RNA–Protein interactions for RNA: ENST00000518857.5

ATP6V1C1-203, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2 BASIC

Gene ATP6V1C1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-203ENST00000518857 FLT4P35916 1363 aa13.06□□□□□ -0.32
ATP6V1C1-203ENST00000518857 NSD3Q9BZ95 1437 aa13.06□□□□□ -0.32
ATP6V1C1-203ENST00000518857 EVX2Q03828 476 aa13.06□□□□□ -0.32
ATP6V1C1-203ENST00000518857 AMIGO3Q86WK7 504 aa13.05□□□□□ -0.32
ATP6V1C1-203ENST00000518857 PCDH11XQ9BZA7 1347 aa13.05□□□□□ -0.32
ATP6V1C1-203ENST00000518857 PCDH11YQ9BZA8 1340 aa13.05□□□□□ -0.32
ATP6V1C1-203ENST00000518857 KIF20BQ96Q89 1820 aa13.05□□□□□ -0.32
ATP6V1C1-203ENST00000518857 COL24A1Q17RW2 1714 aa13.05□□□□□ -0.32
ATP6V1C1-203ENST00000518857 POLR3GLQ9BT43 218 aa13.04□□□□□ -0.32
ATP6V1C1-203ENST00000518857 PALLDQ8WX93 1383 aa13.04□□□□□ -0.32
ATP6V1C1-203ENST00000518857 CHD4Q14839 1912 aa13.04□□□□□ -0.32
ATP6V1C1-203ENST00000518857 YBX3P16989 372 aaKnown RBP eCLIP13.03□□□□□ -0.32
ATP6V1C1-203ENST00000518857 PIGBQ92521 554 aa13.03□□□□□ -0.32
ATP6V1C1-203ENST00000518857 EYA1Q99502 592 aa13.03□□□□□ -0.32
ATP6V1C1-203ENST00000518857 TSPYL2Q9H2G4 693 aaPredicted RBP13.03□□□□□ -0.32
ATP6V1C1-203ENST00000518857 TNNT2P45379 298 aaPredicted RBP13.03□□□□□ -0.32
ATP6V1C1-203ENST00000518857 NUBP1P53384 320 aa13.03□□□□□ -0.32
ATP6V1C1-203ENST00000518857 SPOCK2Q92563 424 aa13.03□□□□□ -0.32
ATP6V1C1-203ENST00000518857 PCGF6Q9BYE7 350 aa13.03□□□□□ -0.32
ATP6V1C1-203ENST00000518857 KIF24Q5T7B8 1368 aa13.02□□□□□ -0.32
ATP6V1C1-203ENST00000518857 POLKQ9UBT6 870 aa13.02□□□□□ -0.33
ATP6V1C1-203ENST00000518857 WASHC2AQ641Q2 1341 aa13.02□□□□□ -0.33
ATP6V1C1-203ENST00000518857 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
ATP6V1C1-203ENST00000518857 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
ATP6V1C1-203ENST00000518857 TOGARAM1Q9Y4F4 1720 aa13.01□□□□□ -0.33
ATP6V1C1-203ENST00000518857 C5P01031 1676 aa13□□□□□ -0.33
ATP6V1C1-203ENST00000518857 C1QTNF8P60827 252 aa13□□□□□ -0.33
ATP6V1C1-203ENST00000518857 SPG7Q9UQ90 795 aa13□□□□□ -0.33
ATP6V1C1-203ENST00000518857 PHF14O94880 888 aa12.99□□□□□ -0.33
ATP6V1C1-203ENST00000518857 LINC00116Q8NCU8 138 aa12.99□□□□□ -0.33
ATP6V1C1-203ENST00000518857 SMARCC1Q92922 1105 aaPredicted RBP12.99□□□□□ -0.33
ATP6V1C1-203ENST00000518857 AK7Q96M32 723 aa12.99□□□□□ -0.33
ATP6V1C1-203ENST00000518857 ASAP1Q9ULH1 1129 aa12.99□□□□□ -0.33
ATP6V1C1-203ENST00000518857 ITGB4P16144 1822 aa12.99□□□□□ -0.33
ATP6V1C1-203ENST00000518857 NCAPD2Q15021 1401 aa12.99□□□□□ -0.33
ATP6V1C1-203ENST00000518857 EIF4A2Q14240 407 aaKnown RBP12.98□□□□□ -0.33
ATP6V1C1-203ENST00000518857 MAP2P11137 1827 aaKnown RBP12.98□□□□□ -0.33
ATP6V1C1-203ENST00000518857 TAF1LQ8IZX4 1826 aa12.98□□□□□ -0.33
ATP6V1C1-203ENST00000518857 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.98□□□□□ -0.33
ATP6V1C1-203ENST00000518857 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
ATP6V1C1-203ENST00000518857 SIK1P57059 783 aa12.98□□□□□ -0.33
ATP6V1C1-203ENST00000518857 ITPK1Q13572 414 aa12.98□□□□□ -0.33
ATP6V1C1-203ENST00000518857 DCAF8Q5TAQ9 597 aa12.98□□□□□ -0.33
ATP6V1C1-203ENST00000518857 FLAD1Q8NFF5 587 aa12.98□□□□□ -0.33
ATP6V1C1-203ENST00000518857 SP7Q8TDD2 431 aaPredicted RBP12.98□□□□□ -0.33
ATP6V1C1-203ENST00000518857 FAM212AQ96EL1 285 aa12.98□□□□□ -0.33
ATP6V1C1-203ENST00000518857 WWC3Q9ULE0 1092 aa12.98□□□□□ -0.33
ATP6V1C1-203ENST00000518857 TIMELESSQ9UNS1 1208 aa12.98□□□□□ -0.33
ATP6V1C1-203ENST00000518857 PKD1L3Q7Z443 1732 aa12.97□□□□□ -0.33
ATP6V1C1-203ENST00000518857 SENP3-EIF4A1A0A087X0R7 540 aa12.97□□□□□ -0.33
ATP6V1C1-203ENST00000518857 PHKG2P15735 406 aa12.97□□□□□ -0.33
ATP6V1C1-203ENST00000518857 TMOD3Q9NYL9 352 aa12.97□□□□□ -0.33
ATP6V1C1-203ENST00000518857 CD2APQ9Y5K6 639 aa12.97□□□□□ -0.33
ATP6V1C1-203ENST00000518857 C4BP0C0L5 1744 aa12.96□□□□□ -0.33
ATP6V1C1-203ENST00000518857 GRIN3BO60391 1043 aa12.96□□□□□ -0.33
ATP6V1C1-203ENST00000518857 IFNL2Q8IZJ0 200 aa12.96□□□□□ -0.33
ATP6V1C1-203ENST00000518857 PANK3Q9H999 370 aa12.96□□□□□ -0.33
ATP6V1C1-203ENST00000518857 ATG3Q9NT62 314 aa12.96□□□□□ -0.33
ATP6V1C1-203ENST00000518857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.333e-6■■■■□ 22.6
ATP6V1C1-203ENST00000518857 ANKRD26Q9UPS8 1709 aa12.95□□□□□ -0.34
ATP6V1C1-203ENST00000518857 ATP6V1AP38606 617 aa12.95□□□□□ -0.34
ATP6V1C1-203ENST00000518857 HSPA5P11021 654 aaKnown RBP12.94□□□□□ -0.34
ATP6V1C1-203ENST00000518857 GNPATO15228 680 aa12.93□□□□□ -0.34
ATP6V1C1-203ENST00000518857 GIGYF1O75420 1035 aaPredicted RBP12.93□□□□□ -0.34
ATP6V1C1-203ENST00000518857 SLC4A9Q96Q91 983 aa12.93□□□□□ -0.34
ATP6V1C1-203ENST00000518857 UBR3Q6ZT12 1888 aa12.93□□□□□ -0.34
ATP6V1C1-203ENST00000518857 HMGB2P26583 209 aaKnown RBP12.93□□□□□ -0.34
ATP6V1C1-203ENST00000518857 SSFA2P28290 1259 aa12.93□□□□□ -0.34
ATP6V1C1-203ENST00000518857 EIF4G2P78344 907 aaKnown RBP eCLIP12.92□□□□□ -0.34
ATP6V1C1-203ENST00000518857 GSE1Q14687 1217 aa12.92□□□□□ -0.34
ATP6V1C1-203ENST00000518857 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
ATP6V1C1-203ENST00000518857 IGSF1Q8N6C5 1336 aa12.91□□□□□ -0.34
ATP6V1C1-203ENST00000518857 AEBP1Q8IUX7 1158 aa12.91□□□□□ -0.34
ATP6V1C1-203ENST00000518857 CEP350Q5VT06 3117 aa12.9□□□□□ -0.34
ATP6V1C1-203ENST00000518857 CLSPNQ9HAW4 1339 aa12.9□□□□□ -0.34
ATP6V1C1-203ENST00000518857 ERVV-2B6SEH9 535 aa12.89□□□□□ -0.35
ATP6V1C1-203ENST00000518857 MMP10P09238 476 aa12.89□□□□□ -0.35
ATP6V1C1-203ENST00000518857 ZNF526Q8TF50 670 aaPredicted RBP12.89□□□□□ -0.35
ATP6V1C1-203ENST00000518857 ATP10DQ9P241 1426 aa12.89□□□□□ -0.35
ATP6V1C1-203ENST00000518857 CLCN6P51797 869 aa12.88□□□□□ -0.35
ATP6V1C1-203ENST00000518857 PLEKHO1Q53GL0 409 aaPredicted RBP12.88□□□□□ -0.35
ATP6V1C1-203ENST00000518857 TRAPPC3LQ5T215 181 aa12.88□□□□□ -0.35
ATP6V1C1-203ENST00000518857 ZNF530Q6P9A1 599 aaPredicted RBP12.88□□□□□ -0.35
ATP6V1C1-203ENST00000518857 MORC1Q86VD1 984 aa12.88□□□□□ -0.35
ATP6V1C1-203ENST00000518857 DCAF5Q96JK2 942 aa12.88□□□□□ -0.35
ATP6V1C1-203ENST00000518857 CIZ1Q9ULV3 898 aaPredicted RBP12.88□□□□□ -0.35
ATP6V1C1-203ENST00000518857 CABP4P57796 275 aa12.88□□□□□ -0.35
ATP6V1C1-203ENST00000518857 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
ATP6V1C1-203ENST00000518857 RTCBQ9Y3I0 505 aaKnown RBP12.88□□□□□ -0.35
ATP6V1C1-203ENST00000518857 KDRP35968 1356 aa12.87□□□□□ -0.35
ATP6V1C1-203ENST00000518857 PTCD1O75127 700 aaKnown RBP12.87□□□□□ -0.35
ATP6V1C1-203ENST00000518857 MTHFSP49914 203 aa12.87□□□□□ -0.35
ATP6V1C1-203ENST00000518857 PHF12Q96QT6 1004 aa12.87□□□□□ -0.35
ATP6V1C1-203ENST00000518857 KDM6AO15550 1401 aaPredicted RBP12.87□□□□□ -0.35
ATP6V1C1-203ENST00000518857 A0A0G2JLW4 131 aa12.86□□□□□ -0.35
ATP6V1C1-203ENST00000518857 HSP90AB1P08238 724 aaKnown RBP12.86□□□□□ -0.35
ATP6V1C1-203ENST00000518857 SULT6B1Q6IMI4 303 aa12.86□□□□□ -0.35
ATP6V1C1-203ENST00000518857 NFATC2IPQ8NCF5 419 aa12.86□□□□□ -0.35
ATP6V1C1-203ENST00000518857 GPBP1L1Q9HC44 474 aaPredicted RBP12.86□□□□□ -0.35
ATP6V1C1-203ENST00000518857 AMOTQ4VCS5 1084 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms