RNA–Protein interactions for RNA: ENST00000519509.5

CCDC25-204, Transcript of coiled-coil domain containing 25, humanhuman

TSL 2

Gene CCDC25, Length 977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-204ENST00000519509 SPDYE4A6NLX3 237 aa13.46□□□□□ -0.25
CCDC25-204ENST00000519509 PRELPP51888 382 aa13.46□□□□□ -0.25
CCDC25-204ENST00000519509 C4AP0C0L4 1744 aa13.46□□□□□ -0.25
CCDC25-204ENST00000519509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.45□□□□□ -0.26
CCDC25-204ENST00000519509 PHF14O94880 888 aa13.45□□□□□ -0.26
CCDC25-204ENST00000519509 NBPF6Q5VWK0 638 aa13.45□□□□□ -0.26
CCDC25-204ENST00000519509 NBPF4Q96M43 638 aa13.45□□□□□ -0.26
CCDC25-204ENST00000519509 ZNF831Q5JPB2 1677 aa13.44□□□□□ -0.26
CCDC25-204ENST00000519509 HDGFL2Q7Z4V5 671 aaPredicted RBP13.44□□□□□ -0.26
CCDC25-204ENST00000519509 USHBP1Q8N6Y0 703 aa13.44□□□□□ -0.26
CCDC25-204ENST00000519509 RBM46Q8TBY0 533 aaKnown RBP13.44□□□□□ -0.26
CCDC25-204ENST00000519509 AK7Q96M32 723 aa13.44□□□□□ -0.26
CCDC25-204ENST00000519509 C10orf71Q711Q0 1435 aa13.43□□□□□ -0.26
CCDC25-204ENST00000519509 TNS4Q8IZW8 715 aa13.43□□□□□ -0.26
CCDC25-204ENST00000519509 TMC1Q8TDI8 760 aa13.43□□□□□ -0.26
CCDC25-204ENST00000519509 CGNL1Q0VF96 1302 aa13.42□□□□□ -0.26
CCDC25-204ENST00000519509 NSD3Q9BZ95 1437 aa13.42□□□□□ -0.26
CCDC25-204ENST00000519509 SSFA2P28290 1259 aa13.42□□□□□ -0.26
CCDC25-204ENST00000519509 MPRIPQ6WCQ1 1025 aa13.42□□□□□ -0.26
CCDC25-204ENST00000519509 LINC00116Q8NCU8 138 aa13.42□□□□□ -0.26
CCDC25-204ENST00000519509 KCPQ6ZWJ8 1503 aa13.41□□□□□ -0.26
CCDC25-204ENST00000519509 CYP27B1O15528 508 aa13.41□□□□□ -0.26
CCDC25-204ENST00000519509 TNRC6CQ9HCJ0 1690 aaKnown RBP13.4□□□□□ -0.26
CCDC25-204ENST00000519509 PCDH11XQ9BZA7 1347 aa13.4□□□□□ -0.26
CCDC25-204ENST00000519509 PCDH11YQ9BZA8 1340 aa13.4□□□□□ -0.26
CCDC25-204ENST00000519509 AMPHP49418 695 aa13.4□□□□□ -0.26
CCDC25-204ENST00000519509 BCS1LQ9Y276 419 aa13.4□□□□□ -0.26
CCDC25-204ENST00000519509 ADAMTS7Q9UKP4 1686 aa13.4□□□□□ -0.26
CCDC25-204ENST00000519509 SBF1O95248 1867 aa13.4□□□□□ -0.26
CCDC25-204ENST00000519509 MMP10P09238 476 aa13.39□□□□□ -0.27
CCDC25-204ENST00000519509 HMGB2P26583 209 aaKnown RBP13.39□□□□□ -0.27
CCDC25-204ENST00000519509 FSTL1Q12841 308 aa13.39□□□□□ -0.27
CCDC25-204ENST00000519509 PIGBQ92521 554 aa13.39□□□□□ -0.27
CCDC25-204ENST00000519509 SMARCC1Q92922 1105 aaPredicted RBP13.39□□□□□ -0.27
CCDC25-204ENST00000519509 SIN3AQ96ST3 1273 aa13.39□□□□□ -0.27
CCDC25-204ENST00000519509 TERF2IPQ9NYB0 399 aa13.39□□□□□ -0.27
CCDC25-204ENST00000519509 KDRP35968 1356 aa13.39□□□□□ -0.27
CCDC25-204ENST00000519509 PLEKHG2Q9H7P9 1386 aa13.38□□□□□ -0.27
CCDC25-204ENST00000519509 A0A0G2JLW4 131 aa13.38□□□□□ -0.27
CCDC25-204ENST00000519509 TGFB2P61812 414 aa13.38□□□□□ -0.27
CCDC25-204ENST00000519509 ITPK1Q13572 414 aa13.38□□□□□ -0.27
CCDC25-204ENST00000519509 RRS1Q15050 365 aaKnown RBP13.38□□□□□ -0.27
CCDC25-204ENST00000519509 ARHGAP27Q6ZUM4 889 aa13.38□□□□□ -0.27
CCDC25-204ENST00000519509 RAPGEF4Q8WZA2 1011 aa13.38□□□□□ -0.27
CCDC25-204ENST00000519509 COG3Q96JB2 828 aa13.38□□□□□ -0.27
CCDC25-204ENST00000519509 MYH14Q7Z406 1995 aaKnown RBP13.38□□□□□ -0.27
CCDC25-204ENST00000519509 LOC102724428A0A0B4J2F2 783 aa13.37□□□□□ -0.27
CCDC25-204ENST00000519509 TATP17735 454 aaPredicted RBP13.37□□□□□ -0.27
CCDC25-204ENST00000519509 SIK1P57059 783 aa13.37□□□□□ -0.27
CCDC25-204ENST00000519509 C9orf131Q5VYM1 1079 aa13.37□□□□□ -0.27
CCDC25-204ENST00000519509 PUS7Q96PZ0 661 aaKnown RBP13.37□□□□□ -0.27
CCDC25-204ENST00000519509 GNPATO15228 680 aa13.36□□□□□ -0.27
CCDC25-204ENST00000519509 DPEP1P16444 411 aa13.36□□□□□ -0.27
CCDC25-204ENST00000519509 TESK2Q96S53 571 aa13.36□□□□□ -0.27
CCDC25-204ENST00000519509 INSRP06213 1382 aa13.35□□□□□ -0.27
CCDC25-204ENST00000519509 KCNA3P22001 575 aa13.35□□□□□ -0.27
CCDC25-204ENST00000519509 TJP1Q07157 1748 aa13.34□□□□□ -0.27
CCDC25-204ENST00000519509 SMG6Q86US8 1419 aaKnown RBP13.34□□□□□ -0.27
CCDC25-204ENST00000519509 FCHSD2O94868 740 aa13.34□□□□□ -0.27
CCDC25-204ENST00000519509 HSPA1AP0DMV8 641 aaKnown RBP13.34□□□□□ -0.27
CCDC25-204ENST00000519509 HSPA1BP0DMV9 641 aaKnown RBP13.34□□□□□ -0.27
CCDC25-204ENST00000519509 NKX1-1Q15270 411 aaPredicted RBP13.34□□□□□ -0.27
CCDC25-204ENST00000519509 C16orf71Q8IYS4 520 aaPredicted RBP13.34□□□□□ -0.27
CCDC25-204ENST00000519509 DLEC1Q9Y238 1755 aa13.34□□□□□ -0.27
CCDC25-204ENST00000519509 HSP90AB2PQ58FF8 381 aa13.33□□□□□ -0.28
CCDC25-204ENST00000519509 RRAGCQ9HB90 399 aa13.33□□□□□ -0.28
CCDC25-204ENST00000519509 ASAP1Q9ULH1 1129 aa13.33□□□□□ -0.28
CCDC25-204ENST00000519509 TIAM2Q8IVF5 1701 aa13.33□□□□□ -0.28
CCDC25-204ENST00000519509 FLT4P35916 1363 aa13.32□□□□□ -0.28
CCDC25-204ENST00000519509 KIF24Q5T7B8 1368 aa13.32□□□□□ -0.28
CCDC25-204ENST00000519509 DCAF5Q96JK2 942 aa13.32□□□□□ -0.28
CCDC25-204ENST00000519509 SLC34A2O95436 690 aa13.31□□□□□ -0.28
CCDC25-204ENST00000519509 KDM2BQ8NHM5 1336 aa13.31□□□□□ -0.28
CCDC25-204ENST00000519509 NRXN2Q9P2S2 1712 aa13.3□□□□□ -0.28
CCDC25-204ENST00000519509 FYB1O15117 783 aa13.3□□□□□ -0.28
CCDC25-204ENST00000519509 PRR29P0C7W0 189 aa13.3□□□□□ -0.28
CCDC25-204ENST00000519509 GYS1P13807 737 aa13.3□□□□□ -0.28
CCDC25-204ENST00000519509 ATP6V1AP38606 617 aa13.3□□□□□ -0.28
CCDC25-204ENST00000519509 TMF1P82094 1093 aa13.3□□□□□ -0.28
CCDC25-204ENST00000519509 SMC1BQ8NDV3 1235 aa13.3□□□□□ -0.28
CCDC25-204ENST00000519509 SLC4A9Q96Q91 983 aa13.3□□□□□ -0.28
CCDC25-204ENST00000519509 CARD11Q9BXL7 1154 aa13.3□□□□□ -0.28
CCDC25-204ENST00000519509 GGNBP2Q9H3C7 697 aa13.3□□□□□ -0.28
CCDC25-204ENST00000519509 CCDC87Q9NVE4 849 aa13.3□□□□□ -0.28
CCDC25-204ENST00000519509 RNF181Q9P0P0 153 aa13.3□□□□□ -0.28
CCDC25-204ENST00000519509 PRKAR2AP13861 404 aaKnown RBP13.29□□□□□ -0.28
CCDC25-204ENST00000519509 NLGN1Q8N2Q7 840 aa13.29□□□□□ -0.28
CCDC25-204ENST00000519509 ARHGEF1Q92888 912 aaKnown RBP13.29□□□□□ -0.28
CCDC25-204ENST00000519509 ATG3Q9NT62 314 aa13.29□□□□□ -0.28
CCDC25-204ENST00000519509 TONSLQ96HA7 1378 aa13.29□□□□□ -0.28
CCDC25-204ENST00000519509 KDM6AO15550 1401 aaPredicted RBP13.29□□□□□ -0.28
CCDC25-204ENST00000519509 AFDNP55196 1824 aaKnown RBP13.28□□□□□ -0.28
CCDC25-204ENST00000519509 TRAPPC3LQ5T215 181 aa13.28□□□□□ -0.28
CCDC25-204ENST00000519509 TMOD3Q9NYL9 352 aa13.28□□□□□ -0.28
CCDC25-204ENST00000519509 CCDC88AQ3V6T2 1871 aa13.27□□□□□ -0.28
CCDC25-204ENST00000519509 PIM2Q9P1W9 311 aa13.27□□□□□ -0.29
CCDC25-204ENST00000519509 RTCBQ9Y3I0 505 aaKnown RBP13.27□□□□□ -0.29
CCDC25-204ENST00000519509 NEUROD1Q13562 356 aa13.26□□□□□ -0.29
CCDC25-204ENST00000519509 CNTNAP4Q9C0A0 1308 aa13.25□□□□□ -0.29
CCDC25-204ENST00000519509 DALRD3Q5D0E6 543 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms