RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 CYP27B1O15528 508 aa17.12■□□□□ 0.33
PABPC1-205ENST00000518196 HSP90AB1P08238 724 aaKnown RBP17.12■□□□□ 0.33
PABPC1-205ENST00000518196 PHKG2P15735 406 aa17.12■□□□□ 0.33
PABPC1-205ENST00000518196 NFE2L2Q16236 605 aa17.12■□□□□ 0.33
PABPC1-205ENST00000518196 KAT6BQ8WYB5 2073 aa17.11■□□□□ 0.33
PABPC1-205ENST00000518196 RGL2O15211 777 aa17.11■□□□□ 0.33
PABPC1-205ENST00000518196 GNAT3A8MTJ3 354 aa17.1■□□□□ 0.33
PABPC1-205ENST00000518196 TMPOP42166 694 aaKnown RBP17.1■□□□□ 0.33
PABPC1-205ENST00000518196 GSE1Q14687 1217 aa17.1■□□□□ 0.33
PABPC1-205ENST00000518196 CHRDL2Q6WN34 429 aa17.1■□□□□ 0.33
PABPC1-205ENST00000518196 APAF1O14727 1248 aa17.09■□□□□ 0.33
PABPC1-205ENST00000518196 PRKAR2AP13861 404 aaKnown RBP17.09■□□□□ 0.33
PABPC1-205ENST00000518196 NKX1-1Q15270 411 aaPredicted RBP17.09■□□□□ 0.33
PABPC1-205ENST00000518196 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
PABPC1-205ENST00000518196 RTF1Q92541 710 aaKnown RBP17.09■□□□□ 0.33
PABPC1-205ENST00000518196 MAP3K5Q99683 1374 aa17.09■□□□□ 0.33
PABPC1-205ENST00000518196 DLG5Q8TDM6 1919 aa17.08■□□□□ 0.33
PABPC1-205ENST00000518196 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.32
PABPC1-205ENST00000518196 RIPK4P57078 832 aa17.08■□□□□ 0.32
PABPC1-205ENST00000518196 LMOD3Q0VAK6 560 aa17.08■□□□□ 0.32
PABPC1-205ENST00000518196 NEUROD2Q15784 382 aa17.08■□□□□ 0.32
PABPC1-205ENST00000518196 FAM182BQ5T319 152 aa17.08■□□□□ 0.32
PABPC1-205ENST00000518196 RASEFQ8IZ41 740 aa17.08■□□□□ 0.32
PABPC1-205ENST00000518196 DCAF5Q96JK2 942 aa17.08■□□□□ 0.32
PABPC1-205ENST00000518196 FAM212AQ96EL1 285 aa17.07■□□□□ 0.32
PABPC1-205ENST00000518196 RRP7AQ9Y3A4 280 aaKnown RBP17.07■□□□□ 0.32
PABPC1-205ENST00000518196 MPRIPQ6WCQ1 1025 aa17.06■□□□□ 0.32
PABPC1-205ENST00000518196 BCL9O00512 1426 aa17.05■□□□□ 0.32
PABPC1-205ENST00000518196 VIRMAQ69YN4 1812 aaKnown RBP17.05■□□□□ 0.32
PABPC1-205ENST00000518196 RNMTO43148 476 aaKnown RBP17.05■□□□□ 0.32
PABPC1-205ENST00000518196 ERVV-2B6SEH9 535 aa17.04■□□□□ 0.32
PABPC1-205ENST00000518196 FXR2P51116 673 aaKnown RBP eCLIP17.04■□□□□ 0.32
PABPC1-205ENST00000518196 NGEFQ8N5V2 710 aa17.04■□□□□ 0.32
PABPC1-205ENST00000518196 LGR6Q9HBX8 967 aa17.04■□□□□ 0.32
PABPC1-205ENST00000518196 SCN11AQ9UI33 1791 aa17.04■□□□□ 0.32
PABPC1-205ENST00000518196 ACSBG1Q96GR2 724 aa17.03■□□□□ 0.32
PABPC1-205ENST00000518196 FARP1Q9Y4F1 1045 aaPredicted RBP17.03■□□□□ 0.32
PABPC1-205ENST00000518196 SBF2Q86WG5 1849 aa17.03■□□□□ 0.32
PABPC1-205ENST00000518196 CABP4P57796 275 aa17.02■□□□□ 0.32
PABPC1-205ENST00000518196 IL17REQ8NFR9 667 aa17.02■□□□□ 0.32
PABPC1-205ENST00000518196 SYTL4Q96C24 671 aaPredicted RBP17.02■□□□□ 0.32
PABPC1-205ENST00000518196 KDM6AO15550 1401 aaPredicted RBP17.02■□□□□ 0.31
PABPC1-205ENST00000518196 PRIM1P49642 420 aaKnown RBP17.01■□□□□ 0.31
PABPC1-205ENST00000518196 TEFQ10587 303 aa17.01■□□□□ 0.31
PABPC1-205ENST00000518196 DCTN1Q14203 1278 aa17.01■□□□□ 0.31
PABPC1-205ENST00000518196 MCM10Q7L590 875 aa17.01■□□□□ 0.31
PABPC1-205ENST00000518196 TMOD3Q9NYL9 352 aa17.01■□□□□ 0.31
PABPC1-205ENST00000518196 TRIM35Q9UPQ4 493 aa17.01■□□□□ 0.31
PABPC1-205ENST00000518196 SALL2Q9Y467 1007 aaPredicted RBP17.01■□□□□ 0.31
PABPC1-205ENST00000518196 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
PABPC1-205ENST00000518196 ITGB4P16144 1822 aa17■□□□□ 0.31
PABPC1-205ENST00000518196 SENP3-EIF4A1A0A087X0R7 540 aa17■□□□□ 0.31
PABPC1-205ENST00000518196 CCDC27Q2M243 656 aa17■□□□□ 0.31
PABPC1-205ENST00000518196 ADAMTS7Q9UKP4 1686 aa17■□□□□ 0.31
PABPC1-205ENST00000518196 TRIM37O94972 964 aa16.99■□□□□ 0.31
PABPC1-205ENST00000518196 CALD1Q05682 793 aaKnown RBP16.99■□□□□ 0.31
PABPC1-205ENST00000518196 ILDR2Q71H61 639 aa16.99■□□□□ 0.31
PABPC1-205ENST00000518196 BCL11BQ9C0K0 894 aaPredicted RBP16.99■□□□□ 0.31
PABPC1-205ENST00000518196 SLC52A2Q9HAB3 445 aa16.99■□□□□ 0.31
PABPC1-205ENST00000518196 CEMIPQ8WUJ3 1361 aa16.99■□□□□ 0.31
PABPC1-205ENST00000518196 TOGARAM1Q9Y4F4 1720 aa16.99■□□□□ 0.31
PABPC1-205ENST00000518196 NHSQ6T4R5 1651 aa16.98■□□□□ 0.31
PABPC1-205ENST00000518196 KCNQ2O43526 872 aa16.98■□□□□ 0.31
PABPC1-205ENST00000518196 PIP4P2Q8N4L2 257 aa16.98■□□□□ 0.31
PABPC1-205ENST00000518196 NFATC2IPQ8NCF5 419 aa16.98■□□□□ 0.31
PABPC1-205ENST00000518196 WWC1Q8IX03 1113 aa16.97■□□□□ 0.31
PABPC1-205ENST00000518196 HNRNPUQ00839 825 aaKnown RBP eCLIP16.96■□□□□ 0.31
PABPC1-205ENST00000518196 SF3B2Q13435 895 aaKnown RBP16.96■□□□□ 0.31
PABPC1-205ENST00000518196 TAF7Q15545 349 aaPredicted RBP16.96■□□□□ 0.31
PABPC1-205ENST00000518196 PIGBQ92521 554 aa16.96■□□□□ 0.31
PABPC1-205ENST00000518196 THUMPD2Q9BTF0 503 aaKnown RBP16.96■□□□□ 0.31
PABPC1-205ENST00000518196 MRC1P22897 1456 aa16.95■□□□□ 0.3
PABPC1-205ENST00000518196 CCDC125Q86Z20 511 aa16.95■□□□□ 0.3
PABPC1-205ENST00000518196 BTBD11A6QL63 1104 aa16.94■□□□□ 0.3
PABPC1-205ENST00000518196 WDR63Q8IWG1 891 aa16.94■□□□□ 0.3
PABPC1-205ENST00000518196 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
PABPC1-205ENST00000518196 BTAF1O14981 1849 aa16.93■□□□□ 0.3
PABPC1-205ENST00000518196 SIPA1L3O60292 1781 aaPredicted RBP16.93■□□□□ 0.3
PABPC1-205ENST00000518196 TSPYL2Q9H2G4 693 aaPredicted RBP16.93■□□□□ 0.3
PABPC1-205ENST00000518196 BABAM1Q9NWV8 329 aa16.93■□□□□ 0.3
PABPC1-205ENST00000518196 APBA3O96018 575 aa16.92■□□□□ 0.3
PABPC1-205ENST00000518196 GNAI1P63096 354 aa16.92■□□□□ 0.3
PABPC1-205ENST00000518196 PTF1AQ7RTS3 328 aa16.92■□□□□ 0.3
PABPC1-205ENST00000518196 LAS1LQ9Y4W2 734 aaKnown RBP16.92■□□□□ 0.3
PABPC1-205ENST00000518196 TTC5Q8N0Z6 440 aa16.91■□□□□ 0.3
PABPC1-205ENST00000518196 IL16Q14005 1332 aa16.91■□□□□ 0.3
PABPC1-205ENST00000518196 CFAP44Q96MT7 982 aa16.9■□□□□ 0.3
PABPC1-205ENST00000518196 ATG3Q9NT62 314 aa16.9■□□□□ 0.3
PABPC1-205ENST00000518196 IFT57Q9NWB7 429 aa16.9■□□□□ 0.3
PABPC1-205ENST00000518196 MIS18AQ9NYP9 233 aa16.9■□□□□ 0.3
PABPC1-205ENST00000518196 TSPYL4Q9UJ04 414 aa16.9■□□□□ 0.3
PABPC1-205ENST00000518196 ASAP1Q9ULH1 1129 aa16.9■□□□□ 0.3
PABPC1-205ENST00000518196 EP400Q96L91 3159 aa16.89■□□□□ 0.29
PABPC1-205ENST00000518196 CHL1O00533 1208 aa16.89■□□□□ 0.29
PABPC1-205ENST00000518196 BAG6P46379 1132 aa16.89■□□□□ 0.29
PABPC1-205ENST00000518196 GOLGA2Q08379 1002 aa16.89■□□□□ 0.29
PABPC1-205ENST00000518196 SLC39A6Q13433 755 aa16.89■□□□□ 0.29
PABPC1-205ENST00000518196 ZNF790Q6PG37 636 aa16.89■□□□□ 0.29
PABPC1-205ENST00000518196 UPF1Q92900 1129 aaKnown RBP eCLIP16.89■□□□□ 0.29
PABPC1-205ENST00000518196 RNF25Q96BH1 459 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms