RNA–Protein interactions for RNA: ENST00000527142.5

SYVN1-208, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-208ENST00000527142 ATG3Q9NT62 314 aa14.38□□□□□ -0.11
SYVN1-208ENST00000527142 SLC16A10Q8TF71 515 aa14.37□□□□□ -0.11
SYVN1-208ENST00000527142 PDGFDQ9GZP0 370 aaPredicted RBP14.37□□□□□ -0.11
SYVN1-208ENST00000527142 SLC52A2Q9HAB3 445 aa14.37□□□□□ -0.11
SYVN1-208ENST00000527142 C4BP0C0L5 1744 aa14.37□□□□□ -0.11
SYVN1-208ENST00000527142 PNPLA7Q6ZV29 1317 aa14.37□□□□□ -0.11
SYVN1-208ENST00000527142 MYBBP1AQ9BQG0 1328 aaKnown RBP14.37□□□□□ -0.11
SYVN1-208ENST00000527142 ZBTB7AO95365 584 aa14.36□□□□□ -0.11
SYVN1-208ENST00000527142 TAF1LQ8IZX4 1826 aa14.36□□□□□ -0.11
SYVN1-208ENST00000527142 CICQ96RK0 1608 aaPredicted RBP14.35□□□□□ -0.11
SYVN1-208ENST00000527142 GNAT3A8MTJ3 354 aa14.35□□□□□ -0.11
SYVN1-208ENST00000527142 RNMTO43148 476 aaKnown RBP14.35□□□□□ -0.11
SYVN1-208ENST00000527142 NFATC2IPQ8NCF5 419 aa14.35□□□□□ -0.11
SYVN1-208ENST00000527142 FLAD1Q8NFF5 587 aa14.35□□□□□ -0.11
SYVN1-208ENST00000527142 AK7Q96M32 723 aa14.35□□□□□ -0.11
SYVN1-208ENST00000527142 TUBGCP6Q96RT7 1819 aa14.34□□□□□ -0.11
SYVN1-208ENST00000527142 PTGER2P43116 358 aa14.34□□□□□ -0.11
SYVN1-208ENST00000527142 PHACTR3Q96KR7 559 aa14.34□□□□□ -0.11
SYVN1-208ENST00000527142 CEMIPQ8WUJ3 1361 aa14.34□□□□□ -0.11
SYVN1-208ENST00000527142 YY1P25490 414 aa14.33□□□□□ -0.12
SYVN1-208ENST00000527142 ATP6V1AP38606 617 aa14.33□□□□□ -0.12
SYVN1-208ENST00000527142 ITPK1Q13572 414 aa14.33□□□□□ -0.12
SYVN1-208ENST00000527142 LINC00116Q8NCU8 138 aa14.33□□□□□ -0.12
SYVN1-208ENST00000527142 LGR6Q9HBX8 967 aa14.33□□□□□ -0.12
SYVN1-208ENST00000527142 PPP1R1BQ9UD71 204 aaPredicted RBP14.33□□□□□ -0.12
SYVN1-208ENST00000527142 SSFA2P28290 1259 aa14.32□□□□□ -0.12
SYVN1-208ENST00000527142 SGIP1Q9BQI5 828 aa14.32□□□□□ -0.12
SYVN1-208ENST00000527142 RBM42Q9BTD8 480 aaKnown RBP14.32□□□□□ -0.12
SYVN1-208ENST00000527142 PNNQ9H307 717 aaKnown RBP14.32□□□□□ -0.12
SYVN1-208ENST00000527142 CNTNAP4Q9C0A0 1308 aa14.32□□□□□ -0.12
SYVN1-208ENST00000527142 NEFMP07197 916 aa14.31□□□□□ -0.12
SYVN1-208ENST00000527142 TEFQ10587 303 aa14.31□□□□□ -0.12
SYVN1-208ENST00000527142 IFFO2Q5TF58 517 aa14.31□□□□□ -0.12
SYVN1-208ENST00000527142 SLC4A9Q96Q91 983 aa14.31□□□□□ -0.12
SYVN1-208ENST00000527142 PRKRIP1Q9H875 184 aaPredicted RBP14.31□□□□□ -0.12
SYVN1-208ENST00000527142 ATF5Q9Y2D1 282 aaPredicted RBP14.31□□□□□ -0.12
SYVN1-208ENST00000527142 KCPQ6ZWJ8 1503 aa14.31□□□□□ -0.12
SYVN1-208ENST00000527142 COL5A3P25940 1745 aaPredicted RBP14.3□□□□□ -0.12
SYVN1-208ENST00000527142 COL24A1Q17RW2 1714 aa14.3□□□□□ -0.12
SYVN1-208ENST00000527142 UBR3Q6ZT12 1888 aa14.3□□□□□ -0.12
SYVN1-208ENST00000527142 ZNF316A6NFI3 1004 aaPredicted RBP14.3□□□□□ -0.12
SYVN1-208ENST00000527142 PTCD1O75127 700 aaKnown RBP14.3□□□□□ -0.12
SYVN1-208ENST00000527142 RC3H1Q5TC82 1133 aaKnown RBP14.3□□□□□ -0.12
SYVN1-208ENST00000527142 IL17REQ8NFR9 667 aa14.3□□□□□ -0.12
SYVN1-208ENST00000527142 GNPATO15228 680 aa14.29□□□□□ -0.12
SYVN1-208ENST00000527142 HTATSF1O43719 755 aaKnown RBP14.29□□□□□ -0.12
SYVN1-208ENST00000527142 POLD1P28340 1107 aa14.29□□□□□ -0.12
SYVN1-208ENST00000527142 COL23A1Q86Y22 540 aaPredicted RBP14.29□□□□□ -0.12
SYVN1-208ENST00000527142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.28□□□□□ -0.12
SYVN1-208ENST00000527142 MSH5O43196 834 aa14.28□□□□□ -0.12
SYVN1-208ENST00000527142 ADRA2BP18089 450 aa14.28□□□□□ -0.12
SYVN1-208ENST00000527142 UBR2Q8IWV8 1755 aa14.28□□□□□ -0.12
SYVN1-208ENST00000527142 VSIG10Q8N0Z9 540 aa14.28□□□□□ -0.12
SYVN1-208ENST00000527142 RTF1Q92541 710 aaKnown RBP14.28□□□□□ -0.12
SYVN1-208ENST00000527142 PLEKHF1Q96S99 279 aa14.28□□□□□ -0.12
SYVN1-208ENST00000527142 MAPK8IP3Q9UPT6 1336 aa14.28□□□□□ -0.12
SYVN1-208ENST00000527142 VIRMAQ69YN4 1812 aaKnown RBP14.27□□□□□ -0.12
SYVN1-208ENST00000527142 SIPA1L3O60292 1781 aaPredicted RBP14.27□□□□□ -0.12
SYVN1-208ENST00000527142 TJP1Q07157 1748 aa14.27□□□□□ -0.12
SYVN1-208ENST00000527142 AMIGO3Q86WK7 504 aa14.27□□□□□ -0.13
SYVN1-208ENST00000527142 TTC5Q8N0Z6 440 aa14.27□□□□□ -0.13
SYVN1-208ENST00000527142 ARXQ96QS3 562 aa14.27□□□□□ -0.13
SYVN1-208ENST00000527142 NFE2L2Q16236 605 aa14.26□□□□□ -0.13
SYVN1-208ENST00000527142 RTCBQ9Y3I0 505 aaKnown RBP14.26□□□□□ -0.13
SYVN1-208ENST00000527142 PHF14O94880 888 aa14.25□□□□□ -0.13
SYVN1-208ENST00000527142 CRKLP46109 303 aaKnown RBP14.25□□□□□ -0.13
SYVN1-208ENST00000527142 SLC39A6Q13433 755 aa14.25□□□□□ -0.13
SYVN1-208ENST00000527142 ZNF790Q6PG37 636 aa14.25□□□□□ -0.13
SYVN1-208ENST00000527142 RPS6KA4O75676 772 aa14.24□□□□□ -0.13
SYVN1-208ENST00000527142 WDR43Q15061 677 aaKnown RBP eCLIP14.24□□□□□ -0.13
SYVN1-208ENST00000527142 TRAPPC3LQ5T215 181 aa14.23□□□□□ -0.13
SYVN1-208ENST00000527142 MCM10Q7L590 875 aa14.23□□□□□ -0.13
SYVN1-208ENST00000527142 DNAJC10Q8IXB1 793 aa14.23□□□□□ -0.13
SYVN1-208ENST00000527142 FMNL2Q96PY5 1086 aa14.23□□□□□ -0.13
SYVN1-208ENST00000527142 FHDC1Q9C0D6 1143 aaPredicted RBP14.23□□□□□ -0.13
SYVN1-208ENST00000527142 CCDC87Q9NVE4 849 aa14.23□□□□□ -0.13
SYVN1-208ENST00000527142 HEG1Q9ULI3 1381 aa14.22□□□□□ -0.13
SYVN1-208ENST00000527142 BTBD11A6QL63 1104 aa14.22□□□□□ -0.13
SYVN1-208ENST00000527142 CYP19A1P11511 503 aaPredicted RBP14.22□□□□□ -0.13
SYVN1-208ENST00000527142 MSL1Q68DK7 614 aa14.22□□□□□ -0.13
SYVN1-208ENST00000527142 ZNF496Q96IT1 587 aaPredicted RBP14.22□□□□□ -0.13
SYVN1-208ENST00000527142 TEX13AQ9BXU3 409 aaPredicted RBP14.22□□□□□ -0.13
SYVN1-208ENST00000527142 STARD3NLO95772 234 aa14.21□□□□□ -0.13
SYVN1-208ENST00000527142 LMOD3Q0VAK6 560 aa14.21□□□□□ -0.13
SYVN1-208ENST00000527142 INTS5Q6P9B9 1019 aaKnown RBP14.21□□□□□ -0.13
SYVN1-208ENST00000527142 MYH14Q7Z406 1995 aaKnown RBP14.21□□□□□ -0.13
SYVN1-208ENST00000527142 SOS1Q07889 1333 aaPredicted RBP14.2□□□□□ -0.14
SYVN1-208ENST00000527142 RFC4P35249 363 aa14.2□□□□□ -0.14
SYVN1-208ENST00000527142 SMIM5Q71RC9 77 aa14.2□□□□□ -0.14
SYVN1-208ENST00000527142 PNISRQ8TF01 805 aaKnown RBP14.2□□□□□ -0.14
SYVN1-208ENST00000527142 ARHGEF1Q92888 912 aaKnown RBP14.2□□□□□ -0.14
SYVN1-208ENST00000527142 SYT17Q9BSW7 474 aa14.2□□□□□ -0.14
SYVN1-208ENST00000527142 C4AP0C0L4 1744 aa14.19□□□□□ -0.14
SYVN1-208ENST00000527142 DCTN1Q14203 1278 aa14.19□□□□□ -0.14
SYVN1-208ENST00000527142 TAF7Q15545 349 aaPredicted RBP14.19□□□□□ -0.14
SYVN1-208ENST00000527142 NLGN1Q8N2Q7 840 aa14.19□□□□□ -0.14
SYVN1-208ENST00000527142 USP42Q9H9J4 1324 aaKnown RBP14.18□□□□□ -0.14
SYVN1-208ENST00000527142 RUNDC1Q96C34 613 aa14.18□□□□□ -0.14
SYVN1-208ENST00000527142 ADAMTS8Q9UP79 889 aa14.18□□□□□ -0.14
SYVN1-208ENST00000527142 COL15A1P39059 1388 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms