RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 A0A0U1RQG5 324 aaPredicted RBP9.02□□□□□ -0.96
HMBOX1-211ENST00000524238 ZSCAN22P10073 491 aaPredicted RBP9.02□□□□□ -0.96
HMBOX1-211ENST00000524238 CCT4P50991 539 aaKnown RBP9.02□□□□□ -0.96
HMBOX1-211ENST00000524238 ATP2B3Q16720 1220 aa9.02□□□□□ -0.96
HMBOX1-211ENST00000524238 ZNF771Q7L3S4 317 aaPredicted RBP9.02□□□□□ -0.96
HMBOX1-211ENST00000524238 C16orf71Q8IYS4 520 aaPredicted RBP9.02□□□□□ -0.96
HMBOX1-211ENST00000524238 MAP2P11137 1827 aaKnown RBP9.02□□□□□ -0.97
HMBOX1-211ENST00000524238 CAVIN2O95810 425 aa9.02□□□□□ -0.97
HMBOX1-211ENST00000524238 HCLS1P14317 486 aaPredicted RBP9.02□□□□□ -0.97
HMBOX1-211ENST00000524238 RNF20Q5VTR2 975 aa9.02□□□□□ -0.97
HMBOX1-211ENST00000524238 FOXD4L5Q5VV16 416 aaPredicted RBP9.02□□□□□ -0.97
HMBOX1-211ENST00000524238 FOXD4L4Q8WXT5 416 aaPredicted RBP9.02□□□□□ -0.97
HMBOX1-211ENST00000524238 PTPRMP28827 1452 aa9.02□□□□□ -0.97
HMBOX1-211ENST00000524238 ARHGEF10O15013 1369 aa9.01□□□□□ -0.97
HMBOX1-211ENST00000524238 GADD45BO75293 160 aaPredicted RBP9.01□□□□□ -0.97
HMBOX1-211ENST00000524238 C8orf58Q8NAV2 365 aa9.01□□□□□ -0.97
HMBOX1-211ENST00000524238 FAM200AQ8TCP9 573 aa9.01□□□□□ -0.97
HMBOX1-211ENST00000524238 FUCA2Q9BTY2 467 aa9.01□□□□□ -0.97
HMBOX1-211ENST00000524238 LRRCC1Q9C099 1032 aa9.01□□□□□ -0.97
HMBOX1-211ENST00000524238 ANO2Q9NQ90 1003 aa9.01□□□□□ -0.97
HMBOX1-211ENST00000524238 POLKQ9UBT6 870 aa9.01□□□□□ -0.97
HMBOX1-211ENST00000524238 YTHDC2Q9H6S0 1430 aaKnown RBP9.01□□□□□ -0.97
HMBOX1-211ENST00000524238 MSH6P52701 1360 aa9.01□□□□□ -0.97
HMBOX1-211ENST00000524238 ELL2O00472 640 aaPredicted RBP9□□□□□ -0.97
HMBOX1-211ENST00000524238 STX6O43752 255 aa9□□□□□ -0.97
HMBOX1-211ENST00000524238 NEMFO60524 1076 aa9□□□□□ -0.97
HMBOX1-211ENST00000524238 F13A1P00488 732 aa9□□□□□ -0.97
HMBOX1-211ENST00000524238 CHMLP26374 656 aa9□□□□□ -0.97
HMBOX1-211ENST00000524238 ZSCAN31Q96LW9 406 aaPredicted RBP9□□□□□ -0.97
HMBOX1-211ENST00000524238 ZNF830Q96NB3 372 aaPredicted RBP9□□□□□ -0.97
HMBOX1-211ENST00000524238 STAP2Q9UGK3 403 aa9□□□□□ -0.97
HMBOX1-211ENST00000524238 CCDC171Q6TFL3 1326 aa9□□□□□ -0.97
HMBOX1-211ENST00000524238 MLH3Q9UHC1 1453 aa9□□□□□ -0.97
HMBOX1-211ENST00000524238 GNAI2P04899 355 aa9□□□□□ -0.97
HMBOX1-211ENST00000524238 GNAI3P08754 354 aa9□□□□□ -0.97
HMBOX1-211ENST00000524238 OTUD7AQ8TE49 926 aaPredicted RBP9□□□□□ -0.97
HMBOX1-211ENST00000524238 PHACTR3Q96KR7 559 aa9□□□□□ -0.97
HMBOX1-211ENST00000524238 TSPYL1Q9H0U9 437 aa9□□□□□ -0.97
HMBOX1-211ENST00000524238 SLC52A1Q9NWF4 448 aa9□□□□□ -0.97
HMBOX1-211ENST00000524238 SMC3Q9UQE7 1217 aa9□□□□□ -0.97
HMBOX1-211ENST00000524238 MORC2Q9Y6X9 1032 aaPredicted RBP9□□□□□ -0.97
HMBOX1-211ENST00000524238 SALL3Q9BXA9 1300 aa8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 KIF2AO00139 706 aaPredicted RBP8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 SMARCA5O60264 1052 aaPredicted RBP8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 CDK11BP21127 795 aaKnown RBP8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 U2AF2P26368 475 aaKnown RBP eCLIP8.99□□□□□ -0.975e-6■■■■□ 24.7
HMBOX1-211ENST00000524238 HSPA4P34932 840 aa8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 IL13P35225 146 aa8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 PLCB2Q00722 1185 aa8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 CCDC112Q8NEF3 446 aa8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 RTF1Q92541 710 aaKnown RBP8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 SH2B1Q9NRF2 756 aaPredicted RBP8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 CTNNA3Q9UI47 895 aa8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 DDX41Q9UJV9 622 aaKnown RBP8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 LIMCH1Q9UPQ0 1083 aa8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 EDC4Q6P2E9 1401 aaKnown RBP8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 ERCC6L2Q5T890 1561 aa8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 DLC1Q96QB1 1528 aa8.99□□□□□ -0.97
HMBOX1-211ENST00000524238 ITSN1Q15811 1721 aa8.98□□□□□ -0.97
HMBOX1-211ENST00000524238 SPDYE4A6NLX3 237 aa8.98□□□□□ -0.97
HMBOX1-211ENST00000524238 TRIM6-TRIM34B2RNG4 842 aa8.98□□□□□ -0.97
HMBOX1-211ENST00000524238 HMOX1P09601 288 aa8.98□□□□□ -0.97
HMBOX1-211ENST00000524238 NCBP1Q09161 790 aaKnown RBP8.98□□□□□ -0.97
HMBOX1-211ENST00000524238 MAP3K11Q16584 847 aa8.98□□□□□ -0.97
HMBOX1-211ENST00000524238 KRT222Q8N1A0 295 aa8.98□□□□□ -0.97
HMBOX1-211ENST00000524238 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.98□□□□□ -0.97
HMBOX1-211ENST00000524238 CALCOCO1Q9P1Z2 691 aa8.98□□□□□ -0.97
HMBOX1-211ENST00000524238 CNPY2Q9Y2B0 182 aa8.98□□□□□ -0.97
HMBOX1-211ENST00000524238 TCHHQ07283 1943 aa8.98□□□□□ -0.97
HMBOX1-211ENST00000524238 ELP1O95163 1332 aa8.98□□□□□ -0.97
HMBOX1-211ENST00000524238 CHL1O00533 1208 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 CDC25BP30305 580 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 DHX8Q14562 1220 aaKnown RBP8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 SLFNL1Q499Z3 407 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 ZNF397Q8NF99 534 aaPredicted RBP8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 BBXQ8WY36 941 aaPredicted RBP8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 TSC1Q92574 1164 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 MEIS3Q99687 375 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 KCNF1Q9H3M0 494 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 GDPD2Q9HCC8 539 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 SOS1Q07889 1333 aaPredicted RBP8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 CFAP65Q6ZU64 1925 aaKnown RBP8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 HTATSF1O43719 755 aaKnown RBP8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 TUBB4AP04350 444 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 TNNT1P13805 278 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 PDCP20941 246 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 SYT1P21579 422 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 KRT85P78386 507 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 SLC20A2Q08357 652 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 RILPL2Q969X0 211 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 CHAMP1Q96JM3 812 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 THUMPD2Q9BTF0 503 aaKnown RBP8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 CDK19Q9BWU1 502 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 NUP62CLQ9H1M0 184 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 DDX19AQ9NUU7 478 aaKnown RBP8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 PYCARDQ9ULZ3 195 aa8.97□□□□□ -0.97
HMBOX1-211ENST00000524238 NRKQ7Z2Y5 1582 aa8.96□□□□□ -0.97
HMBOX1-211ENST00000524238 RAD50Q92878 1312 aa8.96□□□□□ -0.97
HMBOX1-211ENST00000524238 APBB1O00213 710 aa8.96□□□□□ -0.98
HMBOX1-211ENST00000524238 RAB11FIP3O75154 756 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms