RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 SMIM5Q71RC9 77 aa12.54□□□□□ -0.4
MRPS28-207ENST00000521434 PXDNLA1KZ92 1463 aa12.53□□□□□ -0.4
MRPS28-207ENST00000521434 BRCA1P38398 1863 aaKnown RBP12.53□□□□□ -0.4
MRPS28-207ENST00000521434 CYP27B1O15528 508 aa12.53□□□□□ -0.4
MRPS28-207ENST00000521434 LOC102724428A0A0B4J2F2 783 aa12.52□□□□□ -0.41
MRPS28-207ENST00000521434 SIK1P57059 783 aa12.52□□□□□ -0.41
MRPS28-207ENST00000521434 LINC00116Q8NCU8 138 aa12.52□□□□□ -0.41
MRPS28-207ENST00000521434 PIGBQ92521 554 aa12.52□□□□□ -0.41
MRPS28-207ENST00000521434 NMRK2Q9NPI5 230 aa12.52□□□□□ -0.41
MRPS28-207ENST00000521434 ZBTB12Q9Y330 459 aaPredicted RBP12.52□□□□□ -0.41
MRPS28-207ENST00000521434 ARFGEF1Q9Y6D6 1849 aa12.51□□□□□ -0.41
MRPS28-207ENST00000521434 GNPATO15228 680 aa12.51□□□□□ -0.41
MRPS28-207ENST00000521434 MMP10P09238 476 aa12.51□□□□□ -0.41
MRPS28-207ENST00000521434 TGFB2P61812 414 aa12.51□□□□□ -0.41
MRPS28-207ENST00000521434 COL13A1Q5TAT6 717 aaPredicted RBP12.51□□□□□ -0.41
MRPS28-207ENST00000521434 RBM46Q8TBY0 533 aaKnown RBP12.51□□□□□ -0.41
MRPS28-207ENST00000521434 KLRG1Q96E93 195 aa12.51□□□□□ -0.41
MRPS28-207ENST00000521434 BCS1LQ9Y276 419 aa12.51□□□□□ -0.41
MRPS28-207ENST00000521434 INSRP06213 1382 aa12.51□□□□□ -0.41
MRPS28-207ENST00000521434 HSP90AB2PQ58FF8 381 aa12.5□□□□□ -0.41
MRPS28-207ENST00000521434 ARHGAP27Q6ZUM4 889 aa12.5□□□□□ -0.41
MRPS28-207ENST00000521434 JMYQ8N9B5 988 aa12.5□□□□□ -0.41
MRPS28-207ENST00000521434 KIF20BQ96Q89 1820 aa12.49□□□□□ -0.41
MRPS28-207ENST00000521434 FLT4P35916 1363 aa12.49□□□□□ -0.41
MRPS28-207ENST00000521434 KIF24Q5T7B8 1368 aa12.49□□□□□ -0.41
MRPS28-207ENST00000521434 A0A0G2JLW4 131 aa12.49□□□□□ -0.41
MRPS28-207ENST00000521434 FYB1O15117 783 aa12.49□□□□□ -0.41
MRPS28-207ENST00000521434 NKX1-1Q15270 411 aaPredicted RBP12.49□□□□□ -0.41
MRPS28-207ENST00000521434 C16orf71Q8IYS4 520 aaPredicted RBP12.49□□□□□ -0.41
MRPS28-207ENST00000521434 GGNBP2Q9H3C7 697 aa12.49□□□□□ -0.41
MRPS28-207ENST00000521434 C10orf71Q711Q0 1435 aa12.48□□□□□ -0.41
MRPS28-207ENST00000521434 PLEKHG2Q9H7P9 1386 aa12.48□□□□□ -0.41
MRPS28-207ENST00000521434 FSTL1Q12841 308 aa12.48□□□□□ -0.41
MRPS28-207ENST00000521434 ITPK1Q13572 414 aa12.48□□□□□ -0.41
MRPS28-207ENST00000521434 TESK2Q96S53 571 aa12.48□□□□□ -0.41
MRPS28-207ENST00000521434 C4AP0C0L4 1744 aa12.48□□□□□ -0.41
MRPS28-207ENST00000521434 SBF1O95248 1867 aa12.47□□□□□ -0.41
MRPS28-207ENST00000521434 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
MRPS28-207ENST00000521434 FCHSD2O94868 740 aa12.47□□□□□ -0.41
MRPS28-207ENST00000521434 ATP6V1AP38606 617 aa12.47□□□□□ -0.41
MRPS28-207ENST00000521434 HTRA3P83110 453 aa12.47□□□□□ -0.41
MRPS28-207ENST00000521434 NLGN1Q8N2Q7 840 aa12.47□□□□□ -0.41
MRPS28-207ENST00000521434 TMOD3Q9NYL9 352 aa12.47□□□□□ -0.41
MRPS28-207ENST00000521434 ASAP1Q9ULH1 1129 aa12.47□□□□□ -0.41
MRPS28-207ENST00000521434 SPG7Q9UQ90 795 aa12.47□□□□□ -0.41
MRPS28-207ENST00000521434 TNRC6CQ9HCJ0 1690 aaKnown RBP12.46□□□□□ -0.41
MRPS28-207ENST00000521434 DPEP1P16444 411 aa12.46□□□□□ -0.41
MRPS28-207ENST00000521434 TMF1P82094 1093 aa12.46□□□□□ -0.41
MRPS28-207ENST00000521434 C9orf131Q5VYM1 1079 aa12.46□□□□□ -0.41
MRPS28-207ENST00000521434 TNS4Q8IZW8 715 aa12.46□□□□□ -0.41
MRPS28-207ENST00000521434 CCDC87Q9NVE4 849 aa12.46□□□□□ -0.41
MRPS28-207ENST00000521434 NCAPD2Q15021 1401 aa12.45□□□□□ -0.42
MRPS28-207ENST00000521434 ZNF831Q5JPB2 1677 aa12.45□□□□□ -0.42
MRPS28-207ENST00000521434 KDM2BQ8NHM5 1336 aa12.45□□□□□ -0.42
MRPS28-207ENST00000521434 ST20-MTHFSA0A0A6YYL1 179 aa12.45□□□□□ -0.42
MRPS28-207ENST00000521434 PRELPP51888 382 aa12.45□□□□□ -0.42
MRPS28-207ENST00000521434 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
MRPS28-207ENST00000521434 TRAPPC3LQ5T215 181 aa12.45□□□□□ -0.42
MRPS28-207ENST00000521434 RTCBQ9Y3I0 505 aaKnown RBP12.45□□□□□ -0.42
MRPS28-207ENST00000521434 KCPQ6ZWJ8 1503 aa12.44□□□□□ -0.42
MRPS28-207ENST00000521434 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.44□□□□□ -0.42
MRPS28-207ENST00000521434 COL5A3P25940 1745 aaPredicted RBP12.44□□□□□ -0.42
MRPS28-207ENST00000521434 MYH14Q7Z406 1995 aaKnown RBP12.43□□□□□ -0.42
MRPS28-207ENST00000521434 ANKRD26Q9UPS8 1709 aa12.43□□□□□ -0.42
MRPS28-207ENST00000521434 KCNA3P22001 575 aa12.43□□□□□ -0.42
MRPS28-207ENST00000521434 ATG3Q9NT62 314 aa12.43□□□□□ -0.42
MRPS28-207ENST00000521434 PARP3Q9Y6F1 533 aa12.43□□□□□ -0.42
MRPS28-207ENST00000521434 GYS1P13807 737 aa12.42□□□□□ -0.42
MRPS28-207ENST00000521434 ARHGEF1Q92888 912 aaKnown RBP12.42□□□□□ -0.42
MRPS28-207ENST00000521434 KDRP35968 1356 aa12.42□□□□□ -0.42
MRPS28-207ENST00000521434 TONSLQ96HA7 1378 aa12.42□□□□□ -0.42
MRPS28-207ENST00000521434 PHKG2P15735 406 aa12.41□□□□□ -0.42
MRPS28-207ENST00000521434 RFC4P35249 363 aa12.41□□□□□ -0.42
MRPS28-207ENST00000521434 RC3H1Q5TC82 1133 aaKnown RBP12.41□□□□□ -0.42
MRPS28-207ENST00000521434 IFNL2Q8IZJ0 200 aa12.41□□□□□ -0.42
MRPS28-207ENST00000521434 DCAF5Q96JK2 942 aa12.41□□□□□ -0.42
MRPS28-207ENST00000521434 RRAGCQ9HB90 399 aa12.41□□□□□ -0.42
MRPS28-207ENST00000521434 RNF181Q9P0P0 153 aa12.41□□□□□ -0.42
MRPS28-207ENST00000521434 PIM2Q9P1W9 311 aa12.41□□□□□ -0.42
MRPS28-207ENST00000521434 EMILIN1Q9Y6C2 1016 aa12.41□□□□□ -0.42
MRPS28-207ENST00000521434 CNTNAP4Q9C0A0 1308 aa12.4□□□□□ -0.42
MRPS28-207ENST00000521434 DALRD3Q5D0E6 543 aaKnown RBP12.4□□□□□ -0.42
MRPS28-207ENST00000521434 SMC1BQ8NDV3 1235 aa12.4□□□□□ -0.42
MRPS28-207ENST00000521434 PPM1GO15355 546 aaPredicted RBP12.39□□□□□ -0.43
MRPS28-207ENST00000521434 RPS6KA4O75676 772 aa12.39□□□□□ -0.43
MRPS28-207ENST00000521434 SLC4A9Q96Q91 983 aa12.39□□□□□ -0.43
MRPS28-207ENST00000521434 EYA1Q99502 592 aa12.39□□□□□ -0.43
MRPS28-207ENST00000521434 RBM42Q9BTD8 480 aaKnown RBP12.39□□□□□ -0.43
MRPS28-207ENST00000521434 CCDC88AQ3V6T2 1871 aa12.39□□□□□ -0.43
MRPS28-207ENST00000521434 WASHC2AQ641Q2 1341 aa12.38□□□□□ -0.43
MRPS28-207ENST00000521434 ERVV-2B6SEH9 535 aa12.37□□□□□ -0.43
MRPS28-207ENST00000521434 HSPA1AP0DMV8 641 aaKnown RBP12.37□□□□□ -0.43
MRPS28-207ENST00000521434 HSPA1BP0DMV9 641 aaKnown RBP12.37□□□□□ -0.43
MRPS28-207ENST00000521434 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
MRPS28-207ENST00000521434 CHRNA5P30532 468 aa12.35□□□□□ -0.43
MRPS28-207ENST00000521434 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
MRPS28-207ENST00000521434 VEGFAP15692 232 aaPredicted RBP12.34□□□□□ -0.43
MRPS28-207ENST00000521434 DDR1Q08345 913 aa12.34□□□□□ -0.43
MRPS28-207ENST00000521434 FKBP8Q14318 412 aa12.34□□□□□ -0.43
MRPS28-207ENST00000521434 CDCA8Q53HL2 280 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms