RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 TEFQ10587 303 aa16.49■□□□□ 0.23
HDAC2-211ENST00000521233 NUP188Q5SRE5 1749 aa16.49■□□□□ 0.23
HDAC2-211ENST00000521233 PIGBQ92521 554 aa16.49■□□□□ 0.23
HDAC2-211ENST00000521233 DLG5Q8TDM6 1919 aa16.49■□□□□ 0.23
HDAC2-211ENST00000521233 CCDC146Q8IYE0 955 aa16.48■□□□□ 0.23
HDAC2-211ENST00000521233 PAPPAQ13219 1627 aa16.48■□□□□ 0.23
HDAC2-211ENST00000521233 EZH2Q15910 746 aaKnown RBP16.47■□□□□ 0.23
HDAC2-211ENST00000521233 SLC27A3Q5K4L6 730 aa16.47■□□□□ 0.23
HDAC2-211ENST00000521233 LGR6Q9HBX8 967 aa16.47■□□□□ 0.23
HDAC2-211ENST00000521233 SIPA1L3O60292 1781 aaPredicted RBP16.46■□□□□ 0.23
HDAC2-211ENST00000521233 TMPOP42166 694 aaKnown RBP16.46■□□□□ 0.23
HDAC2-211ENST00000521233 TXNRD1Q16881 649 aa16.46■□□□□ 0.23
HDAC2-211ENST00000521233 RIPK4P57078 832 aa16.45■□□□□ 0.22
HDAC2-211ENST00000521233 NFATC2IPQ8NCF5 419 aa16.45■□□□□ 0.22
HDAC2-211ENST00000521233 IL17REQ8NFR9 667 aa16.45■□□□□ 0.22
HDAC2-211ENST00000521233 ZNF831Q5JPB2 1677 aa16.45■□□□□ 0.22
HDAC2-211ENST00000521233 CICQ96RK0 1608 aaPredicted RBP16.44■□□□□ 0.22
HDAC2-211ENST00000521233 MCM10Q7L590 875 aa16.43■□□□□ 0.22
HDAC2-211ENST00000521233 ATG3Q9NT62 314 aa16.43■□□□□ 0.22
HDAC2-211ENST00000521233 CCNL1Q9UK58 526 aaPredicted RBP16.43■□□□□ 0.22
HDAC2-211ENST00000521233 ASAP1Q9ULH1 1129 aa16.43■□□□□ 0.22
HDAC2-211ENST00000521233 NBPF14Q5TI25 921 aa16.42■□□□□ 0.22
HDAC2-211ENST00000521233 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
HDAC2-211ENST00000521233 TTC5Q8N0Z6 440 aa16.42■□□□□ 0.22
HDAC2-211ENST00000521233 C5P01031 1676 aa16.42■□□□□ 0.22
HDAC2-211ENST00000521233 UBR2Q8IWV8 1755 aa16.41■□□□□ 0.22
HDAC2-211ENST00000521233 APAF1O14727 1248 aa16.41■□□□□ 0.22
HDAC2-211ENST00000521233 RRP7AQ9Y3A4 280 aaKnown RBP16.41■□□□□ 0.22
HDAC2-211ENST00000521233 LOC102724428A0A0B4J2F2 783 aa16.4■□□□□ 0.22
HDAC2-211ENST00000521233 SIK1P57059 783 aa16.4■□□□□ 0.22
HDAC2-211ENST00000521233 MAPK8IP2Q13387 824 aaPredicted RBP16.4■□□□□ 0.22
HDAC2-211ENST00000521233 DCTN1Q14203 1278 aa16.4■□□□□ 0.22
HDAC2-211ENST00000521233 NEUROD2Q15784 382 aa16.4■□□□□ 0.22
HDAC2-211ENST00000521233 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
HDAC2-211ENST00000521233 MIER1Q8N108 512 aa16.4■□□□□ 0.22
HDAC2-211ENST00000521233 PROM2Q8N271 834 aa16.4■□□□□ 0.22
HDAC2-211ENST00000521233 NGEFQ8N5V2 710 aa16.4■□□□□ 0.22
HDAC2-211ENST00000521233 KCPQ6ZWJ8 1503 aa16.4■□□□□ 0.22
HDAC2-211ENST00000521233 BTBD11A6QL63 1104 aa16.39■□□□□ 0.21
HDAC2-211ENST00000521233 CALD1Q05682 793 aaKnown RBP16.39■□□□□ 0.21
HDAC2-211ENST00000521233 TAF1LQ8IZX4 1826 aa16.38■□□□□ 0.21
HDAC2-211ENST00000521233 TAF7Q15545 349 aaPredicted RBP16.38■□□□□ 0.21
HDAC2-211ENST00000521233 ZNF790Q6PG37 636 aa16.38■□□□□ 0.21
HDAC2-211ENST00000521233 RBM42Q9BTD8 480 aaKnown RBP16.38■□□□□ 0.21
HDAC2-211ENST00000521233 STK32BQ9NY57 414 aa16.38■□□□□ 0.21
HDAC2-211ENST00000521233 KDM3BQ7LBC6 1761 aa16.38■□□□□ 0.21
HDAC2-211ENST00000521233 LRRC4BQ9NT99 713 aa16.37■□□□□ 0.21
HDAC2-211ENST00000521233 BABAM1Q9NWV8 329 aa16.37■□□□□ 0.21
HDAC2-211ENST00000521233 C4BP0C0L5 1744 aa16.36■□□□□ 0.21
HDAC2-211ENST00000521233 COL5A3P25940 1745 aaPredicted RBP16.36■□□□□ 0.21
HDAC2-211ENST00000521233 TJP1Q07157 1748 aa16.36■□□□□ 0.21
HDAC2-211ENST00000521233 PTCD1O75127 700 aaKnown RBP16.36■□□□□ 0.21
HDAC2-211ENST00000521233 ATP6V1AP38606 617 aa16.36■□□□□ 0.21
HDAC2-211ENST00000521233 SLC39A6Q13433 755 aa16.36■□□□□ 0.21
HDAC2-211ENST00000521233 CCDC27Q2M243 656 aa16.36■□□□□ 0.21
HDAC2-211ENST00000521233 VSIG10Q8N0Z9 540 aa16.36■□□□□ 0.21
HDAC2-211ENST00000521233 THUMPD2Q9BTF0 503 aaKnown RBP16.36■□□□□ 0.21
HDAC2-211ENST00000521233 TRIM35Q9UPQ4 493 aa16.36■□□□□ 0.21
HDAC2-211ENST00000521233 FMNL2Q96PY5 1086 aa16.35■□□□□ 0.21
HDAC2-211ENST00000521233 ANO8Q9HCE9 1232 aaPredicted RBP16.35■□□□□ 0.21
HDAC2-211ENST00000521233 QSER1Q2KHR3 1735 aa16.35■□□□□ 0.21
HDAC2-211ENST00000521233 HEG1Q9ULI3 1381 aa16.34■□□□□ 0.21
HDAC2-211ENST00000521233 SLC15A2Q16348 729 aa16.33■□□□□ 0.2
HDAC2-211ENST00000521233 AKT1S1Q96B36 256 aa16.33■□□□□ 0.2
HDAC2-211ENST00000521233 ZNF496Q96IT1 587 aaPredicted RBP16.33■□□□□ 0.2
HDAC2-211ENST00000521233 AK7Q96M32 723 aa16.33■□□□□ 0.2
HDAC2-211ENST00000521233 TEX13AQ9BXU3 409 aaPredicted RBP16.33■□□□□ 0.2
HDAC2-211ENST00000521233 TSPYL4Q9UJ04 414 aa16.33■□□□□ 0.2
HDAC2-211ENST00000521233 CNTNAP4Q9C0A0 1308 aa16.33■□□□□ 0.2
HDAC2-211ENST00000521233 KCNQ4P56696 695 aa16.32■□□□□ 0.2
HDAC2-211ENST00000521233 ITPK1Q13572 414 aa16.32■□□□□ 0.2
HDAC2-211ENST00000521233 PPP4R3CPQ6ZMV5 832 aa16.32■□□□□ 0.2
HDAC2-211ENST00000521233 SLC4A9Q96Q91 983 aa16.32■□□□□ 0.2
HDAC2-211ENST00000521233 GNAI1P63096 354 aa16.31■□□□□ 0.2
HDAC2-211ENST00000521233 R3HDM1Q15032 1099 aaKnown RBP16.31■□□□□ 0.2
HDAC2-211ENST00000521233 ZNF827Q17R98 1081 aa16.31■□□□□ 0.2
HDAC2-211ENST00000521233 LINC00116Q8NCU8 138 aa16.31■□□□□ 0.2
HDAC2-211ENST00000521233 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
HDAC2-211ENST00000521233 LAMB4A4D0S4 1761 aa16.31■□□□□ 0.2
HDAC2-211ENST00000521233 IL16Q14005 1332 aa16.3■□□□□ 0.2
HDAC2-211ENST00000521233 RC3H1Q5TC82 1133 aaKnown RBP16.3■□□□□ 0.2
HDAC2-211ENST00000521233 WWC1Q8IX03 1113 aa16.3■□□□□ 0.2
HDAC2-211ENST00000521233 FLAD1Q8NFF5 587 aa16.3■□□□□ 0.2
HDAC2-211ENST00000521233 CFAP44Q96MT7 982 aa16.3■□□□□ 0.2
HDAC2-211ENST00000521233 TFCP2L1Q9NZI6 479 aa16.3■□□□□ 0.2
HDAC2-211ENST00000521233 TUBGCP6Q96RT7 1819 aa16.3■□□□□ 0.2
HDAC2-211ENST00000521233 CHL1O00533 1208 aa16.29■□□□□ 0.2
HDAC2-211ENST00000521233 STARD3NLO95772 234 aa16.29■□□□□ 0.2
HDAC2-211ENST00000521233 SNRPA1P09661 255 aaKnown RBP16.29■□□□□ 0.2
HDAC2-211ENST00000521233 DNAJC10Q8IXB1 793 aa16.29■□□□□ 0.2
HDAC2-211ENST00000521233 UBR3Q6ZT12 1888 aa16.29■□□□□ 0.2
HDAC2-211ENST00000521233 CASZ1Q86V15 1759 aa16.28■□□□□ 0.2
HDAC2-211ENST00000521233 PSDA5PKW4 1024 aaPredicted RBP16.28■□□□□ 0.2
HDAC2-211ENST00000521233 KCNQ3O43525 872 aa16.28■□□□□ 0.2
HDAC2-211ENST00000521233 SSFA2P28290 1259 aa16.28■□□□□ 0.2
HDAC2-211ENST00000521233 MIS18AQ9NYP9 233 aa16.28■□□□□ 0.2
HDAC2-211ENST00000521233 LAS1LQ9Y4W2 734 aaKnown RBP16.28■□□□□ 0.2
HDAC2-211ENST00000521233 GNPATO15228 680 aa16.27■□□□□ 0.2
HDAC2-211ENST00000521233 CRKLP46109 303 aaKnown RBP16.27■□□□□ 0.2
HDAC2-211ENST00000521233 EIF4A1P60842 406 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms