RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 HMMRO75330 724 aa9.15□□□□□ -0.94
C11orf54-207ENST00000528288 SIRT1Q96EB6 747 aa9.15□□□□□ -0.94
C11orf54-207ENST00000528288 UPF3BQ9BZI7 483 aaKnown RBP9.15□□□□□ -0.94
C11orf54-207ENST00000528288 ANO2Q9NQ90 1003 aa9.15□□□□□ -0.94
C11orf54-207ENST00000528288 ITSN1Q15811 1721 aa9.15□□□□□ -0.94
C11orf54-207ENST00000528288 SETD1BQ9UPS6 1966 aaKnown RBP9.15□□□□□ -0.94
C11orf54-207ENST00000528288 KCNQ3O43525 872 aa9.15□□□□□ -0.94
C11orf54-207ENST00000528288 KCNA6P17658 529 aa9.15□□□□□ -0.94
C11orf54-207ENST00000528288 ERC2O15083 957 aa9.15□□□□□ -0.94
C11orf54-207ENST00000528288 IL25Q9H293 177 aa9.15□□□□□ -0.94
C11orf54-207ENST00000528288 KIAA0232Q92628 1395 aa9.15□□□□□ -0.95
C11orf54-207ENST00000528288 GNAT3A8MTJ3 354 aa9.15□□□□□ -0.95
C11orf54-207ENST00000528288 TECPR2O15040 1411 aa9.14□□□□□ -0.95
C11orf54-207ENST00000528288 HOXC9P31274 260 aa9.14□□□□□ -0.95
C11orf54-207ENST00000528288 CCT4P50991 539 aaKnown RBP9.14□□□□□ -0.95
C11orf54-207ENST00000528288 LGR6Q9HBX8 967 aa9.14□□□□□ -0.95
C11orf54-207ENST00000528288 GOLGA6L22H0YM25 854 aa9.14□□□□□ -0.95
C11orf54-207ENST00000528288 HAP1P54257 671 aaPredicted RBP9.14□□□□□ -0.95
C11orf54-207ENST00000528288 LMOD2Q6P5Q4 547 aa9.14□□□□□ -0.95
C11orf54-207ENST00000528288 LRRCC1Q9C099 1032 aa9.14□□□□□ -0.95
C11orf54-207ENST00000528288 FLT4P35916 1363 aa9.14□□□□□ -0.95
C11orf54-207ENST00000528288 ST18O60284 1047 aa9.14□□□□□ -0.95
C11orf54-207ENST00000528288 NSFL1CQ9UNZ2 370 aaKnown RBP9.14□□□□□ -0.95
C11orf54-207ENST00000528288 ZDHHC9Q9Y397 364 aa9.14□□□□□ -0.95
C11orf54-207ENST00000528288 AKAP12Q02952 1782 aa9.13□□□□□ -0.95
C11orf54-207ENST00000528288 MX1P20591 662 aa9.13□□□□□ -0.95
C11orf54-207ENST00000528288 CCDC30Q5VVM6 783 aa9.13□□□□□ -0.95
C11orf54-207ENST00000528288 LRRC59Q96AG4 307 aaKnown RBP9.13□□□□□ -0.95
C11orf54-207ENST00000528288 REC8O95072 547 aa9.13□□□□□ -0.95
C11orf54-207ENST00000528288 HDGFL1Q5TGJ6 251 aa9.13□□□□□ -0.95
C11orf54-207ENST00000528288 TRIM44Q96DX7 344 aaPredicted RBP9.13□□□□□ -0.95
C11orf54-207ENST00000528288 IGSF1Q8N6C5 1336 aa9.13□□□□□ -0.95
C11orf54-207ENST00000528288 SBNO1A3KN83 1393 aa9.12□□□□□ -0.95
C11orf54-207ENST00000528288 KIF24Q5T7B8 1368 aa9.12□□□□□ -0.95
C11orf54-207ENST00000528288 USP44Q9H0E7 712 aa9.12□□□□□ -0.95
C11orf54-207ENST00000528288 GDPD2Q9HCC8 539 aa9.12□□□□□ -0.95
C11orf54-207ENST00000528288 USP31Q70CQ4 1352 aa9.12□□□□□ -0.95
C11orf54-207ENST00000528288 SURF6O75683 361 aaKnown RBP9.12□□□□□ -0.95
C11orf54-207ENST00000528288 DDX54Q8TDD1 881 aaKnown RBP9.12□□□□□ -0.95
C11orf54-207ENST00000528288 TMX3Q96JJ7 454 aa9.12□□□□□ -0.95
C11orf54-207ENST00000528288 ARHGEF10O15013 1369 aa9.12□□□□□ -0.95
C11orf54-207ENST00000528288 UBTFL1P0CB47 393 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-207ENST00000528288 SKOR2Q2VWA4 1001 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-207ENST00000528288 ESYT1Q9BSJ8 1104 aa9.12□□□□□ -0.95
C11orf54-207ENST00000528288 LMBRD1Q9NUN5 540 aa9.12□□□□□ -0.95
C11orf54-207ENST00000528288 PLEKHG1Q9ULL1 1385 aa9.12□□□□□ -0.95
C11orf54-207ENST00000528288 RGPD8O14715 1765 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-207ENST00000528288 NBPF7P0C2Y1 421 aaPredicted RBP9.11□□□□□ -0.95
C11orf54-207ENST00000528288 ATP8B2P98198 1209 aa9.11□□□□□ -0.95
C11orf54-207ENST00000528288 MPRIPQ6WCQ1 1025 aa9.11□□□□□ -0.95
C11orf54-207ENST00000528288 NASPP49321 788 aaPredicted RBP9.11□□□□□ -0.95
C11orf54-207ENST00000528288 TAF7Q15545 349 aaPredicted RBP9.11□□□□□ -0.95
C11orf54-207ENST00000528288 PPP1R42Q7Z4L9 355 aa9.11□□□□□ -0.95
C11orf54-207ENST00000528288 CHMLP26374 656 aa9.11□□□□□ -0.95
C11orf54-207ENST00000528288 NBPF6Q5VWK0 638 aa9.11□□□□□ -0.95
C11orf54-207ENST00000528288 GPT2Q8TD30 523 aa9.11□□□□□ -0.95
C11orf54-207ENST00000528288 NBPF4Q96M43 638 aa9.11□□□□□ -0.95
C11orf54-207ENST00000528288 CHPF2Q9P2E5 772 aa9.11□□□□□ -0.95
C11orf54-207ENST00000528288 ESPNB1AK53 854 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 UBR1Q8IWV7 1749 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 PRAMEF22A3QJZ6 481 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 GNAI3P08754 354 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 CPA1P15085 419 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 NUCB2P80303 420 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 KLHL40Q2TBA0 621 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 ZSCAN23Q3MJ62 389 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 TTC21AQ8NDW8 1320 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 SSH2Q76I76 1423 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 NRKQ7Z2Y5 1582 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 SRGAP3O43295 1099 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 MPNDQ8N594 471 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 RNF214Q8ND24 703 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 REREQ9P2R6 1566 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 PI4KAP2A4QPH2 592 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 PRIM1P49642 420 aaKnown RBP9.1□□□□□ -0.95
C11orf54-207ENST00000528288 PI4KAP1Q8N8J0 262 aa9.1□□□□□ -0.95
C11orf54-207ENST00000528288 RBSNQ9H1K0 784 aa9.09□□□□□ -0.95
C11orf54-207ENST00000528288 SOS1Q07889 1333 aaPredicted RBP9.09□□□□□ -0.95
C11orf54-207ENST00000528288 SYCE3A1L190 88 aa9.09□□□□□ -0.95
C11orf54-207ENST00000528288 CYP2E1P05181 493 aaPredicted RBP9.09□□□□□ -0.95
C11orf54-207ENST00000528288 ESCO1Q5FWF5 840 aa9.09□□□□□ -0.95
C11orf54-207ENST00000528288 OS9Q13438 667 aaPredicted RBP9.09□□□□□ -0.95
C11orf54-207ENST00000528288 SPG7Q9UQ90 795 aa9.09□□□□□ -0.95
C11orf54-207ENST00000528288 TBX22Q9Y458 520 aa9.09□□□□□ -0.95
C11orf54-207ENST00000528288 KDRP35968 1356 aa9.08□□□□□ -0.96
C11orf54-207ENST00000528288 MAP3K5Q99683 1374 aa9.08□□□□□ -0.96
C11orf54-207ENST00000528288 PA2G4Q9UQ80 394 aaKnown RBP9.08□□□□□ -0.96
C11orf54-207ENST00000528288 SALL3Q9BXA9 1300 aa9.08□□□□□ -0.96
C11orf54-207ENST00000528288 CWC27Q6UX04 472 aaKnown RBP9.08□□□□□ -0.96
C11orf54-207ENST00000528288 SRCIN1Q9C0H9 1055 aa9.08□□□□□ -0.96
C11orf54-207ENST00000528288 OSBPL3Q9H4L5 887 aa9.08□□□□□ -0.96
C11orf54-207ENST00000528288 TMEM63CQ9P1W3 806 aa9.08□□□□□ -0.96
C11orf54-207ENST00000528288 IBTKQ9P2D0 1353 aaPredicted RBP9.08□□□□□ -0.96
C11orf54-207ENST00000528288 CLCN1P35523 988 aa9.08□□□□□ -0.96
C11orf54-207ENST00000528288 AIMP1Q12904 312 aaKnown RBP9.08□□□□□ -0.96
C11orf54-207ENST00000528288 PROSER3Q2NL68 480 aa9.08□□□□□ -0.96
C11orf54-207ENST00000528288 PSME1Q06323 249 aa9.07□□□□□ -0.96
C11orf54-207ENST00000528288 THEMISQ8N1K5 641 aaPredicted RBP9.07□□□□□ -0.96
C11orf54-207ENST00000528288 JARID2Q92833 1246 aaPredicted RBP9.07□□□□□ -0.96
C11orf54-207ENST00000528288 ZNF530Q6P9A1 599 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms