RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 CAPN2P17655 700 aa13.58□□□□□ -0.24
CLNS1A-204ENST00000525428 OTUD7AQ8TE49 926 aaPredicted RBP13.58□□□□□ -0.24
CLNS1A-204ENST00000525428 PPIP5K1Q6PFW1 1433 aa13.58□□□□□ -0.24
CLNS1A-204ENST00000525428 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
CLNS1A-204ENST00000525428 SIRT2Q8IXJ6 389 aa13.58□□□□□ -0.24
CLNS1A-204ENST00000525428 TMX3Q96JJ7 454 aa13.58□□□□□ -0.24
CLNS1A-204ENST00000525428 CFAP53Q96M91 514 aa13.58□□□□□ -0.24
CLNS1A-204ENST00000525428 DDX41Q9UJV9 622 aaKnown RBP13.58□□□□□ -0.24
CLNS1A-204ENST00000525428 AMOTL2Q9Y2J4 779 aa13.58□□□□□ -0.24
CLNS1A-204ENST00000525428 AP5Z1O43299 807 aa13.57□□□□□ -0.24
CLNS1A-204ENST00000525428 KDM4AO75164 1064 aa13.57□□□□□ -0.24
CLNS1A-204ENST00000525428 CCDC27Q2M243 656 aa13.57□□□□□ -0.24
CLNS1A-204ENST00000525428 FAM184AQ8NB25 1140 aa13.57□□□□□ -0.24
CLNS1A-204ENST00000525428 EVC2Q86UK5 1308 aa13.57□□□□□ -0.24
CLNS1A-204ENST00000525428 NPHP1O15259 732 aa13.56□□□□□ -0.24
CLNS1A-204ENST00000525428 PLEKHM2Q8IWE5 1019 aa13.56□□□□□ -0.24
CLNS1A-204ENST00000525428 IFT57Q9NWB7 429 aa13.56□□□□□ -0.24
CLNS1A-204ENST00000525428 GIMAP6Q6P9H5 292 aa13.56□□□□□ -0.24
CLNS1A-204ENST00000525428 ZBTB7BO15156 539 aaPredicted RBP13.56□□□□□ -0.24
CLNS1A-204ENST00000525428 PTGS1P23219 599 aa13.56□□□□□ -0.24
CLNS1A-204ENST00000525428 IRX3P78415 501 aaPredicted RBP13.56□□□□□ -0.24
CLNS1A-204ENST00000525428 INTS3Q68E01 1043 aaKnown RBP13.56□□□□□ -0.24
CLNS1A-204ENST00000525428 ANKLE2Q86XL3 938 aa13.56□□□□□ -0.24
CLNS1A-204ENST00000525428 CABP1Q9NZU7 370 aa13.56□□□□□ -0.24
CLNS1A-204ENST00000525428 BRD1O95696 1058 aa13.55□□□□□ -0.24
CLNS1A-204ENST00000525428 LAMC1P11047 1609 aa13.55□□□□□ -0.24
CLNS1A-204ENST00000525428 UVSSAQ2YD98 709 aa13.55□□□□□ -0.24
CLNS1A-204ENST00000525428 ATAD2Q6PL18 1390 aa13.55□□□□□ -0.24
CLNS1A-204ENST00000525428 ADAMTS13Q76LX8 1427 aa13.55□□□□□ -0.24
CLNS1A-204ENST00000525428 UBR1Q8IWV7 1749 aa13.55□□□□□ -0.24
CLNS1A-204ENST00000525428 KIF18AQ8NI77 898 aa13.55□□□□□ -0.24
CLNS1A-204ENST00000525428 ROBO2Q9HCK4 1378 aa13.55□□□□□ -0.24
CLNS1A-204ENST00000525428 DTNBO60941 627 aa13.55□□□□□ -0.24
CLNS1A-204ENST00000525428 KCNA6P17658 529 aa13.54□□□□□ -0.24
CLNS1A-204ENST00000525428 LRMPQ12912 555 aa13.54□□□□□ -0.24
CLNS1A-204ENST00000525428 KRT222Q8N1A0 295 aa13.54□□□□□ -0.24
CLNS1A-204ENST00000525428 CHMP4CQ96CF2 233 aa13.54□□□□□ -0.24
CLNS1A-204ENST00000525428 KIAA1210Q9ULL0 1709 aa13.54□□□□□ -0.24
CLNS1A-204ENST00000525428 TNNT1P13805 278 aa13.53□□□□□ -0.24
CLNS1A-204ENST00000525428 CT47B1P0C2W7 299 aaPredicted RBP13.53□□□□□ -0.24
CLNS1A-204ENST00000525428 SDSP20132 328 aa13.53□□□□□ -0.24
CLNS1A-204ENST00000525428 TTC22Q5TAA0 569 aa13.53□□□□□ -0.24
CLNS1A-204ENST00000525428 DRC7Q8IY82 874 aa13.53□□□□□ -0.24
CLNS1A-204ENST00000525428 RTF1Q92541 710 aaKnown RBP13.53□□□□□ -0.24
CLNS1A-204ENST00000525428 SETBP1Q9Y6X0 1596 aa13.53□□□□□ -0.24
CLNS1A-204ENST00000525428 TMPOP42166 694 aaKnown RBP13.53□□□□□ -0.24
CLNS1A-204ENST00000525428 CASC1Q6TDU7 716 aa13.53□□□□□ -0.24
CLNS1A-204ENST00000525428 CCDC112Q8NEF3 446 aa13.53□□□□□ -0.24
CLNS1A-204ENST00000525428 TRIM35Q9UPQ4 493 aa13.53□□□□□ -0.24
CLNS1A-204ENST00000525428 CNPY2Q9Y2B0 182 aa13.53□□□□□ -0.24
CLNS1A-204ENST00000525428 MORC2Q9Y6X9 1032 aaPredicted RBP13.53□□□□□ -0.24
CLNS1A-204ENST00000525428 NSD3Q9BZ95 1437 aa13.52□□□□□ -0.24
CLNS1A-204ENST00000525428 IQSEC2Q5JU85 1478 aa13.52□□□□□ -0.24
CLNS1A-204ENST00000525428 CCDC183Q5T5S1 534 aa13.52□□□□□ -0.24
CLNS1A-204ENST00000525428 CALCOCO1Q9P1Z2 691 aa13.52□□□□□ -0.24
CLNS1A-204ENST00000525428 PTPRUQ92729 1446 aa13.52□□□□□ -0.24
CLNS1A-204ENST00000525428 FBLN1P23142 703 aa13.52□□□□□ -0.25
CLNS1A-204ENST00000525428 TNNT3P45378 269 aaPredicted RBP13.52□□□□□ -0.25
CLNS1A-204ENST00000525428 CHMP3Q9Y3E7 222 aa13.52□□□□□ -0.25
CLNS1A-204ENST00000525428 PLEKHG1Q9ULL1 1385 aa13.52□□□□□ -0.25
CLNS1A-204ENST00000525428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.51□□□□□ -0.25
CLNS1A-204ENST00000525428 ADAMTSL3P82987 1691 aa13.51□□□□□ -0.25
CLNS1A-204ENST00000525428 FIBPO43427 364 aa13.51□□□□□ -0.25
CLNS1A-204ENST00000525428 UPF3BQ9BZI7 483 aaKnown RBP13.51□□□□□ -0.25
CLNS1A-204ENST00000525428 ABCC11Q96J66 1382 aa13.51□□□□□ -0.25
CLNS1A-204ENST00000525428 NRXN3Q9Y4C0 1643 aa13.5□□□□□ -0.25
CLNS1A-204ENST00000525428 KMT5BQ4FZB7 885 aa13.5□□□□□ -0.25
CLNS1A-204ENST00000525428 TMX1Q9H3N1 280 aa13.5□□□□□ -0.25
CLNS1A-204ENST00000525428 MX1P20591 662 aa13.5□□□□□ -0.25
CLNS1A-204ENST00000525428 CCDC186Q7Z3E2 898 aa13.5□□□□□ -0.25
CLNS1A-204ENST00000525428 NRBP1Q9UHY1 535 aa13.5□□□□□ -0.25
CLNS1A-204ENST00000525428 ANKRD36BQ8N2N9 1353 aa13.5□□□□□ -0.25
CLNS1A-204ENST00000525428 TULP4Q9NRJ4 1543 aa13.5□□□□□ -0.25
CLNS1A-204ENST00000525428 GOLGA6L6A8MZA4 724 aa13.5□□□□□ -0.25
CLNS1A-204ENST00000525428 REC8O95072 547 aa13.5□□□□□ -0.25
CLNS1A-204ENST00000525428 HNRNPH2P55795 449 aaKnown RBP13.5□□□□□ -0.25
CLNS1A-204ENST00000525428 GGNBP2Q9H3C7 697 aa13.5□□□□□ -0.25
CLNS1A-204ENST00000525428 TBX22Q9Y458 520 aa13.5□□□□□ -0.25
CLNS1A-204ENST00000525428 TPD52L1Q16890 204 aaPredicted RBP13.49□□□□□ -0.25
CLNS1A-204ENST00000525428 LARP6Q9BRS8 491 aaKnown RBP13.49□□□□□ -0.25
CLNS1A-204ENST00000525428 QRICH2Q9H0J4 1663 aa13.49□□□□□ -0.25
CLNS1A-204ENST00000525428 SMTNL1A8MU46 457 aa13.49□□□□□ -0.25
CLNS1A-204ENST00000525428 WASLO00401 505 aaPredicted RBP13.49□□□□□ -0.25
CLNS1A-204ENST00000525428 CEP170BQ9Y4F5 1589 aaPredicted RBP13.49□□□□□ -0.25
CLNS1A-204ENST00000525428 MYO3AQ8NEV4 1616 aa13.48□□□□□ -0.25
CLNS1A-204ENST00000525428 SBNO2Q9Y2G9 1366 aa13.48□□□□□ -0.25
CLNS1A-204ENST00000525428 GTF3C6Q969F1 213 aa13.48□□□□□ -0.25
CLNS1A-204ENST00000525428 ARHGEF28Q8N1W1 1705 aaKnown RBP13.48□□□□□ -0.25
CLNS1A-204ENST00000525428 NUDT16Q96DE0 195 aaKnown RBP13.47□□□□□ -0.25
CLNS1A-204ENST00000525428 THUMPD2Q9BTF0 503 aaKnown RBP13.47□□□□□ -0.25
CLNS1A-204ENST00000525428 SRCIN1Q9C0H9 1055 aa13.47□□□□□ -0.25
CLNS1A-204ENST00000525428 ZNF215Q9UL58 517 aaPredicted RBP13.47□□□□□ -0.25
CLNS1A-204ENST00000525428 TULP2O00295 520 aa13.47□□□□□ -0.25
CLNS1A-204ENST00000525428 TSHZ3Q63HK5 1081 aa13.47□□□□□ -0.25
CLNS1A-204ENST00000525428 ZRANB1Q9UGI0 708 aa13.47□□□□□ -0.25
CLNS1A-204ENST00000525428 PALD1Q9ULE6 856 aa13.47□□□□□ -0.25
CLNS1A-204ENST00000525428 ARHGAP23Q9P227 1491 aa13.47□□□□□ -0.25
CLNS1A-204ENST00000525428 ERC2O15083 957 aa13.47□□□□□ -0.25
CLNS1A-204ENST00000525428 SLC20A2Q08357 652 aa13.47□□□□□ -0.25
CLNS1A-204ENST00000525428 ELF2Q15723 593 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms