724 aa8.32□□□□□ -1.08
ATPAF1-209ENST00000529214 RGPD1P0DJD0 1748 aa8.32□□□□□ -1.08
ATPAF1-209ENST00000529214 SEMA3EO15041 775 aa8.32□□□□□ -1.08
ATPAF1-209ENST00000529214 ANP32CO43423 234 aa8.32□□□□□ -1.08
ATPAF1-209ENST00000529214 PRIM1P49642 420 aaKnown RBP8.32□□□□□ -1.08
ATPAF1-209ENST00000529214 EN1Q05925 392 aaPredicted RBP8.32□□□□□ -1.08
ATPAF1-209ENST00000529214 MS4A3Q96HJ5 214 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms