RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 MCCP23508 829 aa14.01□□□□□ -0.17
PTPRK-217ENST00000524534 HSP90AB2PQ58FF8 381 aa14.01□□□□□ -0.17
PTPRK-217ENST00000524534 SLC4A10Q6U841 1118 aa14.01□□□□□ -0.17
PTPRK-217ENST00000524534 MIS18AQ9NYP9 233 aa14.01□□□□□ -0.17
PTPRK-217ENST00000524534 PEAK1Q9H792 1746 aa14.01□□□□□ -0.17
PTPRK-217ENST00000524534 ARHGEF10O15013 1369 aa14.01□□□□□ -0.17
PTPRK-217ENST00000524534 PALD1Q9ULE6 856 aa14.01□□□□□ -0.17
PTPRK-217ENST00000524534 EXOC6BQ9Y2D4 811 aa14.01□□□□□ -0.17
PTPRK-217ENST00000524534 SSH2Q76I76 1423 aa14□□□□□ -0.17
PTPRK-217ENST00000524534 MX1P20591 662 aa14□□□□□ -0.17
PTPRK-217ENST00000524534 CHMLP26374 656 aa14□□□□□ -0.17
PTPRK-217ENST00000524534 FOXD4L5Q5VV16 416 aaPredicted RBP14□□□□□ -0.17
PTPRK-217ENST00000524534 FOXD4L4Q8WXT5 416 aaPredicted RBP14□□□□□ -0.17
PTPRK-217ENST00000524534 LRRCC1Q9C099 1032 aa14□□□□□ -0.17
PTPRK-217ENST00000524534 CCDC39Q9UFE4 941 aa14□□□□□ -0.17
PTPRK-217ENST00000524534 R3HCC1Q9Y3T6 440 aaKnown RBP14□□□□□ -0.17
PTPRK-217ENST00000524534 USP31Q70CQ4 1352 aa14□□□□□ -0.17
PTPRK-217ENST00000524534 XPCQ01831 940 aaPredicted RBP14□□□□□ -0.17
PTPRK-217ENST00000524534 TSHZ3Q63HK5 1081 aa14□□□□□ -0.17
PTPRK-217ENST00000524534 STAP2Q9UGK3 403 aa14□□□□□ -0.17
PTPRK-217ENST00000524534 TSPYL4Q9UJ04 414 aa14□□□□□ -0.17
PTPRK-217ENST00000524534 NALCNQ8IZF0 1738 aa13.99□□□□□ -0.17
PTPRK-217ENST00000524534 ATP8B2P98198 1209 aa13.99□□□□□ -0.17
PTPRK-217ENST00000524534 CSPP1Q1MSJ5 1256 aa13.99□□□□□ -0.17
PTPRK-217ENST00000524534 ZMYND15Q9H091 742 aa13.99□□□□□ -0.17
PTPRK-217ENST00000524534 FOXO3O43524 673 aa13.98□□□□□ -0.17
PTPRK-217ENST00000524534 MTHFSDQ2M296 383 aaKnown RBP13.98□□□□□ -0.17
PTPRK-217ENST00000524534 ACEP12821 1306 aa13.98□□□□□ -0.17
PTPRK-217ENST00000524534 MAP3K19Q56UN5 1328 aa13.98□□□□□ -0.17
PTPRK-217ENST00000524534 PLEKHG3A1L390 1219 aa13.98□□□□□ -0.17
PTPRK-217ENST00000524534 EPB41L2O43491 1005 aaKnown RBP13.98□□□□□ -0.17
PTPRK-217ENST00000524534 GNAI3P08754 354 aa13.98□□□□□ -0.17
PTPRK-217ENST00000524534 TSPY26PQ9H489 355 aa13.98□□□□□ -0.17
PTPRK-217ENST00000524534 PNMA6EA0A0J9YXQ4 647 aa13.97□□□□□ -0.17
PTPRK-217ENST00000524534 RTF1Q92541 710 aaKnown RBP13.97□□□□□ -0.17
PTPRK-217ENST00000524534 SYAP1Q96A49 352 aaPredicted RBP13.97□□□□□ -0.17
PTPRK-217ENST00000524534 SRCIN1Q9C0H9 1055 aa13.97□□□□□ -0.17
PTPRK-217ENST00000524534 ANO2Q9NQ90 1003 aa13.97□□□□□ -0.17
PTPRK-217ENST00000524534 ROBO2Q9HCK4 1378 aa13.96□□□□□ -0.17
PTPRK-217ENST00000524534 USP6P35125 1406 aa13.96□□□□□ -0.17
PTPRK-217ENST00000524534 TOPAZ1Q8N9V7 1692 aa13.96□□□□□ -0.17
PTPRK-217ENST00000524534 RNF214Q8ND24 703 aa13.96□□□□□ -0.17
PTPRK-217ENST00000524534 AOX1Q06278 1338 aa13.96□□□□□ -0.17
PTPRK-217ENST00000524534 KDRP35968 1356 aa13.96□□□□□ -0.17
PTPRK-217ENST00000524534 TRIM6-TRIM34B2RNG4 842 aa13.95□□□□□ -0.18
PTPRK-217ENST00000524534 FLIIQ13045 1269 aa13.95□□□□□ -0.18
PTPRK-217ENST00000524534 RILPL2Q969X0 211 aa13.95□□□□□ -0.18
PTPRK-217ENST00000524534 STK31Q9BXU1 1019 aa13.95□□□□□ -0.18
PTPRK-217ENST00000524534 PLEKHG5O94827 1062 aa13.95□□□□□ -0.18
PTPRK-217ENST00000524534 UQCRHLA0A096LP55 91 aa13.94□□□□□ -0.18
PTPRK-217ENST00000524534 UQCRHP07919 91 aa13.94□□□□□ -0.18
PTPRK-217ENST00000524534 HDGFP51858 240 aaKnown RBP13.94□□□□□ -0.18
PTPRK-217ENST00000524534 NOL8Q76FK4 1167 aaKnown RBP13.94□□□□□ -0.18
PTPRK-217ENST00000524534 UNC5CLQ8IV45 518 aa13.94□□□□□ -0.18
PTPRK-217ENST00000524534 MAP7D2Q96T17 732 aa13.94□□□□□ -0.18
PTPRK-217ENST00000524534 XRN1Q8IZH2 1706 aaKnown RBP13.94□□□□□ -0.18
PTPRK-217ENST00000524534 WDR33Q9C0J8 1336 aaKnown RBP13.94□□□□□ -0.18
PTPRK-217ENST00000524534 RBM10P98175 930 aaKnown RBP13.94□□□□□ -0.18
PTPRK-217ENST00000524534 GADD45BO75293 160 aaPredicted RBP13.93□□□□□ -0.18
PTPRK-217ENST00000524534 PHF14O94880 888 aa13.93□□□□□ -0.18
PTPRK-217ENST00000524534 HSPA4P34932 840 aa13.93□□□□□ -0.18
PTPRK-217ENST00000524534 CCDC30Q5VVM6 783 aa13.93□□□□□ -0.18
PTPRK-217ENST00000524534 USP48Q86UV5 1035 aa13.93□□□□□ -0.18
PTPRK-217ENST00000524534 TMEM87AQ8NBN3 555 aa13.93□□□□□ -0.18
PTPRK-217ENST00000524534 PKNOX2Q96KN3 472 aa13.93□□□□□ -0.18
PTPRK-217ENST00000524534 UPF3BQ9BZI7 483 aaKnown RBP13.93□□□□□ -0.18
PTPRK-217ENST00000524534 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.93□□□□□ -0.18
PTPRK-217ENST00000524534 HTATSF1O43719 755 aaKnown RBP13.93□□□□□ -0.18
PTPRK-217ENST00000524534 FKBP5Q13451 457 aaPredicted RBP13.93□□□□□ -0.18
PTPRK-217ENST00000524534 DYNC1I1O14576 645 aa13.92□□□□□ -0.18
PTPRK-217ENST00000524534 UVSSAQ2YD98 709 aa13.92□□□□□ -0.18
PTPRK-217ENST00000524534 SASS6Q6UVJ0 657 aa13.92□□□□□ -0.18
PTPRK-217ENST00000524534 IL25Q9H293 177 aa13.92□□□□□ -0.18
PTPRK-217ENST00000524534 LRRFIP2Q9Y608 721 aaKnown RBP13.92□□□□□ -0.18
PTPRK-217ENST00000524534 RIMS1Q86UR5 1692 aaKnown RBP13.92□□□□□ -0.18
PTPRK-217ENST00000524534 FAM208AQ9UK61 1670 aaKnown RBP13.92□□□□□ -0.18
PTPRK-217ENST00000524534 SBNO1A3KN83 1393 aa13.92□□□□□ -0.18
PTPRK-217ENST00000524534 IGSF1Q8N6C5 1336 aa13.92□□□□□ -0.18
PTPRK-217ENST00000524534 LRRC37A3O60309 1634 aa13.91□□□□□ -0.18
PTPRK-217ENST00000524534 FLT4P35916 1363 aa13.91□□□□□ -0.18
PTPRK-217ENST00000524534 RPAP1Q9BWH6 1393 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-217ENST00000524534 SOS1Q07889 1333 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-217ENST00000524534 FAM184AQ8NB25 1140 aa13.91□□□□□ -0.18
PTPRK-217ENST00000524534 GDPD2Q9HCC8 539 aa13.91□□□□□ -0.18
PTPRK-217ENST00000524534 FAM13BQ9NYF5 915 aa13.91□□□□□ -0.18
PTPRK-217ENST00000524534 PXDNLA1KZ92 1463 aa13.91□□□□□ -0.18
PTPRK-217ENST00000524534 MLECQ14165 292 aa13.91□□□□□ -0.18
PTPRK-217ENST00000524534 SSH3Q8TE77 659 aa13.91□□□□□ -0.18
PTPRK-217ENST00000524534 EYA1Q99502 592 aa13.91□□□□□ -0.18
PTPRK-217ENST00000524534 USP44Q9H0E7 712 aa13.91□□□□□ -0.18
PTPRK-217ENST00000524534 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.91□□□□□ -0.18
PTPRK-217ENST00000524534 CEP170BQ9Y4F5 1589 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-217ENST00000524534 FMN2Q9NZ56 1722 aa13.9□□□□□ -0.18
PTPRK-217ENST00000524534 N4BP2Q86UW6 1770 aaPredicted RBP13.9□□□□□ -0.18
PTPRK-217ENST00000524534 ADAMTS13Q76LX8 1427 aa13.9□□□□□ -0.18
PTPRK-217ENST00000524534 TTC21AQ8NDW8 1320 aa13.9□□□□□ -0.18
PTPRK-217ENST00000524534 SOX12O15370 315 aa13.9□□□□□ -0.18
PTPRK-217ENST00000524534 KIAA2012Q0VF49 1180 aa13.9□□□□□ -0.18
PTPRK-217ENST00000524534 RAB11FIP3O75154 756 aa13.89□□□□□ -0.19
PTPRK-217ENST00000524534 PTMAP06454 111 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 380 ms