RNA–Protein interactions for RNA: ENST00000525523.1

AC055860.1-201, humanhuman

TSL 5 BASIC

Gene AC055860.1, Length 688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055860.1-201ENST00000525523 DDX54Q8TDD1 881 aaKnown RBP10.71□□□□□ -0.69
AC055860.1-201ENST00000525523 CENPJQ9HC77 1338 aaPredicted RBP10.71□□□□□ -0.69
AC055860.1-201ENST00000525523 ANKRD24Q8TF21 1146 aa10.7□□□□□ -0.7
AC055860.1-201ENST00000525523 ITGB4P16144 1822 aa10.7□□□□□ -0.7
AC055860.1-201ENST00000525523 RGPD2P0DJD1 1756 aa10.7□□□□□ -0.7
AC055860.1-201ENST00000525523 FAM161AQ3B820 660 aa10.69□□□□□ -0.7
AC055860.1-201ENST00000525523 TIAM2Q8IVF5 1701 aa10.69□□□□□ -0.7
AC055860.1-201ENST00000525523 USP31Q70CQ4 1352 aa10.68□□□□□ -0.7
AC055860.1-201ENST00000525523 AK7Q96M32 723 aa10.68□□□□□ -0.7
AC055860.1-201ENST00000525523 BCS1LQ9Y276 419 aa10.68□□□□□ -0.7
AC055860.1-201ENST00000525523 C4AP0C0L4 1744 aa10.67□□□□□ -0.7
AC055860.1-201ENST00000525523 PALLDQ8WX93 1383 aa10.67□□□□□ -0.7
AC055860.1-201ENST00000525523 TGFB2P61812 414 aa10.67□□□□□ -0.7
AC055860.1-201ENST00000525523 MAP2P11137 1827 aaKnown RBP10.67□□□□□ -0.7
AC055860.1-201ENST00000525523 SSFA2P28290 1259 aa10.66□□□□□ -0.7
AC055860.1-201ENST00000525523 C9orf131Q5VYM1 1079 aa10.66□□□□□ -0.7
AC055860.1-201ENST00000525523 LHX8Q68G74 356 aa10.66□□□□□ -0.7
AC055860.1-201ENST00000525523 ARHGAP27Q6ZUM4 889 aa10.66□□□□□ -0.7
AC055860.1-201ENST00000525523 PRDM10Q9NQV6 1147 aa10.66□□□□□ -0.7
AC055860.1-201ENST00000525523 MEGF6O75095 1541 aa10.66□□□□□ -0.7
AC055860.1-201ENST00000525523 KTN1Q86UP2 1357 aaKnown RBP10.65□□□□□ -0.7
AC055860.1-201ENST00000525523 PHF14O94880 888 aa10.65□□□□□ -0.7
AC055860.1-201ENST00000525523 EVC2Q86UK5 1308 aa10.64□□□□□ -0.71
AC055860.1-201ENST00000525523 ZC3H4Q9UPT8 1303 aaKnown RBP10.64□□□□□ -0.71
AC055860.1-201ENST00000525523 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.64□□□□□ -0.71
AC055860.1-201ENST00000525523 RRAGCQ9HB90 399 aa10.64□□□□□ -0.71
AC055860.1-201ENST00000525523 VIRMAQ69YN4 1812 aaKnown RBP10.63□□□□□ -0.71
AC055860.1-201ENST00000525523 GALR2O43603 387 aaPredicted RBP10.63□□□□□ -0.71
AC055860.1-201ENST00000525523 FCHSD2O94868 740 aa10.63□□□□□ -0.71
AC055860.1-201ENST00000525523 ZCRB1Q8TBF4 217 aaKnown RBP10.63□□□□□ -0.71
AC055860.1-201ENST00000525523 PHF12Q96QT6 1004 aa10.63□□□□□ -0.71
AC055860.1-201ENST00000525523 DCBLD2Q96PD2 775 aa10.62□□□□□ -0.71
AC055860.1-201ENST00000525523 RNF181Q9P0P0 153 aa10.62□□□□□ -0.71
AC055860.1-201ENST00000525523 FOXN1O15353 648 aa10.61□□□□□ -0.71
AC055860.1-201ENST00000525523 MMP10P09238 476 aa10.61□□□□□ -0.71
AC055860.1-201ENST00000525523 MLLT1Q03111 559 aaPredicted RBP10.61□□□□□ -0.71
AC055860.1-201ENST00000525523 AMIGO3Q86WK7 504 aa10.61□□□□□ -0.71
AC055860.1-201ENST00000525523 PCGF6Q9BYE7 350 aa10.61□□□□□ -0.71
AC055860.1-201ENST00000525523 CCDC88AQ3V6T2 1871 aa10.61□□□□□ -0.71
AC055860.1-201ENST00000525523 CGNL1Q0VF96 1302 aa10.6□□□□□ -0.71
AC055860.1-201ENST00000525523 A0A0G2JLW4 131 aa10.6□□□□□ -0.71
AC055860.1-201ENST00000525523 CTCFP49711 727 aaPredicted RBP10.6□□□□□ -0.71
AC055860.1-201ENST00000525523 SMARCC1Q92922 1105 aaPredicted RBP10.6□□□□□ -0.71
AC055860.1-201ENST00000525523 AIDAQ96BJ3 306 aa10.6□□□□□ -0.71
AC055860.1-201ENST00000525523 CCDC87Q9NVE4 849 aa10.6□□□□□ -0.71
AC055860.1-201ENST00000525523 ZNF831Q5JPB2 1677 aa10.6□□□□□ -0.71
AC055860.1-201ENST00000525523 DLEC1Q9Y238 1755 aa10.6□□□□□ -0.71
AC055860.1-201ENST00000525523 KDM6AO15550 1401 aaPredicted RBP10.59□□□□□ -0.71
AC055860.1-201ENST00000525523 COL5A3P25940 1745 aaPredicted RBP10.59□□□□□ -0.71
AC055860.1-201ENST00000525523 ABHD8Q96I13 439 aa10.59□□□□□ -0.71
AC055860.1-201ENST00000525523 PCDH11XQ9BZA7 1347 aa10.58□□□□□ -0.71
AC055860.1-201ENST00000525523 PCDH11YQ9BZA8 1340 aa10.58□□□□□ -0.71
AC055860.1-201ENST00000525523 EDC4Q6P2E9 1401 aaKnown RBP10.58□□□□□ -0.72
AC055860.1-201ENST00000525523 SBNO2Q9Y2G9 1366 aa10.58□□□□□ -0.72
AC055860.1-201ENST00000525523 VEGFAP15692 232 aaPredicted RBP10.58□□□□□ -0.72
AC055860.1-201ENST00000525523 DPEP1P16444 411 aa10.58□□□□□ -0.72
AC055860.1-201ENST00000525523 NBPF1Q3BBV0 1214 aa10.58□□□□□ -0.72
AC055860.1-201ENST00000525523 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.58□□□□□ -0.72
AC055860.1-201ENST00000525523 IP6K1Q92551 441 aa10.58□□□□□ -0.72
AC055860.1-201ENST00000525523 DCAF5Q96JK2 942 aa10.58□□□□□ -0.72
AC055860.1-201ENST00000525523 CD163L1Q9NR16 1453 aa10.57□□□□□ -0.72
AC055860.1-201ENST00000525523 RTL1A6NKG5 1358 aa10.57□□□□□ -0.72
AC055860.1-201ENST00000525523 CNTNAP1P78357 1384 aa10.57□□□□□ -0.72
AC055860.1-201ENST00000525523 DICER1Q9UPY3 1922 aaKnown RBP10.57□□□□□ -0.72
AC055860.1-201ENST00000525523 NME9Q86XW9 330 aa10.57□□□□□ -0.72
AC055860.1-201ENST00000525523 SMG6Q86US8 1419 aaKnown RBP10.57□□□□□ -0.72
AC055860.1-201ENST00000525523 GNPATO15228 680 aa10.56□□□□□ -0.72
AC055860.1-201ENST00000525523 LTV1Q96GA3 475 aaPredicted RBP10.56□□□□□ -0.72
AC055860.1-201ENST00000525523 PIM2Q9P1W9 311 aa10.56□□□□□ -0.72
AC055860.1-201ENST00000525523 MKRN1Q9UHC7 482 aaKnown RBP10.56□□□□□ -0.72
AC055860.1-201ENST00000525523 RAB3GAP2Q9H2M9 1393 aa10.55□□□□□ -0.72
AC055860.1-201ENST00000525523 PDE4DIPQ5VU43 2346 aa10.55□□□□□ -0.72
AC055860.1-201ENST00000525523 GLTPD2A6NH11 291 aa10.55□□□□□ -0.72
AC055860.1-201ENST00000525523 RGS19P49795 217 aa10.55□□□□□ -0.72
AC055860.1-201ENST00000525523 DALRD3Q5D0E6 543 aaKnown RBP10.55□□□□□ -0.72
AC055860.1-201ENST00000525523 MPRIPQ6WCQ1 1025 aa10.55□□□□□ -0.72
AC055860.1-201ENST00000525523 NLGN1Q8N2Q7 840 aa10.55□□□□□ -0.72
AC055860.1-201ENST00000525523 LINC00116Q8NCU8 138 aa10.55□□□□□ -0.72
AC055860.1-201ENST00000525523 THSD7BQ9C0I4 1608 aa10.55□□□□□ -0.72
AC055860.1-201ENST00000525523 SMIM5Q71RC9 77 aa10.54□□□□□ -0.72
AC055860.1-201ENST00000525523 RAPGEF4Q8WZA2 1011 aa10.54□□□□□ -0.72
AC055860.1-201ENST00000525523 PARP3Q9Y6F1 533 aa10.54□□□□□ -0.72
AC055860.1-201ENST00000525523 LOC102724428A0A0B4J2F2 783 aa10.53□□□□□ -0.72
AC055860.1-201ENST00000525523 KCNA3P22001 575 aa10.53□□□□□ -0.72
AC055860.1-201ENST00000525523 HOXC9P31274 260 aa10.53□□□□□ -0.72
AC055860.1-201ENST00000525523 LBX1P52954 281 aa10.53□□□□□ -0.72
AC055860.1-201ENST00000525523 SIK1P57059 783 aa10.53□□□□□ -0.72
AC055860.1-201ENST00000525523 TMF1P82094 1093 aa10.53□□□□□ -0.72
AC055860.1-201ENST00000525523 MIER1Q8N108 512 aa10.53□□□□□ -0.72
AC055860.1-201ENST00000525523 TATP17735 454 aaPredicted RBP10.52□□□□□ -0.73
AC055860.1-201ENST00000525523 LMNB1P20700 586 aa10.51□□□□□ -0.73
AC055860.1-201ENST00000525523 RASSF7Q02833 373 aa10.51□□□□□ -0.73
AC055860.1-201ENST00000525523 HDGFL2Q7Z4V5 671 aaPredicted RBP10.51□□□□□ -0.73
AC055860.1-201ENST00000525523 RTCBQ9Y3I0 505 aaKnown RBP10.51□□□□□ -0.73
AC055860.1-201ENST00000525523 TNRC18O15417 2968 aaPredicted RBP10.51□□□□□ -0.73
AC055860.1-201ENST00000525523 MAP3K19Q56UN5 1328 aa10.51□□□□□ -0.73
AC055860.1-201ENST00000525523 SCN4AP35499 1836 aa10.51□□□□□ -0.73
AC055860.1-201ENST00000525523 CCDC85CA6NKD9 419 aa10.5□□□□□ -0.73
AC055860.1-201ENST00000525523 HSPA8P11142 646 aaKnown RBP10.5□□□□□ -0.73
AC055860.1-201ENST00000525523 AMPHP49418 695 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms