RNA–Protein interactions for RNA: ENST00000526463.5

CCDC84-203, Transcript of coiled-coil domain containing 84, humanhuman

TSL 1 (best)

Gene CCDC84, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-203ENST00000526463 MTFR1LQ9H019 292 aa27.73■■■□□ 2.03
CCDC84-203ENST00000526463 UBR3Q6ZT12 1888 aa27.72■■■□□ 2.03
CCDC84-203ENST00000526463 U2AF1L5P0DN76 240 aaPredicted RBP27.72■■■□□ 2.03
CCDC84-203ENST00000526463 U2AF1Q01081 240 aaKnown RBP eCLIP27.72■■■□□ 2.03
CCDC84-203ENST00000526463 RSPH6AQ9H0K4 717 aa27.72■■■□□ 2.03
CCDC84-203ENST00000526463 GAS2L2Q8NHY3 880 aa27.71■■■□□ 2.03
CCDC84-203ENST00000526463 PRKAR2BP31323 418 aa27.7■■■□□ 2.02
CCDC84-203ENST00000526463 NFATC2IPQ8NCF5 419 aa27.7■■■□□ 2.02
CCDC84-203ENST00000526463 PPP1R1BQ9UD71 204 aaPredicted RBP27.7■■■□□ 2.02
CCDC84-203ENST00000526463 RNMTO43148 476 aaKnown RBP27.69■■■□□ 2.02
CCDC84-203ENST00000526463 ATF5Q9Y2D1 282 aaPredicted RBP27.69■■■□□ 2.02
CCDC84-203ENST00000526463 COL5A3P25940 1745 aaPredicted RBP27.69■■■□□ 2.02
CCDC84-203ENST00000526463 COL24A1Q17RW2 1714 aa27.68■■■□□ 2.02
CCDC84-203ENST00000526463 ATP6V1AP38606 617 aa27.68■■■□□ 2.02
CCDC84-203ENST00000526463 SLC16A10Q8TF71 515 aa27.68■■■□□ 2.02
CCDC84-203ENST00000526463 SLC52A2Q9HAB3 445 aa27.68■■■□□ 2.02
CCDC84-203ENST00000526463 LGR6Q9HBX8 967 aa27.68■■■□□ 2.02
CCDC84-203ENST00000526463 MAP3K5Q99683 1374 aa27.68■■■□□ 2.02
CCDC84-203ENST00000526463 FCHSD2O94868 740 aa27.67■■■□□ 2.02
CCDC84-203ENST00000526463 AK7Q96M32 723 aa27.67■■■□□ 2.02
CCDC84-203ENST00000526463 PTGER2P43116 358 aa27.66■■■□□ 2.02
CCDC84-203ENST00000526463 RBM42Q9BTD8 480 aaKnown RBP27.66■■■□□ 2.02
CCDC84-203ENST00000526463 ITPK1Q13572 414 aa27.65■■■□□ 2.02
CCDC84-203ENST00000526463 LINC00116Q8NCU8 138 aa27.65■■■□□ 2.02
CCDC84-203ENST00000526463 CICQ96RK0 1608 aaPredicted RBP27.64■■■□□ 2.02
CCDC84-203ENST00000526463 SIPA1L3O60292 1781 aaPredicted RBP27.64■■■□□ 2.02
CCDC84-203ENST00000526463 GNAT3A8MTJ3 354 aa27.64■■■□□ 2.02
CCDC84-203ENST00000526463 FLAD1Q8NFF5 587 aa27.64■■■□□ 2.02
CCDC84-203ENST00000526463 PHACTR3Q96KR7 559 aa27.64■■■□□ 2.02
CCDC84-203ENST00000526463 MSH5O43196 834 aa27.62■■■□□ 2.01
CCDC84-203ENST00000526463 COL23A1Q86Y22 540 aaPredicted RBP27.62■■■□□ 2.01
CCDC84-203ENST00000526463 SGIP1Q9BQI5 828 aa27.62■■■□□ 2.01
CCDC84-203ENST00000526463 MYBBP1AQ9BQG0 1328 aaKnown RBP27.62■■■□□ 2.01
CCDC84-203ENST00000526463 TJP1Q07157 1748 aa27.61■■■□□ 2.01
CCDC84-203ENST00000526463 SLC4A9Q96Q91 983 aa27.61■■■□□ 2.01
CCDC84-203ENST00000526463 UBR2Q8IWV8 1755 aa27.6■■■□□ 2.01
CCDC84-203ENST00000526463 PTCD1O75127 700 aaKnown RBP27.6■■■□□ 2.01
CCDC84-203ENST00000526463 DLG5Q8TDM6 1919 aa27.6■■■□□ 2.01
CCDC84-203ENST00000526463 MYH14Q7Z406 1995 aaKnown RBP27.6■■■□□ 2.01
CCDC84-203ENST00000526463 NEFMP07197 916 aa27.57■■■□□ 2
CCDC84-203ENST00000526463 SSFA2P28290 1259 aa27.57■■■□□ 2
CCDC84-203ENST00000526463 TEFQ10587 303 aa27.57■■■□□ 2
CCDC84-203ENST00000526463 IL17REQ8NFR9 667 aa27.57■■■□□ 2
CCDC84-203ENST00000526463 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.56■■■□□ 2
CCDC84-203ENST00000526463 GNPATO15228 680 aa27.56■■■□□ 2
CCDC84-203ENST00000526463 POLD1P28340 1107 aa27.56■■■□□ 2
CCDC84-203ENST00000526463 PHF14O94880 888 aa27.55■■■□□ 2
CCDC84-203ENST00000526463 AMIGO3Q86WK7 504 aa27.55■■■□□ 2
CCDC84-203ENST00000526463 ARXQ96QS3 562 aa27.55■■■□□ 2
CCDC84-203ENST00000526463 CNTNAP4Q9C0A0 1308 aa27.55■■■□□ 2
CCDC84-203ENST00000526463 CEMIPQ8WUJ3 1361 aa27.55■■■□□ 2
CCDC84-203ENST00000526463 KCPQ6ZWJ8 1503 aa27.55■■■□□ 2
CCDC84-203ENST00000526463 SLC39A6Q13433 755 aa27.54■■■□□ 2
CCDC84-203ENST00000526463 RC3H1Q5TC82 1133 aaKnown RBP27.54■■■□□ 2
CCDC84-203ENST00000526463 PNNQ9H307 717 aaKnown RBP27.53■■■□□ 2
CCDC84-203ENST00000526463 PRKRIP1Q9H875 184 aaPredicted RBP27.53■■■□□ 2
CCDC84-203ENST00000526463 RTF1Q92541 710 aaKnown RBP27.52■■■□□ 2
CCDC84-203ENST00000526463 ZNF316A6NFI3 1004 aaPredicted RBP27.51■■□□□ 1.99
CCDC84-203ENST00000526463 RTCBQ9Y3I0 505 aaKnown RBP27.51■■□□□ 1.99
CCDC84-203ENST00000526463 SMIM5Q71RC9 77 aa27.5■■□□□ 1.99
CCDC84-203ENST00000526463 TTC5Q8N0Z6 440 aa27.5■■□□□ 1.99
CCDC84-203ENST00000526463 PLEKHF1Q96S99 279 aa27.5■■□□□ 1.99
CCDC84-203ENST00000526463 C4AP0C0L4 1744 aa27.5■■□□□ 1.99
CCDC84-203ENST00000526463 HTATSF1O43719 755 aaKnown RBP27.49■■□□□ 1.99
CCDC84-203ENST00000526463 MSL1Q68DK7 614 aa27.49■■□□□ 1.99
CCDC84-203ENST00000526463 FHDC1Q9C0D6 1143 aaPredicted RBP27.49■■□□□ 1.99
CCDC84-203ENST00000526463 MAPK8IP3Q9UPT6 1336 aa27.48■■□□□ 1.99
CCDC84-203ENST00000526463 ADRA2BP18089 450 aa27.47■■□□□ 1.99
CCDC84-203ENST00000526463 CRKLP46109 303 aaKnown RBP27.47■■□□□ 1.99
CCDC84-203ENST00000526463 DNAJC10Q8IXB1 793 aa27.47■■□□□ 1.99
CCDC84-203ENST00000526463 RPS6KA4O75676 772 aa27.46■■□□□ 1.99
CCDC84-203ENST00000526463 TRAPPC3LQ5T215 181 aa27.46■■□□□ 1.99
CCDC84-203ENST00000526463 ZNF790Q6PG37 636 aa27.46■■□□□ 1.99
CCDC84-203ENST00000526463 MCM10Q7L590 875 aa27.46■■□□□ 1.99
CCDC84-203ENST00000526463 VSIG10Q8N0Z9 540 aa27.46■■□□□ 1.99
CCDC84-203ENST00000526463 SYT17Q9BSW7 474 aa27.45■■□□□ 1.98
CCDC84-203ENST00000526463 NFE2L2Q16236 605 aa27.44■■□□□ 1.98
CCDC84-203ENST00000526463 BTBD11A6QL63 1104 aa27.43■■□□□ 1.98
CCDC84-203ENST00000526463 DCTN1Q14203 1278 aa27.42■■□□□ 1.98
CCDC84-203ENST00000526463 CCDC87Q9NVE4 849 aa27.42■■□□□ 1.98
CCDC84-203ENST00000526463 HEG1Q9ULI3 1381 aa27.41■■□□□ 1.98
CCDC84-203ENST00000526463 CYP19A1P11511 503 aaPredicted RBP27.41■■□□□ 1.98
CCDC84-203ENST00000526463 WDR43Q15061 677 aaKnown RBP eCLIP27.41■■□□□ 1.98
CCDC84-203ENST00000526463 KLHL34Q8N239 644 aa27.41■■□□□ 1.98
CCDC84-203ENST00000526463 ARHGEF1Q92888 912 aaKnown RBP27.41■■□□□ 1.98
CCDC84-203ENST00000526463 ZNF496Q96IT1 587 aaPredicted RBP27.41■■□□□ 1.98
CCDC84-203ENST00000526463 RFC4P35249 363 aa27.4■■□□□ 1.98
CCDC84-203ENST00000526463 INTS5Q6P9B9 1019 aaKnown RBP27.4■■□□□ 1.98
CCDC84-203ENST00000526463 DCAF8L1A6NGE4 600 aa27.39■■□□□ 1.98
CCDC84-203ENST00000526463 FMNL2Q96PY5 1086 aa27.39■■□□□ 1.98
CCDC84-203ENST00000526463 KDM3BQ7LBC6 1761 aa27.37■■□□□ 1.97
CCDC84-203ENST00000526463 STARD3NLO95772 234 aa27.37■■□□□ 1.97
CCDC84-203ENST00000526463 TEX13AQ9BXU3 409 aaPredicted RBP27.37■■□□□ 1.97
CCDC84-203ENST00000526463 KCNQ3O43525 872 aa27.35■■□□□ 1.97
CCDC84-203ENST00000526463 TAF7Q15545 349 aaPredicted RBP27.35■■□□□ 1.97
CCDC84-203ENST00000526463 SOS1Q07889 1333 aaPredicted RBP27.35■■□□□ 1.97
CCDC84-203ENST00000526463 NLGN1Q8N2Q7 840 aa27.34■■□□□ 1.97
CCDC84-203ENST00000526463 ZBTB1Q9Y2K1 713 aa27.34■■□□□ 1.97
CCDC84-203ENST00000526463 USP42Q9H9J4 1324 aaKnown RBP27.33■■□□□ 1.97
CCDC84-203ENST00000526463 GYS1P13807 737 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms