RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 VAMP4O75379 141 aa28.32■■■□□ 2.12
NKX6-3-202ENST00000524115 SF3B2Q13435 895 aaKnown RBP28.32■■■□□ 2.12
NKX6-3-202ENST00000524115 CSB-PGBD3P0DP91 1061 aa28.3■■■□□ 2.12
NKX6-3-202ENST00000524115 MRPL50Q8N5N7 158 aaKnown RBP28.3■■■□□ 2.12
NKX6-3-202ENST00000524115 OVOS2A0A0J9YW53 1432 aa28.3■■■□□ 2.12
NKX6-3-202ENST00000524115 OVOS2Q6IE36 1432 aa28.3■■■□□ 2.12
NKX6-3-202ENST00000524115 KIF24Q5T7B8 1368 aa28.3■■■□□ 2.12
NKX6-3-202ENST00000524115 DEFB132Q7Z7B7 95 aa28.29■■■□□ 2.12
NKX6-3-202ENST00000524115 COL18A1P39060 1754 aa28.28■■■□□ 2.12
NKX6-3-202ENST00000524115 API5Q9BZZ5 524 aaKnown RBP28.28■■■□□ 2.12
NKX6-3-202ENST00000524115 TBC1D32Q96NH3 1257 aa28.27■■■□□ 2.12
NKX6-3-202ENST00000524115 FBLN1P23142 703 aa28.26■■■□□ 2.12
NKX6-3-202ENST00000524115 CARD10Q9BWT7 1032 aa28.26■■■□□ 2.12
NKX6-3-202ENST00000524115 FAM196AQ6ZSG2 479 aa28.26■■■□□ 2.11
NKX6-3-202ENST00000524115 MBIPQ9NS73 344 aa28.26■■■□□ 2.11
NKX6-3-202ENST00000524115 GCC1Q96CN9 775 aa28.25■■■□□ 2.11
NKX6-3-202ENST00000524115 RRS1Q15050 365 aaKnown RBP28.24■■■□□ 2.11
NKX6-3-202ENST00000524115 USP54Q70EL1 1684 aa28.24■■■□□ 2.11
NKX6-3-202ENST00000524115 NFKBIBQ15653 356 aa28.23■■■□□ 2.11
NKX6-3-202ENST00000524115 TWISTNBQ3B726 338 aaPredicted RBP28.23■■■□□ 2.11
NKX6-3-202ENST00000524115 NUCB1Q02818 461 aa28.23■■■□□ 2.11
NKX6-3-202ENST00000524115 SEC24BO95487 1268 aa28.22■■■□□ 2.11
NKX6-3-202ENST00000524115 SLC4A3P48751 1232 aa28.22■■■□□ 2.11
NKX6-3-202ENST00000524115 ABCC4O15439 1325 aa28.21■■■□□ 2.11
NKX6-3-202ENST00000524115 ABCC6O95255 1503 aa28.21■■■□□ 2.11
NKX6-3-202ENST00000524115 EIF5BO60841 1220 aaKnown RBP28.2■■■□□ 2.11
NKX6-3-202ENST00000524115 ERBB3P21860 1342 aa28.2■■■□□ 2.1
NKX6-3-202ENST00000524115 ZBTB7BO15156 539 aaPredicted RBP28.19■■■□□ 2.1
NKX6-3-202ENST00000524115 BAG6P46379 1132 aa28.19■■■□□ 2.1
NKX6-3-202ENST00000524115 EIF4A2Q14240 407 aaKnown RBP28.19■■■□□ 2.1
NKX6-3-202ENST00000524115 IP6K1Q92551 441 aa28.19■■■□□ 2.1
NKX6-3-202ENST00000524115 CDCA7Q9BWT1 371 aaPredicted RBP28.19■■■□□ 2.1
NKX6-3-202ENST00000524115 DLG5Q8TDM6 1919 aa28.19■■■□□ 2.1
NKX6-3-202ENST00000524115 DDB1Q16531 1140 aa28.19■■■□□ 2.1
NKX6-3-202ENST00000524115 ANKRD24Q8TF21 1146 aa28.19■■■□□ 2.1
NKX6-3-202ENST00000524115 TRIM37O94972 964 aa28.18■■■□□ 2.1
NKX6-3-202ENST00000524115 NLRP2Q9NX02 1062 aa28.17■■■□□ 2.1
NKX6-3-202ENST00000524115 MAP3K19Q56UN5 1328 aa28.17■■■□□ 2.1
NKX6-3-202ENST00000524115 THUMPD2Q9BTF0 503 aaKnown RBP28.16■■■□□ 2.1
NKX6-3-202ENST00000524115 BCL11AQ9H165 835 aa28.16■■■□□ 2.1
NKX6-3-202ENST00000524115 CHD1LQ86WJ1 897 aa28.15■■■□□ 2.1
NKX6-3-202ENST00000524115 EN1Q05925 392 aaPredicted RBP28.14■■■□□ 2.1
NKX6-3-202ENST00000524115 SULT6B1Q6IMI4 303 aa28.14■■■□□ 2.1
NKX6-3-202ENST00000524115 TSPYL6Q8N831 410 aa28.14■■■□□ 2.1
NKX6-3-202ENST00000524115 RGPD1P0DJD0 1748 aa28.14■■■□□ 2.09
NKX6-3-202ENST00000524115 AMPHP49418 695 aa28.13■■■□□ 2.09
NKX6-3-202ENST00000524115 HOXC9P31274 260 aa28.12■■■□□ 2.09
NKX6-3-202ENST00000524115 LTV1Q96GA3 475 aaPredicted RBP28.12■■■□□ 2.09
NKX6-3-202ENST00000524115 DISP2A7MBM2 1401 aa28.11■■■□□ 2.09
NKX6-3-202ENST00000524115 CHL1O00533 1208 aa28.11■■■□□ 2.09
NKX6-3-202ENST00000524115 EXOC5O00471 708 aa28.1■■■□□ 2.09
NKX6-3-202ENST00000524115 C8orf58Q8NAV2 365 aa28.1■■■□□ 2.09
NKX6-3-202ENST00000524115 C22orf23Q9BZE7 217 aa28.1■■■□□ 2.09
NKX6-3-202ENST00000524115 FLT4P35916 1363 aa28.1■■■□□ 2.09
NKX6-3-202ENST00000524115 RGPD5Q99666 1765 aa28.1■■■□□ 2.09
NKX6-3-202ENST00000524115 APBA3O96018 575 aa28.1■■■□□ 2.09
NKX6-3-202ENST00000524115 MARCH10Q8NA82 808 aaPredicted RBP28.1■■■□□ 2.09
NKX6-3-202ENST00000524115 PARP4Q9UKK3 1724 aaKnown RBP28.09■■■□□ 2.09
NKX6-3-202ENST00000524115 BMP2KLQ5H9B9 411 aa28.09■■■□□ 2.09
NKX6-3-202ENST00000524115 PTPRCP08575 1304 aa28.08■■■□□ 2.08
NKX6-3-202ENST00000524115 INTS3Q68E01 1043 aaKnown RBP28.07■■■□□ 2.08
NKX6-3-202ENST00000524115 OVOS2A0A0G2JMS6 1433 aa28.07■■■□□ 2.08
NKX6-3-202ENST00000524115 GSE1Q14687 1217 aa28.07■■■□□ 2.08
NKX6-3-202ENST00000524115 PEAK1Q9H792 1746 aa28.06■■■□□ 2.08
NKX6-3-202ENST00000524115 IL2RBP14784 551 aa28.06■■■□□ 2.08
NKX6-3-202ENST00000524115 LTN1O94822 1766 aa28.05■■■□□ 2.08
NKX6-3-202ENST00000524115 HTATSF1O43719 755 aaKnown RBP28.05■■■□□ 2.08
NKX6-3-202ENST00000524115 EZH2Q15910 746 aaKnown RBP28.05■■■□□ 2.08
NKX6-3-202ENST00000524115 CAMKK2Q96RR4 588 aa28.05■■■□□ 2.08
NKX6-3-202ENST00000524115 RTL1A6NKG5 1358 aa28.04■■■□□ 2.08
NKX6-3-202ENST00000524115 ELL2O00472 640 aaPredicted RBP28.03■■■□□ 2.08
NKX6-3-202ENST00000524115 AEBP1Q8IUX7 1158 aa28.03■■■□□ 2.08
NKX6-3-202ENST00000524115 LRRC37A3O60309 1634 aa28.03■■■□□ 2.08
NKX6-3-202ENST00000524115 KDRP35968 1356 aa28.03■■■□□ 2.08
NKX6-3-202ENST00000524115 GAS2L2Q8NHY3 880 aa28.03■■■□□ 2.08
NKX6-3-202ENST00000524115 HSP90AB2PQ58FF8 381 aa28.02■■■□□ 2.08
NKX6-3-202ENST00000524115 ANKRD45Q5TZF3 282 aa28.02■■■□□ 2.08
NKX6-3-202ENST00000524115 TBC1D2Q9BYX2 928 aa28.02■■■□□ 2.08
NKX6-3-202ENST00000524115 LNPKQ9C0E8 428 aa28.02■■■□□ 2.08
NKX6-3-202ENST00000524115 MFAP1P55081 439 aaKnown RBP28.01■■■□□ 2.07
NKX6-3-202ENST00000524115 RTF1Q92541 710 aaKnown RBP28.01■■■□□ 2.07
NKX6-3-202ENST00000524115 RBM25P49756 843 aaKnown RBP28■■■□□ 2.07
NKX6-3-202ENST00000524115 DCTN1Q14203 1278 aa28■■■□□ 2.07
NKX6-3-202ENST00000524115 RPAP2Q8IXW5 612 aaPredicted RBP28■■■□□ 2.07
NKX6-3-202ENST00000524115 SOS1Q07889 1333 aaPredicted RBP28■■■□□ 2.07
NKX6-3-202ENST00000524115 BCL9O00512 1426 aa27.99■■■□□ 2.07
NKX6-3-202ENST00000524115 TNS2Q63HR2 1409 aa27.99■■■□□ 2.07
NKX6-3-202ENST00000524115 PTF1AQ7RTS3 328 aa27.98■■■□□ 2.07
NKX6-3-202ENST00000524115 BCL11BQ9C0K0 894 aaPredicted RBP27.98■■■□□ 2.07
NKX6-3-202ENST00000524115 ANTXR1Q9H6X2 564 aa27.97■■■□□ 2.07
NKX6-3-202ENST00000524115 IGSF1Q8N6C5 1336 aa27.97■■■□□ 2.07
NKX6-3-202ENST00000524115 SRCAPQ6ZRS2 3230 aa27.97■■■□□ 2.07
NKX6-3-202ENST00000524115 TNS1Q9HBL0 1735 aaKnown RBP27.97■■■□□ 2.07
NKX6-3-202ENST00000524115 NBPF6Q5VWK0 638 aa27.96■■■□□ 2.07
NKX6-3-202ENST00000524115 NBPF4Q96M43 638 aa27.96■■■□□ 2.07
NKX6-3-202ENST00000524115 FRAT2O75474 233 aaPredicted RBP27.95■■■□□ 2.07
NKX6-3-202ENST00000524115 HSCBQ8IWL3 235 aa27.95■■■□□ 2.07
NKX6-3-202ENST00000524115 DCTPP1Q9H773 170 aa27.95■■■□□ 2.07
NKX6-3-202ENST00000524115 BABAM1Q9NWV8 329 aa27.95■■■□□ 2.07
NKX6-3-202ENST00000524115 SNX21Q969T3 373 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms