RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 IP6K1Q92551 441 aa8.37□□□□□ -1.07
SHPRH-210ENST00000523276 TBC1D32Q96NH3 1257 aa8.37□□□□□ -1.07
SHPRH-210ENST00000523276 UPF2Q9HAU5 1272 aaKnown RBP8.37□□□□□ -1.07
SHPRH-210ENST00000523276 LRRC37A3O60309 1634 aa8.37□□□□□ -1.07
SHPRH-210ENST00000523276 GNAT3A8MTJ3 354 aa8.37□□□□□ -1.07
SHPRH-210ENST00000523276 PSME1Q06323 249 aa8.37□□□□□ -1.07
SHPRH-210ENST00000523276 MIS18AQ9NYP9 233 aa8.37□□□□□ -1.07
SHPRH-210ENST00000523276 MAP3K5Q99683 1374 aa8.37□□□□□ -1.07
SHPRH-210ENST00000523276 KCNH5Q8NCM2 988 aa8.36□□□□□ -1.07
SHPRH-210ENST00000523276 LTV1Q96GA3 475 aaPredicted RBP8.36□□□□□ -1.07
SHPRH-210ENST00000523276 LNPKQ9C0E8 428 aa8.36□□□□□ -1.07
SHPRH-210ENST00000523276 MSH6P52701 1360 aa8.36□□□□□ -1.07
SHPRH-210ENST00000523276 GTPBP6O43824 516 aaPredicted RBP8.36□□□□□ -1.07
SHPRH-210ENST00000523276 RTL5Q5HYW3 569 aaPredicted RBP8.36□□□□□ -1.07
SHPRH-210ENST00000523276 BABAM1Q9NWV8 329 aa8.36□□□□□ -1.07
SHPRH-210ENST00000523276 ANKRD45Q5TZF3 282 aa8.35□□□□□ -1.07
SHPRH-210ENST00000523276 SETD1BQ9UPS6 1966 aaKnown RBP8.34□□□□□ -1.07
SHPRH-210ENST00000523276 ATP10DQ9P241 1426 aa8.34□□□□□ -1.07
SHPRH-210ENST00000523276 SOS1Q07889 1333 aaPredicted RBP8.34□□□□□ -1.07
SHPRH-210ENST00000523276 USHBP1Q8N6Y0 703 aa8.34□□□□□ -1.07
SHPRH-210ENST00000523276 IL17REQ8NFR9 667 aa8.34□□□□□ -1.07
SHPRH-210ENST00000523276 RNF25Q96BH1 459 aaPredicted RBP8.34□□□□□ -1.07
SHPRH-210ENST00000523276 USP35Q9P2H5 1018 aa8.34□□□□□ -1.07
SHPRH-210ENST00000523276 PHRF1Q9P1Y6 1649 aaKnown RBP8.34□□□□□ -1.07
SHPRH-210ENST00000523276 SLIT3O75094 1523 aa8.34□□□□□ -1.07
SHPRH-210ENST00000523276 BECN1Q14457 450 aa8.34□□□□□ -1.07
SHPRH-210ENST00000523276 BMP2KLQ5H9B9 411 aa8.34□□□□□ -1.07
SHPRH-210ENST00000523276 NBPF6Q5VWK0 638 aa8.34□□□□□ -1.07
SHPRH-210ENST00000523276 ANKRD44Q8N8A2 993 aa8.34□□□□□ -1.07
SHPRH-210ENST00000523276 NBPF4Q96M43 638 aa8.34□□□□□ -1.07
SHPRH-210ENST00000523276 ORAI2Q96SN7 254 aa8.34□□□□□ -1.07
SHPRH-210ENST00000523276 TAF7Q15545 349 aaPredicted RBP8.33□□□□□ -1.08
SHPRH-210ENST00000523276 G2E3Q7L622 706 aa8.33□□□□□ -1.08
SHPRH-210ENST00000523276 PROSER2Q86WR7 435 aaPredicted RBP8.33□□□□□ -1.08
SHPRH-210ENST00000523276 DCTPP1Q9H773 170 aa8.33□□□□□ -1.08
SHPRH-210ENST00000523276 LTN1O94822 1766 aa8.33□□□□□ -1.08
SHPRH-210ENST00000523276 CEMIPQ8WUJ3 1361 aa8.33□□□□□ -1.08
SHPRH-210ENST00000523276 CCT4P50991 539 aaKnown RBP8.32□□□□□ -1.08
SHPRH-210ENST00000523276 CEP85Q6P2H3 762 aa8.32□□□□□ -1.08
SHPRH-210ENST00000523276 LMOD2Q6P5Q4 547 aa8.32□□□□□ -1.08
SHPRH-210ENST00000523276 ARHGEF25Q86VW2 580 aa8.32□□□□□ -1.08
SHPRH-210ENST00000523276 RPAP2Q8IXW5 612 aaPredicted RBP8.32□□□□□ -1.08
SHPRH-210ENST00000523276 STK31Q9BXU1 1019 aa8.32□□□□□ -1.08
SHPRH-210ENST00000523276 C22orf23Q9BZE7 217 aa8.32□□□□□ -1.08
SHPRH-210ENST00000523276 C1orf167Q5SNV9 1468 aa8.32□□□□□ -1.08
SHPRH-210ENST00000523276 NCAPD2Q15021 1401 aa8.32□□□□□ -1.08
SHPRH-210ENST00000523276 MED1Q15648 1581 aaPredicted RBP8.32□□□□□ -1.08
SHPRH-210ENST00000523276 GCP02774 474 aa8.32□□□□□ -1.08
SHPRH-210ENST00000523276 MFAP1P55081 439 aaKnown RBP8.32□□□□□ -1.08
SHPRH-210ENST00000523276 CCDC30Q5VVM6 783 aa8.32□□□□□ -1.08
SHPRH-210ENST00000523276 SP7Q8TDD2 431 aaPredicted RBP8.32□□□□□ -1.08
SHPRH-210ENST00000523276 MEIS3Q99687 375 aa8.32□□□□□ -1.08
SHPRH-210ENST00000523276 MST1RQ04912 1400 aa8.32□□□□□ -1.08
SHPRH-210ENST00000523276 ZBTB7CA1YPR0 619 aa8.31□□□□□ -1.08
SHPRH-210ENST00000523276 XPCQ01831 940 aaPredicted RBP8.31□□□□□ -1.08
SHPRH-210ENST00000523276 C19orf44Q9H6X5 657 aa8.31□□□□□ -1.08
SHPRH-210ENST00000523276 KIF1AQ12756 1690 aa8.31□□□□□ -1.08
SHPRH-210ENST00000523276 DEKP35659 375 aaKnown RBP8.3□□□□□ -1.08
SHPRH-210ENST00000523276 FLIIQ13045 1269 aa8.3□□□□□ -1.08
SHPRH-210ENST00000523276 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.3□□□□□ -1.08
SHPRH-210ENST00000523276 KRT28Q7Z3Y7 464 aa8.3□□□□□ -1.08
SHPRH-210ENST00000523276 TRPM3Q9HCF6 1732 aaPredicted RBP8.3□□□□□ -1.08
SHPRH-210ENST00000523276 FAM208AQ9UK61 1670 aaKnown RBP8.3□□□□□ -1.08
SHPRH-210ENST00000523276 F6X3S4 739 aa8.3□□□□□ -1.08
SHPRH-210ENST00000523276 NFKBIBQ15653 356 aa8.3□□□□□ -1.08
SHPRH-210ENST00000523276 SLC4A10Q6U841 1118 aa8.3□□□□□ -1.08
SHPRH-210ENST00000523276 LRRC59Q96AG4 307 aaKnown RBP8.3□□□□□ -1.08
SHPRH-210ENST00000523276 PLEKHO1Q53GL0 409 aaPredicted RBP8.29□□□□□ -1.08
SHPRH-210ENST00000523276 AKAP4Q5JQC9 854 aa8.29□□□□□ -1.08
SHPRH-210ENST00000523276 TBC1D2Q9BYX2 928 aa8.29□□□□□ -1.08
SHPRH-210ENST00000523276 PXDNLA1KZ92 1463 aa8.29□□□□□ -1.08
SHPRH-210ENST00000523276 DCCP43146 1447 aa8.29□□□□□ -1.08
SHPRH-210ENST00000523276 NCOA3Q9Y6Q9 1424 aa8.29□□□□□ -1.08
SHPRH-210ENST00000523276 HMMRO75330 724 aa8.29□□□□□ -1.08
SHPRH-210ENST00000523276 HOXB7P09629 217 aa8.29□□□□□ -1.08
SHPRH-210ENST00000523276 RBM25P49756 843 aaKnown RBP8.29□□□□□ -1.08
SHPRH-210ENST00000523276 FKBP5Q13451 457 aaPredicted RBP8.29□□□□□ -1.08
SHPRH-210ENST00000523276 AMOTQ4VCS5 1084 aa8.29□□□□□ -1.08
SHPRH-210ENST00000523276 ZNF530Q6P9A1 599 aaPredicted RBP8.29□□□□□ -1.08
SHPRH-210ENST00000523276 PLEKHM2Q8IWE5 1019 aa8.29□□□□□ -1.08
SHPRH-210ENST00000523276 ANKRD24Q8TF21 1146 aa8.29□□□□□ -1.08
SHPRH-210ENST00000523276 LGR6Q9HBX8 967 aa8.29□□□□□ -1.08
SHPRH-210ENST00000523276 CAMTA1Q9Y6Y1 1673 aa8.28□□□□□ -1.08
SHPRH-210ENST00000523276 OVOS2A0A0G2JMS6 1433 aa8.28□□□□□ -1.08
SHPRH-210ENST00000523276 GNAI2P04899 355 aa8.28□□□□□ -1.08
SHPRH-210ENST00000523276 GSPT1P15170 499 aaKnown RBP8.28□□□□□ -1.08
SHPRH-210ENST00000523276 EIF4A1P60842 406 aaKnown RBP8.28□□□□□ -1.08
SHPRH-210ENST00000523276 HDGFL1Q5TGJ6 251 aa8.28□□□□□ -1.08
SHPRH-210ENST00000523276 TBC1D9Q6ZT07 1266 aa8.28□□□□□ -1.08
SHPRH-210ENST00000523276 NECTIN2Q92692 538 aa8.28□□□□□ -1.08
SHPRH-210ENST00000523276 TMEM94Q12767 1356 aa8.28□□□□□ -1.08
SHPRH-210ENST00000523276 LMO7Q8WWI1 1683 aa8.28□□□□□ -1.08
SHPRH-210ENST00000523276 CDC45O75419 566 aa8.27□□□□□ -1.09
SHPRH-210ENST00000523276 GNAI3P08754 354 aa8.27□□□□□ -1.09
SHPRH-210ENST00000523276 ATF3P18847 181 aa8.27□□□□□ -1.09
SHPRH-210ENST00000523276 TTC22Q5TAA0 569 aa8.27□□□□□ -1.09
SHPRH-210ENST00000523276 PXDNQ92626 1479 aa8.27□□□□□ -1.09
SHPRH-210ENST00000523276 LMTK3Q96Q04 1460 aa8.27□□□□□ -1.09
SHPRH-210ENST00000523276 CD44P16070 742 aaKnown RBP8.27□□□□□ -1.09
SHPRH-210ENST00000523276 TEFQ10587 303 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 253 ms