RNA–Protein interactions for RNA: ENST00000527409.1

LMNB2-204, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-204ENST00000527409 ADAMTS7Q9UKP4 1686 aa30.16■■■□□ 2.42
LMNB2-204ENST00000527409 ATF5Q9Y2D1 282 aaPredicted RBP30.14■■■□□ 2.42
LMNB2-204ENST00000527409 MRC1P22897 1456 aa30.13■■■□□ 2.41
LMNB2-204ENST00000527409 PTGER2P43116 358 aa30.12■■■□□ 2.41
LMNB2-204ENST00000527409 NFATC2IPQ8NCF5 419 aa30.12■■■□□ 2.41
LMNB2-204ENST00000527409 COL24A1Q17RW2 1714 aa30.11■■■□□ 2.41
LMNB2-204ENST00000527409 ATP6V1AP38606 617 aa30.11■■■□□ 2.41
LMNB2-204ENST00000527409 GAS2L2Q8NHY3 880 aa30.11■■■□□ 2.41
LMNB2-204ENST00000527409 RSPH6AQ9H0K4 717 aa30.11■■■□□ 2.41
LMNB2-204ENST00000527409 UBR3Q6ZT12 1888 aa30.1■■■□□ 2.41
LMNB2-204ENST00000527409 RNMTO43148 476 aaKnown RBP30.1■■■□□ 2.41
LMNB2-204ENST00000527409 AK7Q96M32 723 aa30.1■■■□□ 2.41
LMNB2-204ENST00000527409 U2AF1L5P0DN76 240 aaPredicted RBP30.09■■■□□ 2.41
LMNB2-204ENST00000527409 U2AF1Q01081 240 aaKnown RBP eCLIP30.09■■■□□ 2.41
LMNB2-204ENST00000527409 RALBP1Q15311 655 aa30.09■■■□□ 2.41
LMNB2-204ENST00000527409 FLAD1Q8NFF5 587 aa30.09■■■□□ 2.41
LMNB2-204ENST00000527409 SLC52A2Q9HAB3 445 aa30.09■■■□□ 2.41
LMNB2-204ENST00000527409 PRKAR2BP31323 418 aa30.08■■■□□ 2.41
LMNB2-204ENST00000527409 SGIP1Q9BQI5 828 aa30.08■■■□□ 2.41
LMNB2-204ENST00000527409 LGR6Q9HBX8 967 aa30.08■■■□□ 2.41
LMNB2-204ENST00000527409 COL5A3P25940 1745 aaPredicted RBP30.08■■■□□ 2.41
LMNB2-204ENST00000527409 MAP3K5Q99683 1374 aa30.07■■■□□ 2.4
LMNB2-204ENST00000527409 ITPK1Q13572 414 aa30.07■■■□□ 2.4
LMNB2-204ENST00000527409 LINC00116Q8NCU8 138 aa30.07■■■□□ 2.4
LMNB2-204ENST00000527409 RBM42Q9BTD8 480 aaKnown RBP30.07■■■□□ 2.4
LMNB2-204ENST00000527409 FCHSD2O94868 740 aa30.06■■■□□ 2.4
LMNB2-204ENST00000527409 COL23A1Q86Y22 540 aaPredicted RBP30.06■■■□□ 2.4
LMNB2-204ENST00000527409 CICQ96RK0 1608 aaPredicted RBP30.06■■■□□ 2.4
LMNB2-204ENST00000527409 GNAT3A8MTJ3 354 aa30.04■■■□□ 2.4
LMNB2-204ENST00000527409 MSH5O43196 834 aa30.04■■■□□ 2.4
LMNB2-204ENST00000527409 SLC4A9Q96Q91 983 aa30.03■■■□□ 2.4
LMNB2-204ENST00000527409 PHACTR3Q96KR7 559 aa30.02■■■□□ 2.4
LMNB2-204ENST00000527409 SSFA2P28290 1259 aa30.01■■■□□ 2.39
LMNB2-204ENST00000527409 TJP1Q07157 1748 aa30■■■□□ 2.39
LMNB2-204ENST00000527409 PTCD1O75127 700 aaKnown RBP30■■■□□ 2.39
LMNB2-204ENST00000527409 POLD1P28340 1107 aa30■■■□□ 2.39
LMNB2-204ENST00000527409 ARXQ96QS3 562 aa30■■■□□ 2.39
LMNB2-204ENST00000527409 SIPA1L3O60292 1781 aaPredicted RBP29.99■■■□□ 2.39
LMNB2-204ENST00000527409 GNPATO15228 680 aa29.98■■■□□ 2.39
LMNB2-204ENST00000527409 CNTNAP4Q9C0A0 1308 aa29.97■■■□□ 2.39
LMNB2-204ENST00000527409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.97■■■□□ 2.39
LMNB2-204ENST00000527409 AMIGO3Q86WK7 504 aa29.97■■■□□ 2.39
LMNB2-204ENST00000527409 UBR2Q8IWV8 1755 aa29.97■■■□□ 2.39
LMNB2-204ENST00000527409 MYBBP1AQ9BQG0 1328 aaKnown RBP29.96■■■□□ 2.39
LMNB2-204ENST00000527409 PHF14O94880 888 aa29.96■■■□□ 2.39
LMNB2-204ENST00000527409 TEFQ10587 303 aa29.96■■■□□ 2.39
LMNB2-204ENST00000527409 RC3H1Q5TC82 1133 aaKnown RBP29.96■■■□□ 2.39
LMNB2-204ENST00000527409 IL17REQ8NFR9 667 aa29.96■■■□□ 2.39
LMNB2-204ENST00000527409 CEMIPQ8WUJ3 1361 aa29.95■■■□□ 2.39
LMNB2-204ENST00000527409 KCPQ6ZWJ8 1503 aa29.95■■■□□ 2.38
LMNB2-204ENST00000527409 MYH14Q7Z406 1995 aaKnown RBP29.94■■■□□ 2.38
LMNB2-204ENST00000527409 NEFMP07197 916 aa29.94■■■□□ 2.38
LMNB2-204ENST00000527409 FHDC1Q9C0D6 1143 aaPredicted RBP29.94■■■□□ 2.38
LMNB2-204ENST00000527409 RTCBQ9Y3I0 505 aaKnown RBP29.93■■■□□ 2.38
LMNB2-204ENST00000527409 SLC39A6Q13433 755 aa29.92■■■□□ 2.38
LMNB2-204ENST00000527409 PNNQ9H307 717 aaKnown RBP29.91■■■□□ 2.38
LMNB2-204ENST00000527409 MSL1Q68DK7 614 aa29.9■■■□□ 2.38
LMNB2-204ENST00000527409 SMIM5Q71RC9 77 aa29.9■■■□□ 2.38
LMNB2-204ENST00000527409 RTF1Q92541 710 aaKnown RBP29.9■■■□□ 2.38
LMNB2-204ENST00000527409 SYT17Q9BSW7 474 aa29.9■■■□□ 2.38
LMNB2-204ENST00000527409 ADRA2BP18089 450 aa29.89■■■□□ 2.38
LMNB2-204ENST00000527409 TTC5Q8N0Z6 440 aa29.89■■■□□ 2.38
LMNB2-204ENST00000527409 DLG5Q8TDM6 1919 aa29.88■■■□□ 2.37
LMNB2-204ENST00000527409 HTATSF1O43719 755 aaKnown RBP29.88■■■□□ 2.37
LMNB2-204ENST00000527409 RPS6KA4O75676 772 aa29.88■■■□□ 2.37
LMNB2-204ENST00000527409 CRKLP46109 303 aaKnown RBP29.88■■■□□ 2.37
LMNB2-204ENST00000527409 VSIG10Q8N0Z9 540 aa29.88■■■□□ 2.37
LMNB2-204ENST00000527409 TRAPPC3LQ5T215 181 aa29.87■■■□□ 2.37
LMNB2-204ENST00000527409 C4AP0C0L4 1744 aa29.86■■■□□ 2.37
LMNB2-204ENST00000527409 PLEKHF1Q96S99 279 aa29.86■■■□□ 2.37
LMNB2-204ENST00000527409 PRKRIP1Q9H875 184 aaPredicted RBP29.86■■■□□ 2.37
LMNB2-204ENST00000527409 DCAF8L1A6NGE4 600 aa29.85■■■□□ 2.37
LMNB2-204ENST00000527409 ZNF790Q6PG37 636 aa29.85■■■□□ 2.37
LMNB2-204ENST00000527409 DNAJC10Q8IXB1 793 aa29.85■■■□□ 2.37
LMNB2-204ENST00000527409 MAPK8IP3Q9UPT6 1336 aa29.84■■■□□ 2.37
LMNB2-204ENST00000527409 MCM10Q7L590 875 aa29.82■■■□□ 2.36
LMNB2-204ENST00000527409 CCDC87Q9NVE4 849 aa29.82■■■□□ 2.36
LMNB2-204ENST00000527409 ZNF316A6NFI3 1004 aaPredicted RBP29.81■■■□□ 2.36
LMNB2-204ENST00000527409 BTBD11A6QL63 1104 aa29.81■■■□□ 2.36
LMNB2-204ENST00000527409 CYP19A1P11511 503 aaPredicted RBP29.81■■■□□ 2.36
LMNB2-204ENST00000527409 KLHL34Q8N239 644 aa29.81■■■□□ 2.36
LMNB2-204ENST00000527409 ARHGEF1Q92888 912 aaKnown RBP29.81■■■□□ 2.36
LMNB2-204ENST00000527409 RFC4P35249 363 aa29.8■■■□□ 2.36
LMNB2-204ENST00000527409 INTS5Q6P9B9 1019 aaKnown RBP29.8■■■□□ 2.36
LMNB2-204ENST00000527409 HEG1Q9ULI3 1381 aa29.79■■■□□ 2.36
LMNB2-204ENST00000527409 NFE2L2Q16236 605 aa29.79■■■□□ 2.36
LMNB2-204ENST00000527409 ZNF496Q96IT1 587 aaPredicted RBP29.79■■■□□ 2.36
LMNB2-204ENST00000527409 FMNL2Q96PY5 1086 aa29.78■■■□□ 2.36
LMNB2-204ENST00000527409 DCTN1Q14203 1278 aa29.77■■■□□ 2.36
LMNB2-204ENST00000527409 TEX13AQ9BXU3 409 aaPredicted RBP29.77■■■□□ 2.36
LMNB2-204ENST00000527409 STARD3NLO95772 234 aa29.76■■■□□ 2.35
LMNB2-204ENST00000527409 NLGN1Q8N2Q7 840 aa29.76■■■□□ 2.35
LMNB2-204ENST00000527409 WDR43Q15061 677 aaKnown RBP eCLIP29.75■■■□□ 2.35
LMNB2-204ENST00000527409 SOS1Q07889 1333 aaPredicted RBP29.74■■■□□ 2.35
LMNB2-204ENST00000527409 GYS1P13807 737 aa29.73■■■□□ 2.35
LMNB2-204ENST00000527409 CD2APQ9Y5K6 639 aa29.73■■■□□ 2.35
LMNB2-204ENST00000527409 USP42Q9H9J4 1324 aaKnown RBP29.72■■■□□ 2.35
LMNB2-204ENST00000527409 TAF7Q15545 349 aaPredicted RBP29.72■■■□□ 2.35
LMNB2-204ENST00000527409 ZBTB1Q9Y2K1 713 aa29.72■■■□□ 2.35
LMNB2-204ENST00000527409 MMP10P09238 476 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms