RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 FAM83GA6ND36 823 aa8.12□□□□□ -1.11
PABPC1-223ENST00000523636 SMAPO00193 183 aa8.12□□□□□ -1.11
PABPC1-223ENST00000523636 TRIM37O94972 964 aa8.12□□□□□ -1.11
PABPC1-223ENST00000523636 BEGAINQ9BUH8 593 aa8.12□□□□□ -1.11
PABPC1-223ENST00000523636 RSPH6AQ9H0K4 717 aa8.12□□□□□ -1.11
PABPC1-223ENST00000523636 CASKIN1Q8WXD9 1431 aa8.12□□□□□ -1.11
PABPC1-223ENST00000523636 ATP10DQ9P241 1426 aa8.12□□□□□ -1.11
PABPC1-223ENST00000523636 CCNB3Q8WWL7 1395 aa8.11□□□□□ -1.11
PABPC1-223ENST00000523636 APBA3O96018 575 aa8.11□□□□□ -1.11
PABPC1-223ENST00000523636 DIXDC1Q155Q3 683 aa8.11□□□□□ -1.11
PABPC1-223ENST00000523636 WDR90Q96KV7 1748 aa8.11□□□□□ -1.11
PABPC1-223ENST00000523636 ABCA3Q99758 1704 aa8.11□□□□□ -1.11
PABPC1-223ENST00000523636 ZBTB7AO95365 584 aa8.1□□□□□ -1.11
PABPC1-223ENST00000523636 CD46P15529 392 aa8.1□□□□□ -1.11
PABPC1-223ENST00000523636 HDGFP51858 240 aaKnown RBP8.1□□□□□ -1.11
PABPC1-223ENST00000523636 SH3D19Q5HYK7 790 aa8.1□□□□□ -1.11
PABPC1-223ENST00000523636 ADGRD1Q6QNK2 874 aa8.1□□□□□ -1.11
PABPC1-223ENST00000523636 JMYQ8N9B5 988 aa8.1□□□□□ -1.11
PABPC1-223ENST00000523636 RSPH4AQ5TD94 716 aa8.09□□□□□ -1.11
PABPC1-223ENST00000523636 SEPT9Q9UHD8 586 aaPredicted RBP8.09□□□□□ -1.11
PABPC1-223ENST00000523636 ARHGEF5Q12774 1597 aa8.09□□□□□ -1.11
PABPC1-223ENST00000523636 ADGRL2O95490 1459 aa8.08□□□□□ -1.12
PABPC1-223ENST00000523636 HRO43593 1189 aa8.08□□□□□ -1.12
PABPC1-223ENST00000523636 SLC4A3P48751 1232 aa8.08□□□□□ -1.12
PABPC1-223ENST00000523636 NBPF8Q3BBV2 869 aa8.08□□□□□ -1.12
PABPC1-223ENST00000523636 NBPF14Q5TI25 921 aa8.08□□□□□ -1.12
PABPC1-223ENST00000523636 WWC3Q9ULE0 1092 aa8.08□□□□□ -1.12
PABPC1-223ENST00000523636 ADCY9O60503 1353 aa8.08□□□□□ -1.12
PABPC1-223ENST00000523636 MAP3K5Q99683 1374 aa8.08□□□□□ -1.12
PABPC1-223ENST00000523636 DDX11L8A8MPP1 907 aa8.07□□□□□ -1.12
PABPC1-223ENST00000523636 XPCQ01831 940 aaPredicted RBP8.07□□□□□ -1.12
PABPC1-223ENST00000523636 MMRN1Q13201 1228 aa8.07□□□□□ -1.12
PABPC1-223ENST00000523636 SKIV2LQ15477 1246 aaKnown RBP8.07□□□□□ -1.12
PABPC1-223ENST00000523636 SWT1Q5T5J6 900 aaKnown RBP8.07□□□□□ -1.12
PABPC1-223ENST00000523636 MRPL50Q8N5N7 158 aaKnown RBP8.07□□□□□ -1.12
PABPC1-223ENST00000523636 LMTK2Q8IWU2 1503 aa8.07□□□□□ -1.12
PABPC1-223ENST00000523636 RGPD3A6NKT7 1758 aaPredicted RBP8.07□□□□□ -1.12
PABPC1-223ENST00000523636 RGPD4Q7Z3J3 1758 aa8.07□□□□□ -1.12
PABPC1-223ENST00000523636 RPRD2Q5VT52 1461 aaKnown RBP8.06□□□□□ -1.12
PABPC1-223ENST00000523636 APLP1P51693 650 aa8.06□□□□□ -1.12
PABPC1-223ENST00000523636 HTRA3P83110 453 aa8.06□□□□□ -1.12
PABPC1-223ENST00000523636 SLF2Q8IX21 1173 aa8.06□□□□□ -1.12
PABPC1-223ENST00000523636 NEXMIFQ5QGS0 1516 aa8.06□□□□□ -1.12
PABPC1-223ENST00000523636 A0A0G2JS52 829 aa8.05□□□□□ -1.12
PABPC1-223ENST00000523636 EIF5BO60841 1220 aaKnown RBP8.05□□□□□ -1.12
PABPC1-223ENST00000523636 ZFRQ96KR1 1074 aaKnown RBP8.05□□□□□ -1.12
PABPC1-223ENST00000523636 PCMTD1Q96MG8 357 aaPredicted RBP8.05□□□□□ -1.12
PABPC1-223ENST00000523636 CCDC9Q9Y3X0 531 aaKnown RBP8.05□□□□□ -1.12
PABPC1-223ENST00000523636 KIAA1210Q9ULL0 1709 aa8.05□□□□□ -1.12
PABPC1-223ENST00000523636 METP08581 1390 aa8.05□□□□□ -1.12
PABPC1-223ENST00000523636 A0A0C4DFX4 3053 aa8.05□□□□□ -1.12
PABPC1-223ENST00000523636 GPR162Q16538 588 aa8.04□□□□□ -1.12
PABPC1-223ENST00000523636 RDH13Q8NBN7 331 aa8.04□□□□□ -1.12
PABPC1-223ENST00000523636 NECTIN2Q92692 538 aa8.04□□□□□ -1.12
PABPC1-223ENST00000523636 TBC1D2Q9BYX2 928 aa8.04□□□□□ -1.12
PABPC1-223ENST00000523636 PDE4DIPQ5VU43 2346 aa8.04□□□□□ -1.12
PABPC1-223ENST00000523636 GJA5P36382 358 aa8.03□□□□□ -1.12
PABPC1-223ENST00000523636 GCGRP47871 477 aa8.03□□□□□ -1.12
PABPC1-223ENST00000523636 TRIM26Q12899 539 aaPredicted RBP8.03□□□□□ -1.12
PABPC1-223ENST00000523636 MYSM1Q5VVJ2 828 aa8.03□□□□□ -1.12
PABPC1-223ENST00000523636 ANKRD13DQ6ZTN6 518 aa8.03□□□□□ -1.12
PABPC1-223ENST00000523636 SAMD7Q7Z3H4 446 aa8.03□□□□□ -1.12
PABPC1-223ENST00000523636 SPIRE2Q8WWL2 714 aa8.03□□□□□ -1.12
PABPC1-223ENST00000523636 KLRG1Q96E93 195 aa8.03□□□□□ -1.12
PABPC1-223ENST00000523636 STAC3Q96MF2 364 aa8.03□□□□□ -1.12
PABPC1-223ENST00000523636 SBF2Q86WG5 1849 aa8.02□□□□□ -1.13
PABPC1-223ENST00000523636 SLC10A3P09131 477 aa8.02□□□□□ -1.13
PABPC1-223ENST00000523636 YBX3P16989 372 aaKnown RBP eCLIP8.02□□□□□ -1.13
PABPC1-223ENST00000523636 USP46P62068 366 aa8.02□□□□□ -1.13
PABPC1-223ENST00000523636 TUSC1Q2TAM9 212 aa8.02□□□□□ -1.13
PABPC1-223ENST00000523636 NUTM1Q86Y26 1132 aa8.02□□□□□ -1.13
PABPC1-223ENST00000523636 CABLES1Q8TDN4 633 aa8.02□□□□□ -1.13
PABPC1-223ENST00000523636 ABCC5O15440 1437 aa8.02□□□□□ -1.13
PABPC1-223ENST00000523636 SPATA31A5Q5VU36 1347 aa8.02□□□□□ -1.13
PABPC1-223ENST00000523636 SPATA31A7Q8IWB4 1347 aa8.02□□□□□ -1.13
PABPC1-223ENST00000523636 FYCO1Q9BQS8 1478 aa8.01□□□□□ -1.13
PABPC1-223ENST00000523636 COL24A1Q17RW2 1714 aa8.01□□□□□ -1.13
PABPC1-223ENST00000523636 FAM196AQ6ZSG2 479 aa8.01□□□□□ -1.13
PABPC1-223ENST00000523636 SLC52A1Q9NWF4 448 aa8.01□□□□□ -1.13
PABPC1-223ENST00000523636 DUOX2Q9NRD8 1548 aa8.01□□□□□ -1.13
PABPC1-223ENST00000523636 SPATA31A3Q5VYP0 1347 aa8.01□□□□□ -1.13
PABPC1-223ENST00000523636 NPHP3Q7Z494 1330 aa8.01□□□□□ -1.13
PABPC1-223ENST00000523636 FOXO3O43524 673 aa8□□□□□ -1.13
PABPC1-223ENST00000523636 KDM4AO75164 1064 aa8□□□□□ -1.13
PABPC1-223ENST00000523636 CLK2P49760 499 aaKnown RBP8□□□□□ -1.13
PABPC1-223ENST00000523636 ZNF526Q8TF50 670 aaPredicted RBP8□□□□□ -1.13
PABPC1-223ENST00000523636 LRCH3Q96II8 777 aa8□□□□□ -1.13
PABPC1-223ENST00000523636 GOLGA8CPA6NN73 597 aa7.99□□□□□ -1.13
PABPC1-223ENST00000523636 SPTLC1O15269 473 aa7.99□□□□□ -1.13
PABPC1-223ENST00000523636 ANKK1Q8NFD2 765 aa7.99□□□□□ -1.13
PABPC1-223ENST00000523636 NLGN2Q8NFZ4 835 aa7.99□□□□□ -1.13
PABPC1-223ENST00000523636 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.99□□□□□ -1.13
PABPC1-223ENST00000523636 PEAK1Q9H792 1746 aa7.99□□□□□ -1.13
PABPC1-223ENST00000523636 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.99□□□□□ -1.13
PABPC1-223ENST00000523636 RSBN1LQ6PCB5 846 aaPredicted RBP7.98□□□□□ -1.13
PABPC1-223ENST00000523636 RIC3Q7Z5B4 369 aa7.98□□□□□ -1.13
PABPC1-223ENST00000523636 POLR3EQ9NVU0 708 aa7.98□□□□□ -1.13
PABPC1-223ENST00000523636 SOWAHBA6NEL2 793 aa7.97□□□□□ -1.13
PABPC1-223ENST00000523636 PTF1AQ7RTS3 328 aa7.97□□□□□ -1.13
PABPC1-223ENST00000523636 PRR14Q9BWN1 585 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms