RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 POLD1P28340 1107 aa9.53□□□□□ -0.88
SCARNA18.2-201ENST00000516882 ATP6V1AP38606 617 aa9.53□□□□□ -0.88
SCARNA18.2-201ENST00000516882 RBM42Q9BTD8 480 aaKnown RBP9.53□□□□□ -0.88
SCARNA18.2-201ENST00000516882 PDGFDQ9GZP0 370 aaPredicted RBP9.53□□□□□ -0.88
SCARNA18.2-201ENST00000516882 ASAP1Q9ULH1 1129 aa9.53□□□□□ -0.88
SCARNA18.2-201ENST00000516882 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
SCARNA18.2-201ENST00000516882 CHD4Q14839 1912 aa9.52□□□□□ -0.88
SCARNA18.2-201ENST00000516882 MYH14Q7Z406 1995 aaKnown RBP9.52□□□□□ -0.89
SCARNA18.2-201ENST00000516882 KDM6AO15550 1401 aaPredicted RBP9.52□□□□□ -0.89
SCARNA18.2-201ENST00000516882 U2AF1L5P0DN76 240 aaPredicted RBP9.52□□□□□ -0.89
SCARNA18.2-201ENST00000516882 COL5A3P25940 1745 aaPredicted RBP9.52□□□□□ -0.89
SCARNA18.2-201ENST00000516882 U2AF1Q01081 240 aaKnown RBP eCLIP9.52□□□□□ -0.89
SCARNA18.2-201ENST00000516882 COL24A1Q17RW2 1714 aa9.52□□□□□ -0.89
SCARNA18.2-201ENST00000516882 NFATC2IPQ8NCF5 419 aa9.52□□□□□ -0.89
SCARNA18.2-201ENST00000516882 GAS2L2Q8NHY3 880 aa9.52□□□□□ -0.89
SCARNA18.2-201ENST00000516882 ATG3Q9NT62 314 aa9.52□□□□□ -0.89
SCARNA18.2-201ENST00000516882 PNPLA7Q6ZV29 1317 aa9.52□□□□□ -0.89
SCARNA18.2-201ENST00000516882 DDX10Q13206 875 aaKnown RBP9.51□□□□□ -0.89
SCARNA18.2-201ENST00000516882 MTHFSDQ2M296 383 aaKnown RBP9.51□□□□□ -0.89
SCARNA18.2-201ENST00000516882 GNAT3A8MTJ3 354 aa9.5□□□□□ -0.89
SCARNA18.2-201ENST00000516882 PTGER2P43116 358 aa9.5□□□□□ -0.89
SCARNA18.2-201ENST00000516882 RALBP1Q15311 655 aa9.5□□□□□ -0.89
SCARNA18.2-201ENST00000516882 ARXQ96QS3 562 aa9.5□□□□□ -0.89
SCARNA18.2-201ENST00000516882 SLC52A2Q9HAB3 445 aa9.5□□□□□ -0.89
SCARNA18.2-201ENST00000516882 SIPA1L3O60292 1781 aaPredicted RBP9.5□□□□□ -0.89
SCARNA18.2-201ENST00000516882 ADAMTS7Q9UKP4 1686 aa9.49□□□□□ -0.89
SCARNA18.2-201ENST00000516882 RNMTO43148 476 aaKnown RBP9.49□□□□□ -0.89
SCARNA18.2-201ENST00000516882 PTCD1O75127 700 aaKnown RBP9.49□□□□□ -0.89
SCARNA18.2-201ENST00000516882 FCHSD2O94868 740 aa9.49□□□□□ -0.89
SCARNA18.2-201ENST00000516882 PHF14O94880 888 aa9.49□□□□□ -0.89
SCARNA18.2-201ENST00000516882 PRKAR2BP31323 418 aa9.49□□□□□ -0.89
SCARNA18.2-201ENST00000516882 TEFQ10587 303 aa9.49□□□□□ -0.89
SCARNA18.2-201ENST00000516882 COL23A1Q86Y22 540 aaPredicted RBP9.49□□□□□ -0.89
SCARNA18.2-201ENST00000516882 PNNQ9H307 717 aaKnown RBP9.49□□□□□ -0.89
SCARNA18.2-201ENST00000516882 MAP3K5Q99683 1374 aa9.49□□□□□ -0.89
SCARNA18.2-201ENST00000516882 UBR2Q8IWV8 1755 aa9.48□□□□□ -0.89
SCARNA18.2-201ENST00000516882 GNPATO15228 680 aa9.48□□□□□ -0.89
SCARNA18.2-201ENST00000516882 SSFA2P28290 1259 aa9.48□□□□□ -0.89
SCARNA18.2-201ENST00000516882 TTC5Q8N0Z6 440 aa9.48□□□□□ -0.89
SCARNA18.2-201ENST00000516882 KLHL34Q8N239 644 aa9.48□□□□□ -0.89
SCARNA18.2-201ENST00000516882 LINC00116Q8NCU8 138 aa9.48□□□□□ -0.89
SCARNA18.2-201ENST00000516882 RTF1Q92541 710 aaKnown RBP9.48□□□□□ -0.89
SCARNA18.2-201ENST00000516882 RSPH6AQ9H0K4 717 aa9.48□□□□□ -0.89
SCARNA18.2-201ENST00000516882 LGR6Q9HBX8 967 aa9.48□□□□□ -0.89
SCARNA18.2-201ENST00000516882 RTCBQ9Y3I0 505 aaKnown RBP9.48□□□□□ -0.89
SCARNA18.2-201ENST00000516882 TJP1Q07157 1748 aa9.48□□□□□ -0.89
SCARNA18.2-201ENST00000516882 MRC1P22897 1456 aa9.47□□□□□ -0.89
SCARNA18.2-201ENST00000516882 CICQ96RK0 1608 aaPredicted RBP9.47□□□□□ -0.89
SCARNA18.2-201ENST00000516882 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.47□□□□□ -0.89
SCARNA18.2-201ENST00000516882 ITPK1Q13572 414 aa9.47□□□□□ -0.89
SCARNA18.2-201ENST00000516882 SGIP1Q9BQI5 828 aa9.47□□□□□ -0.89
SCARNA18.2-201ENST00000516882 FHDC1Q9C0D6 1143 aaPredicted RBP9.47□□□□□ -0.89
SCARNA18.2-201ENST00000516882 C4AP0C0L4 1744 aa9.47□□□□□ -0.89
SCARNA18.2-201ENST00000516882 ADRA2BP18089 450 aa9.46□□□□□ -0.9
SCARNA18.2-201ENST00000516882 TRAPPC3LQ5T215 181 aa9.46□□□□□ -0.9
SCARNA18.2-201ENST00000516882 RC3H1Q5TC82 1133 aaKnown RBP9.46□□□□□ -0.9
SCARNA18.2-201ENST00000516882 MSL1Q68DK7 614 aa9.46□□□□□ -0.9
SCARNA18.2-201ENST00000516882 SYT17Q9BSW7 474 aa9.46□□□□□ -0.9
SCARNA18.2-201ENST00000516882 CNTNAP4Q9C0A0 1308 aa9.46□□□□□ -0.9
SCARNA18.2-201ENST00000516882 MAPK8IP3Q9UPT6 1336 aa9.46□□□□□ -0.9
SCARNA18.2-201ENST00000516882 RFC4P35249 363 aa9.45□□□□□ -0.9
SCARNA18.2-201ENST00000516882 SLC39A6Q13433 755 aa9.45□□□□□ -0.9
SCARNA18.2-201ENST00000516882 PHACTR3Q96KR7 559 aa9.45□□□□□ -0.9
SCARNA18.2-201ENST00000516882 MYBBP1AQ9BQG0 1328 aaKnown RBP9.45□□□□□ -0.9
SCARNA18.2-201ENST00000516882 RPS6KA4O75676 772 aa9.44□□□□□ -0.9
SCARNA18.2-201ENST00000516882 CRKLP46109 303 aaKnown RBP9.44□□□□□ -0.9
SCARNA18.2-201ENST00000516882 NPM2Q86SE8 214 aaKnown RBP9.44□□□□□ -0.9
SCARNA18.2-201ENST00000516882 VSIG10Q8N0Z9 540 aa9.44□□□□□ -0.9
SCARNA18.2-201ENST00000516882 SLC4A9Q96Q91 983 aa9.44□□□□□ -0.9
SCARNA18.2-201ENST00000516882 BTBD11A6QL63 1104 aa9.43□□□□□ -0.9
SCARNA18.2-201ENST00000516882 HTATSF1O43719 755 aaKnown RBP9.43□□□□□ -0.9
SCARNA18.2-201ENST00000516882 STARD3NLO95772 234 aa9.43□□□□□ -0.9
SCARNA18.2-201ENST00000516882 ZNF790Q6PG37 636 aa9.43□□□□□ -0.9
SCARNA18.2-201ENST00000516882 IL17REQ8NFR9 667 aa9.43□□□□□ -0.9
SCARNA18.2-201ENST00000516882 TEX13AQ9BXU3 409 aaPredicted RBP9.43□□□□□ -0.9
SCARNA18.2-201ENST00000516882 KCPQ6ZWJ8 1503 aa9.42□□□□□ -0.9
SCARNA18.2-201ENST00000516882 CEMIPQ8WUJ3 1361 aa9.42□□□□□ -0.9
SCARNA18.2-201ENST00000516882 WDR43Q15061 677 aaKnown RBP eCLIP9.42□□□□□ -0.9
SCARNA18.2-201ENST00000516882 DNAJC10Q8IXB1 793 aa9.42□□□□□ -0.9
SCARNA18.2-201ENST00000516882 NLGN1Q8N2Q7 840 aa9.42□□□□□ -0.9
SCARNA18.2-201ENST00000516882 ARHGEF1Q92888 912 aaKnown RBP9.42□□□□□ -0.9
SCARNA18.2-201ENST00000516882 FMNL2Q96PY5 1086 aa9.42□□□□□ -0.9
SCARNA18.2-201ENST00000516882 CCDC87Q9NVE4 849 aa9.42□□□□□ -0.9
SCARNA18.2-201ENST00000516882 KIF13BQ9NQT8 1826 aa9.42□□□□□ -0.9
SCARNA18.2-201ENST00000516882 ZPR1O75312 459 aa9.41□□□□□ -0.9
SCARNA18.2-201ENST00000516882 GPR162Q16538 588 aa9.41□□□□□ -0.9
SCARNA18.2-201ENST00000516882 SMIM5Q71RC9 77 aa9.41□□□□□ -0.9
SCARNA18.2-201ENST00000516882 MCM10Q7L590 875 aa9.41□□□□□ -0.9
SCARNA18.2-201ENST00000516882 AMIGO3Q86WK7 504 aa9.41□□□□□ -0.9
SCARNA18.2-201ENST00000516882 PELP1Q8IZL8 1130 aaKnown RBP9.41□□□□□ -0.9
SCARNA18.2-201ENST00000516882 CD2APQ9Y5K6 639 aa9.41□□□□□ -0.9
SCARNA18.2-201ENST00000516882 AFDNP55196 1824 aaKnown RBP9.4□□□□□ -0.9
SCARNA18.2-201ENST00000516882 N4BP2Q86UW6 1770 aaPredicted RBP9.4□□□□□ -0.9
SCARNA18.2-201ENST00000516882 HEG1Q9ULI3 1381 aa9.4□□□□□ -0.9
SCARNA18.2-201ENST00000516882 CYP19A1P11511 503 aaPredicted RBP9.4□□□□□ -0.9
SCARNA18.2-201ENST00000516882 PRKRIP1Q9H875 184 aaPredicted RBP9.4□□□□□ -0.9
SCARNA18.2-201ENST00000516882 LAMB4A4D0S4 1761 aa9.4□□□□□ -0.91
SCARNA18.2-201ENST00000516882 KDM3BQ7LBC6 1761 aa9.4□□□□□ -0.91
SCARNA18.2-201ENST00000516882 ZNF316A6NFI3 1004 aaPredicted RBP9.39□□□□□ -0.91
SCARNA18.2-201ENST00000516882 MMP10P09238 476 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms