RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 GAS2L2Q8NHY3 880 aa23.32■■□□□ 1.32
PACSIN3-202ENST00000524509 LY75O60449 1722 aa23.32■■□□□ 1.32
PACSIN3-202ENST00000524509 RSPH6AQ9H0K4 717 aa23.31■■□□□ 1.32
PACSIN3-202ENST00000524509 RGPD2P0DJD1 1756 aa23.31■■□□□ 1.32
PACSIN3-202ENST00000524509 GRIN3BO60391 1043 aa23.3■■□□□ 1.32
PACSIN3-202ENST00000524509 PRKAR2BP31323 418 aa23.29■■□□□ 1.32
PACSIN3-202ENST00000524509 NKX1-1Q15270 411 aaPredicted RBP23.29■■□□□ 1.32
PACSIN3-202ENST00000524509 ZNF530Q6P9A1 599 aaPredicted RBP23.29■■□□□ 1.32
PACSIN3-202ENST00000524509 MRS2Q9HD23 443 aa23.29■■□□□ 1.32
PACSIN3-202ENST00000524509 DOT1LQ8TEK3 1739 aa23.28■■□□□ 1.32
PACSIN3-202ENST00000524509 PHKG2P15735 406 aa23.28■■□□□ 1.32
PACSIN3-202ENST00000524509 PRIM1P49642 420 aaKnown RBP23.28■■□□□ 1.32
PACSIN3-202ENST00000524509 KCNQ4P56696 695 aa23.28■■□□□ 1.32
PACSIN3-202ENST00000524509 SYTL4Q96C24 671 aaPredicted RBP23.28■■□□□ 1.32
PACSIN3-202ENST00000524509 MAPK8IP3Q9UPT6 1336 aa23.28■■□□□ 1.32
PACSIN3-202ENST00000524509 CYP27B1O15528 508 aa23.27■■□□□ 1.32
PACSIN3-202ENST00000524509 YBX3P16989 372 aaKnown RBP eCLIP23.27■■□□□ 1.32
PACSIN3-202ENST00000524509 AKAP4Q5JQC9 854 aa23.27■■□□□ 1.32
PACSIN3-202ENST00000524509 DCAF5Q96JK2 942 aa23.26■■□□□ 1.31
PACSIN3-202ENST00000524509 CCER2I3L3R5 266 aa23.24■■□□□ 1.31
PACSIN3-202ENST00000524509 CCNL1Q9UK58 526 aaPredicted RBP23.24■■□□□ 1.31
PACSIN3-202ENST00000524509 HMGB2P26583 209 aaKnown RBP23.23■■□□□ 1.31
PACSIN3-202ENST00000524509 PKD1L3Q7Z443 1732 aa23.22■■□□□ 1.31
PACSIN3-202ENST00000524509 ERVV-2B6SEH9 535 aa23.22■■□□□ 1.31
PACSIN3-202ENST00000524509 MTHFSDQ2M296 383 aaKnown RBP23.22■■□□□ 1.31
PACSIN3-202ENST00000524509 COL23A1Q86Y22 540 aaPredicted RBP23.22■■□□□ 1.31
PACSIN3-202ENST00000524509 GNAT3A8MTJ3 354 aa23.21■■□□□ 1.31
PACSIN3-202ENST00000524509 HTATSF1O43719 755 aaKnown RBP23.21■■□□□ 1.31
PACSIN3-202ENST00000524509 RUNDC1Q96C34 613 aa23.21■■□□□ 1.31
PACSIN3-202ENST00000524509 ADAMTS8Q9UP79 889 aa23.21■■□□□ 1.31
PACSIN3-202ENST00000524509 ATP10DQ9P241 1426 aa23.2■■□□□ 1.3
PACSIN3-202ENST00000524509 MSH5O43196 834 aa23.2■■□□□ 1.3
PACSIN3-202ENST00000524509 RTF1Q92541 710 aaKnown RBP23.2■■□□□ 1.3
PACSIN3-202ENST00000524509 PLEKHF1Q96S99 279 aa23.2■■□□□ 1.3
PACSIN3-202ENST00000524509 PNISRQ8TF01 805 aaKnown RBP23.19■■□□□ 1.3
PACSIN3-202ENST00000524509 PHACTR3Q96KR7 559 aa23.18■■□□□ 1.3
PACSIN3-202ENST00000524509 LMOD3Q0VAK6 560 aa23.17■■□□□ 1.3
PACSIN3-202ENST00000524509 TMOD3Q9NYL9 352 aa23.17■■□□□ 1.3
PACSIN3-202ENST00000524509 CD2APQ9Y5K6 639 aa23.17■■□□□ 1.3
PACSIN3-202ENST00000524509 NFE2L2Q16236 605 aa23.16■■□□□ 1.3
PACSIN3-202ENST00000524509 CABP4P57796 275 aa23.15■■□□□ 1.3
PACSIN3-202ENST00000524509 C5P01031 1676 aa23.14■■□□□ 1.29
PACSIN3-202ENST00000524509 MSL1Q68DK7 614 aa23.14■■□□□ 1.29
PACSIN3-202ENST00000524509 MPRIPQ6WCQ1 1025 aa23.14■■□□□ 1.29
PACSIN3-202ENST00000524509 FLAD1Q8NFF5 587 aa23.14■■□□□ 1.29
PACSIN3-202ENST00000524509 SMARCC1Q92922 1105 aaPredicted RBP23.14■■□□□ 1.29
PACSIN3-202ENST00000524509 GPBP1L1Q9HC44 474 aaPredicted RBP23.14■■□□□ 1.29
PACSIN3-202ENST00000524509 CCDC184Q52MB2 194 aa23.13■■□□□ 1.29
PACSIN3-202ENST00000524509 ADCY9O60503 1353 aa23.13■■□□□ 1.29
PACSIN3-202ENST00000524509 RNMTO43148 476 aaKnown RBP23.12■■□□□ 1.29
PACSIN3-202ENST00000524509 TEFQ10587 303 aa23.12■■□□□ 1.29
PACSIN3-202ENST00000524509 TAF1LQ8IZX4 1826 aa23.1■■□□□ 1.29
PACSIN3-202ENST00000524509 HSPA6P17066 643 aa23.1■■□□□ 1.29
PACSIN3-202ENST00000524509 TMPOP42166 694 aaKnown RBP23.09■■□□□ 1.29
PACSIN3-202ENST00000524509 RIPK4P57078 832 aa23.09■■□□□ 1.29
PACSIN3-202ENST00000524509 NCBP3Q53F19 620 aaKnown RBP23.09■■□□□ 1.29
PACSIN3-202ENST00000524509 NGEFQ8N5V2 710 aa23.09■■□□□ 1.29
PACSIN3-202ENST00000524509 SLC52A2Q9HAB3 445 aa23.09■■□□□ 1.29
PACSIN3-202ENST00000524509 CCDC146Q8IYE0 955 aa23.08■■□□□ 1.29
PACSIN3-202ENST00000524509 PIGBQ92521 554 aa23.08■■□□□ 1.29
PACSIN3-202ENST00000524509 KDM6AO15550 1401 aaPredicted RBP23.08■■□□□ 1.28
PACSIN3-202ENST00000524509 FAM9BQ8IZU0 186 aa23.07■■□□□ 1.28
PACSIN3-202ENST00000524509 MIER1Q8N108 512 aa23.07■■□□□ 1.28
PACSIN3-202ENST00000524509 NFATC2IPQ8NCF5 419 aa23.07■■□□□ 1.28
PACSIN3-202ENST00000524509 PALLDQ8WX93 1383 aa23.06■■□□□ 1.28
PACSIN3-202ENST00000524509 IL17REQ8NFR9 667 aa23.06■■□□□ 1.28
PACSIN3-202ENST00000524509 LGR6Q9HBX8 967 aa23.06■■□□□ 1.28
PACSIN3-202ENST00000524509 CEMIPQ8WUJ3 1361 aa23.05■■□□□ 1.28
PACSIN3-202ENST00000524509 CALD1Q05682 793 aaKnown RBP23.05■■□□□ 1.28
PACSIN3-202ENST00000524509 ZNF526Q8TF50 670 aaPredicted RBP23.04■■□□□ 1.28
PACSIN3-202ENST00000524509 C4BP0C0L5 1744 aa23.04■■□□□ 1.28
PACSIN3-202ENST00000524509 APAF1O14727 1248 aa23.02■■□□□ 1.28
PACSIN3-202ENST00000524509 TOGARAM1Q9Y4F4 1720 aa23.02■■□□□ 1.28
PACSIN3-202ENST00000524509 TAF7Q15545 349 aaPredicted RBP23.01■■□□□ 1.27
PACSIN3-202ENST00000524509 NEUROD2Q15784 382 aa23.01■■□□□ 1.27
PACSIN3-202ENST00000524509 MCM10Q7L590 875 aa23.01■■□□□ 1.27
PACSIN3-202ENST00000524509 TTC5Q8N0Z6 440 aa23.01■■□□□ 1.27
PACSIN3-202ENST00000524509 AK7Q96M32 723 aa23.01■■□□□ 1.27
PACSIN3-202ENST00000524509 BABAM1Q9NWV8 329 aa23.01■■□□□ 1.27
PACSIN3-202ENST00000524509 UBR3Q6ZT12 1888 aa23■■□□□ 1.27
PACSIN3-202ENST00000524509 MRC1P22897 1456 aa22.99■■□□□ 1.27
PACSIN3-202ENST00000524509 ITGB4P16144 1822 aa22.99■■□□□ 1.27
PACSIN3-202ENST00000524509 CCDC27Q2M243 656 aa22.99■■□□□ 1.27
PACSIN3-202ENST00000524509 ATG3Q9NT62 314 aa22.99■■□□□ 1.27
PACSIN3-202ENST00000524509 BTBD11A6QL63 1104 aa22.98■■□□□ 1.27
PACSIN3-202ENST00000524509 AMIGO3Q86WK7 504 aa22.98■■□□□ 1.27
PACSIN3-202ENST00000524509 ASAP1Q9ULH1 1129 aa22.98■■□□□ 1.27
PACSIN3-202ENST00000524509 ADAMTS7Q9UKP4 1686 aa22.97■■□□□ 1.27
PACSIN3-202ENST00000524509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.97■■□□□ 1.27
PACSIN3-202ENST00000524509 KIF3CO14782 793 aa22.97■■□□□ 1.27
PACSIN3-202ENST00000524509 RRP7AQ9Y3A4 280 aaKnown RBP22.97■■□□□ 1.27
PACSIN3-202ENST00000524509 LOC102724428A0A0B4J2F2 783 aa22.96■■□□□ 1.27
PACSIN3-202ENST00000524509 SIK1P57059 783 aa22.96■■□□□ 1.27
PACSIN3-202ENST00000524509 DCTN1Q14203 1278 aa22.96■■□□□ 1.27
PACSIN3-202ENST00000524509 SCN11AQ9UI33 1791 aa22.96■■□□□ 1.27
PACSIN3-202ENST00000524509 PHF14O94880 888 aa22.95■■□□□ 1.26
PACSIN3-202ENST00000524509 SSFA2P28290 1259 aa22.95■■□□□ 1.26
PACSIN3-202ENST00000524509 ZNF790Q6PG37 636 aa22.95■■□□□ 1.26
PACSIN3-202ENST00000524509 CICQ96RK0 1608 aaPredicted RBP22.94■■□□□ 1.26
PACSIN3-202ENST00000524509 VSIG10Q8N0Z9 540 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms