RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	SLC4A10	Q6U841	1118 aa		28.76	■■■□□ 2.19
GSDMD-208	ENST00000528475	SALL3	Q9BXA9	1300 aa		28.75	■■■□□ 2.19
GSDMD-208	ENST00000528475	APBB1	O00213	710 aa		28.75	■■■□□ 2.19
GSDMD-208	ENST00000528475	GAS2L3	Q86XJ1	694 aa		28.75	■■■□□ 2.19
GSDMD-208	ENST00000528475	NGDN	Q8NEJ9	315 aa	Known RBP	28.75	■■■□□ 2.19
GSDMD-208	ENST00000528475	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	28.75	■■■□□ 2.19
GSDMD-208	ENST00000528475	ANKAR	Q7Z5J8	1434 aa		28.75	■■■□□ 2.19
GSDMD-208	ENST00000528475	RGPD8	O14715	1765 aa	Predicted RBP	28.75	■■■□□ 2.19
GSDMD-208	ENST00000528475	BABAM1	Q9NWV8	329 aa		28.74	■■■□□ 2.19
GSDMD-208	ENST00000528475	TUBGCP6	Q96RT7	1819 aa		28.74	■■■□□ 2.19
GSDMD-208	ENST00000528475	CCDC30	Q5VVM6	783 aa		28.74	■■■□□ 2.19
GSDMD-208	ENST00000528475	CACNA1F	O60840	1977 aa		28.74	■■■□□ 2.19
GSDMD-208	ENST00000528475	GNAI3	P08754	354 aa		28.73	■■■□□ 2.19
GSDMD-208	ENST00000528475	CLCN1	P35523	988 aa		28.73	■■■□□ 2.19
GSDMD-208	ENST00000528475	NWD1	Q149M9	1564 aa		28.72	■■■□□ 2.19
GSDMD-208	ENST00000528475	THEMIS	Q8N1K5	641 aa	Predicted RBP	28.72	■■■□□ 2.19
GSDMD-208	ENST00000528475	PXDNL	A1KZ92	1463 aa		28.72	■■■□□ 2.19
GSDMD-208	ENST00000528475	GNAT3	A8MTJ3	354 aa		28.71	■■■□□ 2.19
GSDMD-208	ENST00000528475	FLII	Q13045	1269 aa		28.71	■■■□□ 2.19
GSDMD-208	ENST00000528475	MARF1	Q9Y4F3	1742 aa	Known RBP	28.71	■■■□□ 2.19
GSDMD-208	ENST00000528475	ATP8B2	P98198	1209 aa		28.7	■■■□□ 2.18
GSDMD-208	ENST00000528475	LRRCC1	Q9C099	1032 aa		28.68	■■■□□ 2.18
GSDMD-208	ENST00000528475	MAP3K5	Q99683	1374 aa		28.67	■■■□□ 2.18
GSDMD-208	ENST00000528475	HOXC9	P31274	260 aa		28.67	■■■□□ 2.18
GSDMD-208	ENST00000528475	DDX49	Q9Y6V7	483 aa	Known RBP	28.67	■■■□□ 2.18
GSDMD-208	ENST00000528475	FKBP5	Q13451	457 aa	Predicted RBP	28.66	■■■□□ 2.18
GSDMD-208	ENST00000528475	EXOC6B	Q9Y2D4	811 aa		28.66	■■■□□ 2.18
GSDMD-208	ENST00000528475	NLRP6	P59044	892 aa		28.65	■■■□□ 2.18
GSDMD-208	ENST00000528475	STAP2	Q9UGK3	403 aa		28.65	■■■□□ 2.18
GSDMD-208	ENST00000528475	ESYT1	Q9BSJ8	1104 aa		28.64	■■■□□ 2.18
GSDMD-208	ENST00000528475	SRCIN1	Q9C0H9	1055 aa		28.64	■■■□□ 2.18
GSDMD-208	ENST00000528475	AK9	Q5TCS8	1911 aa		28.64	■■■□□ 2.18
GSDMD-208	ENST00000528475	MX1	P20591	662 aa		28.63	■■■□□ 2.17
GSDMD-208	ENST00000528475	MCM2	P49736	904 aa		28.63	■■■□□ 2.17
GSDMD-208	ENST00000528475	TAF7	Q15545	349 aa	Predicted RBP	28.63	■■■□□ 2.17
GSDMD-208	ENST00000528475	LMBRD1	Q9NUN5	540 aa		28.63	■■■□□ 2.17
GSDMD-208	ENST00000528475	AOX1	Q06278	1338 aa		28.62	■■■□□ 2.17
GSDMD-208	ENST00000528475	ZNF445	P59923	1031 aa		28.62	■■■□□ 2.17
GSDMD-208	ENST00000528475	MCTP1	Q6DN14	999 aa		28.62	■■■□□ 2.17
GSDMD-208	ENST00000528475	IL17RE	Q8NFR9	667 aa		28.62	■■■□□ 2.17
GSDMD-208	ENST00000528475	IL17RA	Q96F46	866 aa		28.62	■■■□□ 2.17
GSDMD-208	ENST00000528475	PNMA6E	A0A0J9YXQ4	647 aa		28.62	■■■□□ 2.17
GSDMD-208	ENST00000528475	ANAPC15	P60006	121 aa		28.61	■■■□□ 2.17
GSDMD-208	ENST00000528475	ZGPAT	Q8N5A5	531 aa	Known RBP	28.6	■■■□□ 2.17
GSDMD-208	ENST00000528475	PKP1	Q13835	747 aa		28.59	■■■□□ 2.17
GSDMD-208	ENST00000528475	ESPN	B1AK53	854 aa		28.58	■■■□□ 2.17
GSDMD-208	ENST00000528475	EPB41L2	O43491	1005 aa	Known RBP	28.58	■■■□□ 2.17
GSDMD-208	ENST00000528475	MCC	P23508	829 aa		28.58	■■■□□ 2.17
GSDMD-208	ENST00000528475	PPP1R9B	Q96SB3	815 aa		28.58	■■■□□ 2.17
GSDMD-208	ENST00000528475	ZDHHC9	Q9Y397	364 aa		28.58	■■■□□ 2.17
GSDMD-208	ENST00000528475	CHML	P26374	656 aa		28.57	■■■□□ 2.16
GSDMD-208	ENST00000528475	CCDC173	Q0VFZ6	552 aa		28.57	■■■□□ 2.16
GSDMD-208	ENST00000528475	TRIM44	Q96DX7	344 aa	Predicted RBP	28.57	■■■□□ 2.16
GSDMD-208	ENST00000528475	USP44	Q9H0E7	712 aa		28.57	■■■□□ 2.16
GSDMD-208	ENST00000528475	LRRFIP2	Q9Y608	721 aa	Known RBP	28.57	■■■□□ 2.16
GSDMD-208	ENST00000528475	NEK4	P51957	841 aa		28.55	■■■□□ 2.16
GSDMD-208	ENST00000528475	CUL4A	Q13619	759 aa		28.55	■■■□□ 2.16
GSDMD-208	ENST00000528475	SSH3	Q8TE77	659 aa		28.55	■■■□□ 2.16
GSDMD-208	ENST00000528475	ADAMTSL3	P82987	1691 aa		28.55	■■■□□ 2.16
GSDMD-208	ENST00000528475	MED1	Q15648	1581 aa	Predicted RBP	28.54	■■■□□ 2.16
GSDMD-208	ENST00000528475	NASP	P49321	788 aa	Predicted RBP	28.54	■■■□□ 2.16
GSDMD-208	ENST00000528475	TMX3	Q96JJ7	454 aa		28.54	■■■□□ 2.16
GSDMD-208	ENST00000528475	UBTFL1	P0CB47	393 aa	Predicted RBP	28.54	■■■□□ 2.16
GSDMD-208	ENST00000528475	TSHZ3	Q63HK5	1081 aa		28.54	■■■□□ 2.16
GSDMD-208	ENST00000528475	CEMIP	Q8WUJ3	1361 aa		28.53	■■■□□ 2.16
GSDMD-208	ENST00000528475	RAB11FIP3	O75154	756 aa		28.52	■■■□□ 2.16
GSDMD-208	ENST00000528475	NECTIN2	Q92692	538 aa		28.52	■■■□□ 2.16
GSDMD-208	ENST00000528475	ABTB2	Q8N961	1025 aa		28.52	■■■□□ 2.16
GSDMD-208	ENST00000528475	ERBB4	Q15303	1308 aa		28.51	■■■□□ 2.15
GSDMD-208	ENST00000528475	ZSCAN23	Q3MJ62	389 aa		28.51	■■■□□ 2.15
GSDMD-208	ENST00000528475	HDGFL1	Q5TGJ6	251 aa		28.51	■■■□□ 2.15
GSDMD-208	ENST00000528475	INTS4	Q96HW7	963 aa	Known RBP	28.51	■■■□□ 2.15
GSDMD-208	ENST00000528475	POLA2	Q14181	598 aa		28.5	■■■□□ 2.15
GSDMD-208	ENST00000528475	TRIM6-TRIM34	B2RNG4	842 aa		28.5	■■■□□ 2.15
GSDMD-208	ENST00000528475	HOXB7	P09629	217 aa		28.5	■■■□□ 2.15
GSDMD-208	ENST00000528475	KCNA6	P17658	529 aa		28.5	■■■□□ 2.15
GSDMD-208	ENST00000528475	CAVIN1	Q6NZI2	390 aa	Known RBP	28.5	■■■□□ 2.15
GSDMD-208	ENST00000528475	RILPL2	Q969X0	211 aa		28.49	■■■□□ 2.15
GSDMD-208	ENST00000528475	CHMP4A	Q9BY43	222 aa		28.49	■■■□□ 2.15
GSDMD-208	ENST00000528475	ANP32B	Q92688	251 aa	Known RBP	28.49	■■■□□ 2.15
GSDMD-208	ENST00000528475	PALD1	Q9ULE6	856 aa		28.49	■■■□□ 2.15
GSDMD-208	ENST00000528475	LTN1	O94822	1766 aa		28.48	■■■□□ 2.15
GSDMD-208	ENST00000528475	NUTM2G	Q5VZR2	741 aa		28.48	■■■□□ 2.15
GSDMD-208	ENST00000528475	ANO2	Q9NQ90	1003 aa		28.48	■■■□□ 2.15
GSDMD-208	ENST00000528475	PRPF40A	O75400	957 aa	Known RBP	28.47	■■■□□ 2.15
GSDMD-208	ENST00000528475	KDM3B	Q7LBC6	1761 aa		28.47	■■■□□ 2.15
GSDMD-208	ENST00000528475	BRD1	O95696	1058 aa		28.46	■■■□□ 2.15
GSDMD-208	ENST00000528475	GPT2	Q8TD30	523 aa		28.46	■■■□□ 2.15
GSDMD-208	ENST00000528475	IP6K1	Q92551	441 aa		28.46	■■■□□ 2.15
GSDMD-208	ENST00000528475	NCL	P19338	710 aa	Known RBP	28.46	■■■□□ 2.15
GSDMD-208	ENST00000528475	LTV1	Q96GA3	475 aa	Predicted RBP	28.46	■■■□□ 2.15
GSDMD-208	ENST00000528475	PHAX	Q9H814	394 aa	Known RBP	28.46	■■■□□ 2.15
GSDMD-208	ENST00000528475	NFAT5	O94916	1531 aa		28.45	■■■□□ 2.14
GSDMD-208	ENST00000528475	UNC5CL	Q8IV45	518 aa		28.45	■■■□□ 2.14
GSDMD-208	ENST00000528475	EIF4A1	P60842	406 aa	Known RBP	28.44	■■■□□ 2.14
GSDMD-208	ENST00000528475	PPP1R42	Q7Z4L9	355 aa		28.44	■■■□□ 2.14
GSDMD-208	ENST00000528475	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.43	■■■□□ 2.14
GSDMD-208	ENST00000528475	ANKLE2	Q86XL3	938 aa		28.42	■■■□□ 2.14
GSDMD-208	ENST00000528475	ZNF142	P52746	1687 aa	Predicted RBP	28.42	■■■□□ 2.14
GSDMD-208	ENST00000528475	MBD3	O95983	291 aa		28.42	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms