RNA–Protein interactions for RNA: ENST00000526463.5

CCDC84-203, Transcript of coiled-coil domain containing 84, humanhuman

TSL 1 (best)

Gene CCDC84, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-203ENST00000526463 NISCHQ9Y2I1 1504 aa50.73■■■■■ 5.71
CCDC84-203ENST00000526463 CCDC180Q9P1Z9 1646 aa45.3■■■■■ 4.84
CCDC84-203ENST00000526463 ABCC9O60706 1549 aa44.39■■■■■ 4.7
CCDC84-203ENST00000526463 RB1CC1Q8TDY2 1594 aa42.68■■■■■ 4.42
CCDC84-203ENST00000526463 NACADO15069 1562 aa42.57■■■■■ 4.41
CCDC84-203ENST00000526463 DCAF8L2P0C7V8 631 aa42.39■■■■■ 4.38
CCDC84-203ENST00000526463 MYO15BQ96JP2 1530 aa42.24■■■■■ 4.35
CCDC84-203ENST00000526463 ZCCHC6Q5VYS8 1495 aaKnown RBP42.23■■■■■ 4.35
CCDC84-203ENST00000526463 DCAF1Q9Y4B6 1507 aa41.99■■■■■ 4.31
CCDC84-203ENST00000526463 UNC13AQ9UPW8 1703 aa41.79■■■■■ 4.28
CCDC84-203ENST00000526463 PABPN1Q86U42 306 aaKnown RBP eCLIP41.38■■■■■ 4.21
CCDC84-203ENST00000526463 BICRAQ9NZM4 1560 aa41.37■■■■■ 4.21
CCDC84-203ENST00000526463 SCRIBQ14160 1630 aa41.25■■■■■ 4.19
CCDC84-203ENST00000526463 SHROOM4Q9ULL8 1493 aa40.95■■■■■ 4.15
CCDC84-203ENST00000526463 DNAJC5BQ9UF47 199 aa40.83■■■■■ 4.13
CCDC84-203ENST00000526463 EIF4G1Q04637 1599 aaKnown RBP40.3■■■■■ 4.04
CCDC84-203ENST00000526463 CC2D2AQ9P2K1 1620 aa40.2■■■■■ 4.03
CCDC84-203ENST00000526463 CECR2Q9BXF3 1484 aa39.91■■■■□ 3.98
CCDC84-203ENST00000526463 SMARCA4P51532 1647 aa39.45■■■■□ 3.91
CCDC84-203ENST00000526463 BAZ1AQ9NRL2 1556 aaPredicted RBP39.37■■■■□ 3.89
CCDC84-203ENST00000526463 NCAPD3P42695 1498 aa39.24■■■■□ 3.87
CCDC84-203ENST00000526463 ATAD2BQ9ULI0 1458 aa39.23■■■■□ 3.87
CCDC84-203ENST00000526463 SMARCA2P51531 1590 aa39.22■■■■□ 3.87
CCDC84-203ENST00000526463 HMGXB3Q12766 1538 aa39.08■■■■□ 3.85
CCDC84-203ENST00000526463 MROH2BQ7Z745 1585 aa39.08■■■■□ 3.85
CCDC84-203ENST00000526463 PEG3Q9GZU2 1588 aa39.06■■■■□ 3.84
CCDC84-203ENST00000526463 BAZ1BQ9UIG0 1483 aaKnown RBP38.92■■■■□ 3.82
CCDC84-203ENST00000526463 WIZO95785 1651 aa38.7■■■■□ 3.79
CCDC84-203ENST00000526463 RSF1Q96T23 1441 aaPredicted RBP38.54■■■■□ 3.76
CCDC84-203ENST00000526463 NESP48681 1621 aa38.35■■■■□ 3.73
CCDC84-203ENST00000526463 ERCC6Q03468 1493 aa38.3■■■■□ 3.72
CCDC84-203ENST00000526463 LAMC3Q9Y6N6 1575 aa38.29■■■■□ 3.72
CCDC84-203ENST00000526463 TOP2AP11388 1531 aaKnown RBP38.27■■■■□ 3.72
CCDC84-203ENST00000526463 CADPSQ9ULU8 1353 aa38.06■■■■□ 3.68
CCDC84-203ENST00000526463 KIF21AQ7Z4S6 1674 aa37.99■■■■□ 3.67
CCDC84-203ENST00000526463 PDS5BQ9NTI5 1447 aa37.99■■■■□ 3.67
CCDC84-203ENST00000526463 CUX2O14529 1486 aa37.97■■■■□ 3.67
CCDC84-203ENST00000526463 THOC2Q8NI27 1593 aaKnown RBP37.89■■■■□ 3.66
CCDC84-203ENST00000526463 CFTRP13569 1480 aa37.82■■■■□ 3.64
CCDC84-203ENST00000526463 CCDC88BA6NC98 1476 aa37.77■■■■□ 3.64
CCDC84-203ENST00000526463 PRDM2Q13029 1718 aa37.69■■■■□ 3.62
CCDC84-203ENST00000526463 FANCD2Q9BXW9 1451 aa37.65■■■■□ 3.62
CCDC84-203ENST00000526463 CEP164Q9UPV0 1460 aa37.65■■■■□ 3.62
CCDC84-203ENST00000526463 MRC2Q9UBG0 1479 aa37.64■■■■□ 3.62
CCDC84-203ENST00000526463 WDR62O43379 1518 aa37.53■■■■□ 3.6
CCDC84-203ENST00000526463 SUPT5HO00267 1087 aaKnown RBP37.38■■■■□ 3.57
CCDC84-203ENST00000526463 URB2Q14146 1524 aaKnown RBP37.29■■■■□ 3.56
CCDC84-203ENST00000526463 ABCC8Q09428 1581 aa37.04■■■■□ 3.52
CCDC84-203ENST00000526463 TOPBP1Q92547 1522 aa37.04■■■■□ 3.52
CCDC84-203ENST00000526463 DNMBPQ6XZF7 1577 aa37.01■■■■□ 3.52
CCDC84-203ENST00000526463 DNAJC5Q9H3Z4 198 aa36.97■■■■□ 3.51
CCDC84-203ENST00000526463 IFT140Q96RY7 1462 aa36.86■■■■□ 3.49
CCDC84-203ENST00000526463 POLA1P09884 1462 aaPredicted RBP36.71■■■■□ 3.47
CCDC84-203ENST00000526463 CUX1P39880 1505 aa36.69■■■■□ 3.46
CCDC84-203ENST00000526463 TARBP1Q13395 1621 aaKnown RBP36.68■■■■□ 3.46
CCDC84-203ENST00000526463 ZNF608Q9ULD9 1512 aaPredicted RBP36.68■■■■□ 3.46
CCDC84-203ENST00000526463 EIF4G3O43432 1585 aaKnown RBP36.61■■■■□ 3.45
CCDC84-203ENST00000526463 FGD5Q6ZNL6 1462 aa36.6■■■■□ 3.45
CCDC84-203ENST00000526463 SOGA1O94964 1423 aa36.52■■■■□ 3.44
CCDC84-203ENST00000526463 RAD54L2Q9Y4B4 1467 aa36.52■■■■□ 3.44
CCDC84-203ENST00000526463 AQRO60306 1485 aaKnown RBP eCLIP36.43■■■■□ 3.424e-7■■■■■ 35.5
CCDC84-203ENST00000526463 WDR97A6NE52 1622 aa36.42■■■■□ 3.42
CCDC84-203ENST00000526463 BIVM-ERCC5R4GMW8 1640 aa36.38■■■■□ 3.41
CCDC84-203ENST00000526463 WRNQ14191 1432 aaPredicted RBP eCLIP36.37■■■■□ 3.41
CCDC84-203ENST00000526463 TOP2BQ02880 1626 aa36.35■■■■□ 3.41
CCDC84-203ENST00000526463 TDRD9Q8NDG6 1382 aaKnown RBP36.33■■■■□ 3.41
CCDC84-203ENST00000526463 SYNJ1O43426 1573 aa36.32■■■■□ 3.4
CCDC84-203ENST00000526463 OSCARQ8IYS5 282 aa36.31■■■■□ 3.4
CCDC84-203ENST00000526463 ABCA10Q8WWZ4 1543 aa36.24■■■■□ 3.39
CCDC84-203ENST00000526463 CHD1O14646 1710 aa36.22■■■■□ 3.39
CCDC84-203ENST00000526463 PBRM1Q86U86 1689 aa36.16■■■■□ 3.38
CCDC84-203ENST00000526463 GRIN2BQ13224 1484 aa36.16■■■■□ 3.38
CCDC84-203ENST00000526463 ABCA5Q8WWZ7 1642 aa36.15■■■■□ 3.38
CCDC84-203ENST00000526463 GAPVD1Q14C86 1478 aa36.13■■■■□ 3.37
CCDC84-203ENST00000526463 SNAPC4Q5SXM2 1469 aa36.13■■■■□ 3.37
CCDC84-203ENST00000526463 MAGI1Q96QZ7 1491 aaPredicted RBP36.1■■■■□ 3.37
CCDC84-203ENST00000526463 FBLN2P98095 1184 aa36.03■■■■□ 3.36
CCDC84-203ENST00000526463 SYNJ2O15056 1496 aa35.95■■■■□ 3.35
CCDC84-203ENST00000526463 CHMP7Q8WUX9 453 aaPredicted RBP35.91■■■■□ 3.34
CCDC84-203ENST00000526463 RIMBP3CA6NJZ7 1639 aa35.83■■■■□ 3.33
CCDC84-203ENST00000526463 RIMBP3BA6NNM3 1639 aa35.83■■■■□ 3.33
CCDC84-203ENST00000526463 RIMBP3Q9UFD9 1639 aa35.83■■■■□ 3.33
CCDC84-203ENST00000526463 ADAMTS12P58397 1594 aa35.82■■■■□ 3.32
CCDC84-203ENST00000526463 ERICH3Q5RHP9 1530 aa35.82■■■■□ 3.32
CCDC84-203ENST00000526463 ARHGEF11O15085 1522 aa35.78■■■■□ 3.32
CCDC84-203ENST00000526463 CLASP1Q7Z460 1538 aa35.76■■■■□ 3.31
CCDC84-203ENST00000526463 FHAD1B1AJZ9 1412 aa35.7■■■■□ 3.31
CCDC84-203ENST00000526463 GRIN2AQ12879 1464 aa35.69■■■■□ 3.3
CCDC84-203ENST00000526463 TRIM41Q8WV44 630 aa35.68■■■■□ 3.3
CCDC84-203ENST00000526463 KIF27Q86VH2 1401 aa35.63■■■■□ 3.29
CCDC84-203ENST00000526463 CEP170Q5SW79 1584 aa35.54■■■■□ 3.28
CCDC84-203ENST00000526463 NUP160Q12769 1436 aa35.53■■■■□ 3.28
CCDC84-203ENST00000526463 CUL7Q14999 1698 aa35.5■■■■□ 3.27
CCDC84-203ENST00000526463 ARAP1Q96P48 1450 aa35.47■■■■□ 3.27
CCDC84-203ENST00000526463 IGF1RP08069 1367 aa35.46■■■■□ 3.27
CCDC84-203ENST00000526463 CYB5RLQ6IPT4 315 aa35.39■■■■□ 3.26
CCDC84-203ENST00000526463 SHROOM2Q13796 1616 aa35.35■■■■□ 3.25
CCDC84-203ENST00000526463 RUSC2Q8N2Y8 1516 aa35.3■■■■□ 3.24
CCDC84-203ENST00000526463 CARMIL1Q5VZK9 1371 aa35.26■■■■□ 3.24
CCDC84-203ENST00000526463 ERCC6L2Q5T890 1561 aa35.22■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms