RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 TEX13AQ9BXU3 409 aaPredicted RBP10.3□□□□□ -0.76
SSBP3-211ENST00000528787 BTBD11A6QL63 1104 aa10.29□□□□□ -0.76
SSBP3-211ENST00000528787 RGPD3A6NKT7 1758 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-211ENST00000528787 RGPD4Q7Z3J3 1758 aa10.29□□□□□ -0.76
SSBP3-211ENST00000528787 KDM6AO15550 1401 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-211ENST00000528787 CT47B1P0C2W7 299 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-211ENST00000528787 VSIG10Q8N0Z9 540 aa10.28□□□□□ -0.76
SSBP3-211ENST00000528787 IL17REQ8NFR9 667 aa10.28□□□□□ -0.76
SSBP3-211ENST00000528787 ZNF428Q96B54 188 aa10.28□□□□□ -0.76
SSBP3-211ENST00000528787 TRIM35Q9UPQ4 493 aa10.28□□□□□ -0.76
SSBP3-211ENST00000528787 RRP7AQ9Y3A4 280 aaKnown RBP10.28□□□□□ -0.76
SSBP3-211ENST00000528787 SIPA1L3O60292 1781 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-211ENST00000528787 HOXB7P09629 217 aa10.27□□□□□ -0.77
SSBP3-211ENST00000528787 BAG6P46379 1132 aa10.27□□□□□ -0.77
SSBP3-211ENST00000528787 PRIM1P49642 420 aaKnown RBP10.27□□□□□ -0.77
SSBP3-211ENST00000528787 SLC27A3Q5K4L6 730 aa10.27□□□□□ -0.77
SSBP3-211ENST00000528787 MCM10Q7L590 875 aa10.27□□□□□ -0.77
SSBP3-211ENST00000528787 NFATC2IPQ8NCF5 419 aa10.27□□□□□ -0.77
SSBP3-211ENST00000528787 FMNL2Q96PY5 1086 aa10.27□□□□□ -0.77
SSBP3-211ENST00000528787 TSPYL4Q9UJ04 414 aa10.27□□□□□ -0.77
SSBP3-211ENST00000528787 ZNF831Q5JPB2 1677 aa10.27□□□□□ -0.77
SSBP3-211ENST00000528787 BTAF1O14981 1849 aa10.26□□□□□ -0.77
SSBP3-211ENST00000528787 PLSCR1O15162 318 aa10.26□□□□□ -0.77
SSBP3-211ENST00000528787 NPM2Q86SE8 214 aaKnown RBP10.26□□□□□ -0.77
SSBP3-211ENST00000528787 LGR6Q9HBX8 967 aa10.26□□□□□ -0.77
SSBP3-211ENST00000528787 CACNA1FO60840 1977 aa10.26□□□□□ -0.77
SSBP3-211ENST00000528787 KDM3BQ7LBC6 1761 aa10.25□□□□□ -0.77
SSBP3-211ENST00000528787 CHL1O00533 1208 aa10.25□□□□□ -0.77
SSBP3-211ENST00000528787 ZNF790Q6PG37 636 aa10.25□□□□□ -0.77
SSBP3-211ENST00000528787 LAS1LQ9Y4W2 734 aaKnown RBP10.25□□□□□ -0.77
SSBP3-211ENST00000528787 TOGARAM1Q9Y4F4 1720 aa10.24□□□□□ -0.77
SSBP3-211ENST00000528787 TRIM37O94972 964 aa10.24□□□□□ -0.77
SSBP3-211ENST00000528787 STARD3NLO95772 234 aa10.24□□□□□ -0.77
SSBP3-211ENST00000528787 APBA3O96018 575 aa10.24□□□□□ -0.77
SSBP3-211ENST00000528787 PIGBQ92521 554 aa10.24□□□□□ -0.77
SSBP3-211ENST00000528787 ACSBG1Q96GR2 724 aa10.24□□□□□ -0.77
SSBP3-211ENST00000528787 SALL2Q9Y467 1007 aaPredicted RBP10.24□□□□□ -0.77
SSBP3-211ENST00000528787 PAPPAQ13219 1627 aa10.24□□□□□ -0.77
SSBP3-211ENST00000528787 ZNF521Q96K83 1311 aa10.24□□□□□ -0.77
SSBP3-211ENST00000528787 SNRPA1P09661 255 aaKnown RBP10.23□□□□□ -0.77
SSBP3-211ENST00000528787 ZNF853P0CG23 659 aa10.23□□□□□ -0.77
SSBP3-211ENST00000528787 DCTN1Q14203 1278 aa10.23□□□□□ -0.77
SSBP3-211ENST00000528787 ERBB4Q15303 1308 aa10.23□□□□□ -0.77
SSBP3-211ENST00000528787 UBR2Q8IWV8 1755 aa10.23□□□□□ -0.77
SSBP3-211ENST00000528787 PALLDQ8WX93 1383 aa10.23□□□□□ -0.77
SSBP3-211ENST00000528787 CICQ96RK0 1608 aaPredicted RBP10.22□□□□□ -0.77
SSBP3-211ENST00000528787 LY75O60449 1722 aa10.21□□□□□ -0.77
SSBP3-211ENST00000528787 TNS1Q9HBL0 1735 aaKnown RBP10.21□□□□□ -0.77
SSBP3-211ENST00000528787 LOC102724428A0A0B4J2F2 783 aa10.21□□□□□ -0.77
SSBP3-211ENST00000528787 SIK1P57059 783 aa10.21□□□□□ -0.77
SSBP3-211ENST00000528787 SLFN5Q08AF3 891 aa10.21□□□□□ -0.77
SSBP3-211ENST00000528787 RBM42Q9BTD8 480 aaKnown RBP10.21□□□□□ -0.77
SSBP3-211ENST00000528787 STK31Q9BXU1 1019 aa10.21□□□□□ -0.77
SSBP3-211ENST00000528787 MBIPQ9NS73 344 aa10.21□□□□□ -0.77
SSBP3-211ENST00000528787 ATG3Q9NT62 314 aa10.21□□□□□ -0.77
SSBP3-211ENST00000528787 HEG1Q9ULI3 1381 aa10.21□□□□□ -0.78
SSBP3-211ENST00000528787 LAMB4A4D0S4 1761 aa10.2□□□□□ -0.78
SSBP3-211ENST00000528787 ATP6V1AP38606 617 aa10.2□□□□□ -0.78
SSBP3-211ENST00000528787 FAM182BQ5T319 152 aa10.2□□□□□ -0.78
SSBP3-211ENST00000528787 NBPF14Q5TI25 921 aa10.2□□□□□ -0.78
SSBP3-211ENST00000528787 CCDC30Q5VVM6 783 aa10.2□□□□□ -0.78
SSBP3-211ENST00000528787 THUMPD2Q9BTF0 503 aaKnown RBP10.2□□□□□ -0.78
SSBP3-211ENST00000528787 FANCIQ9NVI1 1328 aa10.2□□□□□ -0.78
SSBP3-211ENST00000528787 CCNL1Q9UK58 526 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-211ENST00000528787 KCNQ2O43526 872 aa10.19□□□□□ -0.78
SSBP3-211ENST00000528787 CENPBP07199 599 aaPredicted RBP10.19□□□□□ -0.78
SSBP3-211ENST00000528787 EIF4A1P60842 406 aaKnown RBP10.19□□□□□ -0.78
SSBP3-211ENST00000528787 TWISTNBQ3B726 338 aaPredicted RBP10.19□□□□□ -0.78
SSBP3-211ENST00000528787 FLAD1Q8NFF5 587 aa10.19□□□□□ -0.78
SSBP3-211ENST00000528787 YTHDC1Q96MU7 727 aaKnown RBP10.19□□□□□ -0.78
SSBP3-211ENST00000528787 ASAP1Q9ULH1 1129 aa10.19□□□□□ -0.78
SSBP3-211ENST00000528787 A0A087WZG4 1122 aa10.18□□□□□ -0.78
SSBP3-211ENST00000528787 PTCD1O75127 700 aaKnown RBP10.18□□□□□ -0.78
SSBP3-211ENST00000528787 GIGYF1O75420 1035 aaPredicted RBP10.18□□□□□ -0.78
SSBP3-211ENST00000528787 ALDH1L2Q3SY69 923 aa10.18□□□□□ -0.78
SSBP3-211ENST00000528787 RC3H1Q5TC82 1133 aaKnown RBP10.18□□□□□ -0.78
SSBP3-211ENST00000528787 TRMT2AQ8IZ69 625 aaKnown RBP10.18□□□□□ -0.78
SSBP3-211ENST00000528787 C5P01031 1676 aa10.18□□□□□ -0.78
SSBP3-211ENST00000528787 KCPQ6ZWJ8 1503 aa10.17□□□□□ -0.78
SSBP3-211ENST00000528787 TAF1LQ8IZX4 1826 aa10.17□□□□□ -0.78
SSBP3-211ENST00000528787 CNTNAP4Q9C0A0 1308 aa10.17□□□□□ -0.78
SSBP3-211ENST00000528787 RGL2O15211 777 aa10.17□□□□□ -0.78
SSBP3-211ENST00000528787 ADRA2BP18089 450 aa10.17□□□□□ -0.78
SSBP3-211ENST00000528787 SLC39A6Q13433 755 aa10.17□□□□□ -0.78
SSBP3-211ENST00000528787 TXNRD1Q16881 649 aa10.17□□□□□ -0.78
SSBP3-211ENST00000528787 HDGFL1Q5TGJ6 251 aa10.17□□□□□ -0.78
SSBP3-211ENST00000528787 DUSP27Q5VZP5 1158 aa10.17□□□□□ -0.78
SSBP3-211ENST00000528787 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.17□□□□□ -0.78
SSBP3-211ENST00000528787 ZNF496Q96IT1 587 aaPredicted RBP10.17□□□□□ -0.78
SSBP3-211ENST00000528787 AK7Q96M32 723 aa10.17□□□□□ -0.78
SSBP3-211ENST00000528787 HYPKQ9NX55 129 aa10.17□□□□□ -0.78
SSBP3-211ENST00000528787 DBF4Q9UBU7 674 aaPredicted RBP10.17□□□□□ -0.78
SSBP3-211ENST00000528787 IPO8O15397 1037 aaKnown RBP10.16□□□□□ -0.78
SSBP3-211ENST00000528787 DDX58O95786 925 aaKnown RBP10.16□□□□□ -0.78
SSBP3-211ENST00000528787 MS4A1P11836 297 aa10.16□□□□□ -0.78
SSBP3-211ENST00000528787 UPF1Q92900 1129 aaKnown RBP eCLIP10.16□□□□□ -0.78
SSBP3-211ENST00000528787 MIS18AQ9NYP9 233 aa10.16□□□□□ -0.78
SSBP3-211ENST00000528787 EP400Q96L91 3159 aa10.16□□□□□ -0.78
SSBP3-211ENST00000528787 COL5A3P25940 1745 aaPredicted RBP10.16□□□□□ -0.78
SSBP3-211ENST00000528787 IL6STP40189 918 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms