RNA–Protein interactions for RNA: ENST00000516904.1

RNU6-1198P-201, Transcript of RNA, U6 small nuclear 1198, pseudogene, humanhuman

BASIC

Gene RNU6-1198P, Length 67 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1198P-201ENST00000516904 RHOQP17081 205 aa4.77□□□□□ -1.65
RNU6-1198P-201ENST00000516904 POU4F2Q12837 409 aa4.77□□□□□ -1.65
RNU6-1198P-201ENST00000516904 SCARF1Q14162 830 aa4.77□□□□□ -1.65
RNU6-1198P-201ENST00000516904 MTFR1Q15390 333 aa4.77□□□□□ -1.65
RNU6-1198P-201ENST00000516904 CCDC102BQ68D86 513 aa4.77□□□□□ -1.65
RNU6-1198P-201ENST00000516904 CYP2U1Q7Z449 544 aa4.77□□□□□ -1.65
RNU6-1198P-201ENST00000516904 SIX5Q8N196 739 aa4.77□□□□□ -1.65
RNU6-1198P-201ENST00000516904 ZNF775Q96BV0 537 aaPredicted RBP4.77□□□□□ -1.65
RNU6-1198P-201ENST00000516904 ZNF594Q96JF6 807 aaPredicted RBP4.77□□□□□ -1.65
RNU6-1198P-201ENST00000516904 VRTNQ9H8Y1 702 aa4.77□□□□□ -1.65
RNU6-1198P-201ENST00000516904 DNAAF2Q9NVR5 837 aaKnown RBP4.77□□□□□ -1.65
RNU6-1198P-201ENST00000516904 CUEDC1Q9NWM3 386 aaPredicted RBP4.77□□□□□ -1.65
RNU6-1198P-201ENST00000516904 SLC35F4A4IF30 521 aa4.76□□□□□ -1.65
RNU6-1198P-201ENST00000516904 MYCP01106 439 aaPredicted RBP4.76□□□□□ -1.65
RNU6-1198P-201ENST00000516904 RASA1P20936 1047 aa4.76□□□□□ -1.65
RNU6-1198P-201ENST00000516904 SMTNP53814 917 aa4.76□□□□□ -1.65
RNU6-1198P-201ENST00000516904 DPYDQ12882 1025 aa4.76□□□□□ -1.65
RNU6-1198P-201ENST00000516904 TBCELQ5QJ74 424 aa4.76□□□□□ -1.65
RNU6-1198P-201ENST00000516904 SH3PXD2AQ5TCZ1 1133 aa4.76□□□□□ -1.65
RNU6-1198P-201ENST00000516904 PRICKLE2Q7Z3G6 844 aa4.76□□□□□ -1.65
RNU6-1198P-201ENST00000516904 LARGE2Q8N3Y3 721 aa4.76□□□□□ -1.65
RNU6-1198P-201ENST00000516904 TSEN2Q8NCE0 465 aaKnown RBP4.76□□□□□ -1.65
RNU6-1198P-201ENST00000516904 TPCN2Q8NHX9 752 aa4.76□□□□□ -1.65
RNU6-1198P-201ENST00000516904 ZDHHC1Q8WTX9 485 aa4.76□□□□□ -1.65
RNU6-1198P-201ENST00000516904 SERPINA10Q9UK55 444 aa4.76□□□□□ -1.65
RNU6-1198P-201ENST00000516904 HCN2Q9UL51 889 aa4.76□□□□□ -1.65
RNU6-1198P-201ENST00000516904 FAM196BA6NMK8 535 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 SPATA31C2B4DYI2 1134 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 USP17L15C9J2P7 530 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 USP17L10C9JJH3 530 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 USP17L13C9JLJ4 530 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 USP17L12C9JPN9 530 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 USP17L11C9JVI0 530 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 USP17L21D6R901 530 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 USP17L18D6R9N7 530 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 USP17L22D6RA61 530 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 USP17L17D6RBQ6 530 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 USP17L19D6RCP7 530 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 USP17L20D6RJB6 530 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 ATG7O95352 703 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 VEGFBP49765 207 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 PTSQ03393 145 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 USP17L24Q0WX57 530 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 ANKMY2Q8IV38 441 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 GPR161Q8N6U8 529 aaKnown RBP4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 STK32AQ8WU08 396 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 ARID3AQ99856 593 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 SENP2Q9HC62 589 aa4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 POLMQ9NP87 494 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1198P-201ENST00000516904 A6NJY4 79 aa4.74□□□□□ -1.65
RNU6-1198P-201ENST00000516904 TMEM88BA6NKF7 163 aa4.74□□□□□ -1.65
RNU6-1198P-201ENST00000516904 GPC1P35052 558 aa4.74□□□□□ -1.65
RNU6-1198P-201ENST00000516904 NFX1Q12986 1120 aaKnown RBP4.74□□□□□ -1.65
RNU6-1198P-201ENST00000516904 C4orf17Q53FE4 359 aa4.74□□□□□ -1.65
RNU6-1198P-201ENST00000516904 PPARGC1BQ86YN6 1023 aaKnown RBP4.74□□□□□ -1.65
RNU6-1198P-201ENST00000516904 KIFC2Q96AC6 838 aa4.74□□□□□ -1.65
RNU6-1198P-201ENST00000516904 SIRT1Q96EB6 747 aa4.74□□□□□ -1.65
RNU6-1198P-201ENST00000516904 SCHIP1Q9P0W5 487 aaPredicted RBP4.74□□□□□ -1.65
RNU6-1198P-201ENST00000516904 CDK2AP1O14519 115 aa4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 MAN1A2O60476 641 aa4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 PPFIA3O75145 1194 aa4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 SCNN1AP37088 669 aa4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 PHKA2P46019 1235 aa4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 UBAP2LQ14157 1087 aaKnown RBP4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 TMEM164Q5U3C3 297 aa4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 NBPF10Q6P3W6 841 aaKnown RBP4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 POTEAQ6S8J7 498 aa4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 CAPN12Q6ZSI9 719 aa4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 ERICH6Q7L0X2 663 aa4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 LYSMD3Q7Z3D4 306 aa4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 TRIM50Q86XT4 487 aa4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 NBPF15Q8N660 670 aa4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 PBXIP1Q96AQ6 731 aa4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 CCDC97Q96F63 343 aaPredicted RBP4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 TSPAN10Q9H1Z9 355 aaPredicted RBP4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 PARP3Q9Y6F1 533 aa4.73□□□□□ -1.65
RNU6-1198P-201ENST00000516904 ERBB4Q15303 1308 aa4.72□□□□□ -1.65
RNU6-1198P-201ENST00000516904 UPP2O95045 317 aa4.72□□□□□ -1.65
RNU6-1198P-201ENST00000516904 ELOAQ14241 798 aaKnown RBP4.72□□□□□ -1.65
RNU6-1198P-201ENST00000516904 ZSCAN10Q96SZ4 725 aaPredicted RBP4.72□□□□□ -1.65
RNU6-1198P-201ENST00000516904 NOVA2Q9UNW9 492 aaKnown RBP4.72□□□□□ -1.65
RNU6-1198P-201ENST00000516904 ATAD2Q6PL18 1390 aa4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 M0R2N6 131 aa4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 TERTO14746 1132 aaKnown RBP4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 WEE1P30291 646 aa4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 TXLNAP40222 546 aa4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 ATP1A2P50993 1020 aa4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 SEC13P55735 322 aa4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 TLR1Q15399 786 aa4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 OCLNQ16625 522 aa4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 DBN1Q16643 649 aa4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 ESCO1Q5FWF5 840 aa4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 PHLDB3Q6NSJ2 640 aa4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 LARP1Q6PKG0 1096 aaKnown RBP4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 CCDC155Q8N6L0 562 aa4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 NLRP3Q96P20 1036 aa4.71□□□□□ -1.66
RNU6-1198P-201ENST00000516904 EML1O00423 815 aa4.7□□□□□ -1.66
RNU6-1198P-201ENST00000516904 ATP4AP20648 1035 aa4.7□□□□□ -1.66
RNU6-1198P-201ENST00000516904 LORP23490 312 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms