RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 PTCD1O75127 700 aaKnown RBP19.11■□□□□ 0.65
CAPN1-216ENST00000528739 PTGER2P43116 358 aa19.11■□□□□ 0.65
CAPN1-216ENST00000528739 COL23A1Q86Y22 540 aaPredicted RBP19.11■□□□□ 0.65
CAPN1-216ENST00000528739 LGR6Q9HBX8 967 aa19.11■□□□□ 0.65
CAPN1-216ENST00000528739 ITGB4P16144 1822 aa19.11■□□□□ 0.65
CAPN1-216ENST00000528739 LY75O60449 1722 aa19.11■□□□□ 0.65
CAPN1-216ENST00000528739 RNMTO43148 476 aaKnown RBP19.1■□□□□ 0.65
CAPN1-216ENST00000528739 PRKAR2BP31323 418 aa19.1■□□□□ 0.65
CAPN1-216ENST00000528739 FLAD1Q8NFF5 587 aa19.1■□□□□ 0.65
CAPN1-216ENST00000528739 GAS2L2Q8NHY3 880 aa19.1■□□□□ 0.65
CAPN1-216ENST00000528739 ARXQ96QS3 562 aa19.1■□□□□ 0.65
CAPN1-216ENST00000528739 CASZ1Q86V15 1759 aa19.09■□□□□ 0.65
CAPN1-216ENST00000528739 ITPK1Q13572 414 aa19.09■□□□□ 0.65
CAPN1-216ENST00000528739 MSL1Q68DK7 614 aa19.09■□□□□ 0.65
CAPN1-216ENST00000528739 LINC00116Q8NCU8 138 aa19.09■□□□□ 0.65
CAPN1-216ENST00000528739 GNPATO15228 680 aa19.08■□□□□ 0.64
CAPN1-216ENST00000528739 SMIM5Q71RC9 77 aa19.08■□□□□ 0.64
CAPN1-216ENST00000528739 COL3A1P02461 1466 aaPredicted RBP19.08■□□□□ 0.64
CAPN1-216ENST00000528739 NEFMP07197 916 aa19.07■□□□□ 0.64
CAPN1-216ENST00000528739 FHDC1Q9C0D6 1143 aaPredicted RBP19.07■□□□□ 0.64
CAPN1-216ENST00000528739 SLC52A2Q9HAB3 445 aa19.07■□□□□ 0.64
CAPN1-216ENST00000528739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.06■□□□□ 0.64
CAPN1-216ENST00000528739 GNAT3A8MTJ3 354 aa19.06■□□□□ 0.64
CAPN1-216ENST00000528739 TEFQ10587 303 aa19.05■□□□□ 0.64
CAPN1-216ENST00000528739 RSPH6AQ9H0K4 717 aa19.05■□□□□ 0.64
CAPN1-216ENST00000528739 SLC39A6Q13433 755 aa19.04■□□□□ 0.64
CAPN1-216ENST00000528739 RALBP1Q15311 655 aa19.04■□□□□ 0.64
CAPN1-216ENST00000528739 PHACTR3Q96KR7 559 aa19.04■□□□□ 0.64
CAPN1-216ENST00000528739 SGIP1Q9BQI5 828 aa19.04■□□□□ 0.64
CAPN1-216ENST00000528739 RTCBQ9Y3I0 505 aaKnown RBP19.04■□□□□ 0.64
CAPN1-216ENST00000528739 FCHSD2O94868 740 aa19.03■□□□□ 0.64
CAPN1-216ENST00000528739 SSFA2P28290 1259 aa19.03■□□□□ 0.64
CAPN1-216ENST00000528739 RTF1Q92541 710 aaKnown RBP19.03■□□□□ 0.64
CAPN1-216ENST00000528739 SLC4A9Q96Q91 983 aa19.03■□□□□ 0.64
CAPN1-216ENST00000528739 SYT17Q9BSW7 474 aa19.03■□□□□ 0.64
CAPN1-216ENST00000528739 C5P01031 1676 aa19.03■□□□□ 0.64
CAPN1-216ENST00000528739 TRAPPC3LQ5T215 181 aa19.02■□□□□ 0.64
CAPN1-216ENST00000528739 TTC5Q8N0Z6 440 aa19.02■□□□□ 0.64
CAPN1-216ENST00000528739 MAP3K5Q99683 1374 aa19.02■□□□□ 0.64
CAPN1-216ENST00000528739 C4BP0C0L5 1744 aa19.01■□□□□ 0.63
CAPN1-216ENST00000528739 AMIGO3Q86WK7 504 aa19.01■□□□□ 0.63
CAPN1-216ENST00000528739 PELP1Q8IZL8 1130 aaKnown RBP18.99■□□□□ 0.63
CAPN1-216ENST00000528739 IL17REQ8NFR9 667 aa18.99■□□□□ 0.63
CAPN1-216ENST00000528739 RFC4P35249 363 aa18.98■□□□□ 0.63
CAPN1-216ENST00000528739 CRKLP46109 303 aaKnown RBP18.98■□□□□ 0.63
CAPN1-216ENST00000528739 RC3H1Q5TC82 1133 aaKnown RBP18.98■□□□□ 0.63
CAPN1-216ENST00000528739 DNAJC10Q8IXB1 793 aa18.97■□□□□ 0.63
CAPN1-216ENST00000528739 PNNQ9H307 717 aaKnown RBP18.97■□□□□ 0.63
CAPN1-216ENST00000528739 TUBGCP6Q96RT7 1819 aa18.97■□□□□ 0.63
CAPN1-216ENST00000528739 CNTNAP4Q9C0A0 1308 aa18.97■□□□□ 0.63
CAPN1-216ENST00000528739 TAF1LQ8IZX4 1826 aa18.96■□□□□ 0.63
CAPN1-216ENST00000528739 RPS6KA4O75676 772 aa18.96■□□□□ 0.63
CAPN1-216ENST00000528739 ARHGEF1Q92888 912 aaKnown RBP18.96■□□□□ 0.63
CAPN1-216ENST00000528739 QSER1Q2KHR3 1735 aa18.96■□□□□ 0.63
CAPN1-216ENST00000528739 MAPK8IP3Q9UPT6 1336 aa18.96■□□□□ 0.63
CAPN1-216ENST00000528739 BTBD11A6QL63 1104 aa18.95■□□□□ 0.62
CAPN1-216ENST00000528739 MCM10Q7L590 875 aa18.95■□□□□ 0.62
CAPN1-216ENST00000528739 MYBBP1AQ9BQG0 1328 aaKnown RBP18.95■□□□□ 0.62
CAPN1-216ENST00000528739 SCN11AQ9UI33 1791 aa18.94■□□□□ 0.62
CAPN1-216ENST00000528739 DCTN1Q14203 1278 aa18.94■□□□□ 0.62
CAPN1-216ENST00000528739 GPR162Q16538 588 aa18.94■□□□□ 0.62
CAPN1-216ENST00000528739 ADRA2BP18089 450 aa18.93■□□□□ 0.62
CAPN1-216ENST00000528739 CCDC87Q9NVE4 849 aa18.93■□□□□ 0.62
CAPN1-216ENST00000528739 ZNF790Q6PG37 636 aa18.92■□□□□ 0.62
CAPN1-216ENST00000528739 STARD3NLO95772 234 aa18.91■□□□□ 0.62
CAPN1-216ENST00000528739 WDR43Q15061 677 aaKnown RBP eCLIP18.91■□□□□ 0.62
CAPN1-216ENST00000528739 NLGN1Q8N2Q7 840 aa18.91■□□□□ 0.62
CAPN1-216ENST00000528739 NLGN2Q8NFZ4 835 aa18.91■□□□□ 0.62
CAPN1-216ENST00000528739 MRC1P22897 1456 aa18.9■□□□□ 0.62
CAPN1-216ENST00000528739 ZPR1O75312 459 aa18.9■□□□□ 0.62
CAPN1-216ENST00000528739 MMP10P09238 476 aa18.9■□□□□ 0.62
CAPN1-216ENST00000528739 CYP19A1P11511 503 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-216ENST00000528739 CANXP27824 592 aaKnown RBP18.9■□□□□ 0.62
CAPN1-216ENST00000528739 INTS5Q6P9B9 1019 aaKnown RBP18.9■□□□□ 0.62
CAPN1-216ENST00000528739 VSIG10Q8N0Z9 540 aa18.9■□□□□ 0.62
CAPN1-216ENST00000528739 ZNF496Q96IT1 587 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-216ENST00000528739 FMNL2Q96PY5 1086 aa18.9■□□□□ 0.62
CAPN1-216ENST00000528739 ZNF330Q9Y3S2 320 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-216ENST00000528739 HTATSF1O43719 755 aaKnown RBP18.89■□□□□ 0.61
CAPN1-216ENST00000528739 NPM2Q86SE8 214 aaKnown RBP18.89■□□□□ 0.61
CAPN1-216ENST00000528739 SRP68Q9UHB9 627 aaKnown RBP18.89■□□□□ 0.61
CAPN1-216ENST00000528739 UBR3Q6ZT12 1888 aa18.88■□□□□ 0.61
CAPN1-216ENST00000528739 KCNQ3O43525 872 aa18.88■□□□□ 0.61
CAPN1-216ENST00000528739 YY1P25490 414 aa18.88■□□□□ 0.61
CAPN1-216ENST00000528739 NFE2L2Q16236 605 aa18.88■□□□□ 0.61
CAPN1-216ENST00000528739 PLEKHF1Q96S99 279 aa18.88■□□□□ 0.61
CAPN1-216ENST00000528739 TEX13AQ9BXU3 409 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-216ENST00000528739 PARP3Q9Y6F1 533 aa18.88■□□□□ 0.61
CAPN1-216ENST00000528739 ZNF316A6NFI3 1004 aaPredicted RBP18.87■□□□□ 0.61
CAPN1-216ENST00000528739 GYS1P13807 737 aa18.87■□□□□ 0.61
CAPN1-216ENST00000528739 CEMIPQ8WUJ3 1361 aa18.87■□□□□ 0.61
CAPN1-216ENST00000528739 PRKRIP1Q9H875 184 aaPredicted RBP18.87■□□□□ 0.61
CAPN1-216ENST00000528739 ZBTB1Q9Y2K1 713 aa18.87■□□□□ 0.61
CAPN1-216ENST00000528739 CD2APQ9Y5K6 639 aa18.87■□□□□ 0.61
CAPN1-216ENST00000528739 HEG1Q9ULI3 1381 aa18.86■□□□□ 0.61
CAPN1-216ENST00000528739 TAF7Q15545 349 aaPredicted RBP18.86■□□□□ 0.61
CAPN1-216ENST00000528739 CCDC146Q8IYE0 955 aa18.86■□□□□ 0.61
CAPN1-216ENST00000528739 MIS18AQ9NYP9 233 aa18.86■□□□□ 0.61
CAPN1-216ENST00000528739 WWC3Q9ULE0 1092 aa18.86■□□□□ 0.61
CAPN1-216ENST00000528739 USPL1Q5W0Q7 1092 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms