RNA–Protein interactions for RNA: ENST00000513629.1

CDK7-210, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-210ENST00000513629 USP54Q70EL1 1684 aa13.13□□□□□ -0.31
CDK7-210ENST00000513629 NME9Q86XW9 330 aa13.13□□□□□ -0.31
CDK7-210ENST00000513629 CARD10Q9BWT7 1032 aa13.13□□□□□ -0.31
CDK7-210ENST00000513629 SCUBE2Q9NQ36 999 aa13.13□□□□□ -0.31
CDK7-210ENST00000513629 USP31Q70CQ4 1352 aa13.12□□□□□ -0.31
CDK7-210ENST00000513629 NBPF14Q5TI25 921 aa13.12□□□□□ -0.31
CDK7-210ENST00000513629 MAMSTRQ6ZN01 415 aa13.12□□□□□ -0.31
CDK7-210ENST00000513629 CDCA7Q9BWT1 371 aaPredicted RBP13.12□□□□□ -0.31
CDK7-210ENST00000513629 SBF2Q86WG5 1849 aa13.11□□□□□ -0.31
CDK7-210ENST00000513629 A0A1W2PP64 1363 aa13.11□□□□□ -0.31
CDK7-210ENST00000513629 CCDC7Q96M83 1385 aa13.11□□□□□ -0.31
CDK7-210ENST00000513629 PTF1AQ7RTS3 328 aa13.11□□□□□ -0.31
CDK7-210ENST00000513629 HDGFL2Q7Z4V5 671 aaPredicted RBP13.11□□□□□ -0.31
CDK7-210ENST00000513629 MARCH10Q8NA82 808 aaPredicted RBP13.11□□□□□ -0.31
CDK7-210ENST00000513629 OXER1Q8TDS5 423 aa13.11□□□□□ -0.31
CDK7-210ENST00000513629 SLC12A5Q9H2X9 1139 aa13.11□□□□□ -0.31
CDK7-210ENST00000513629 RGPD3A6NKT7 1758 aaPredicted RBP13.11□□□□□ -0.31
CDK7-210ENST00000513629 RGPD4Q7Z3J3 1758 aa13.11□□□□□ -0.31
CDK7-210ENST00000513629 TNS2Q63HR2 1409 aa13.11□□□□□ -0.31
CDK7-210ENST00000513629 EDC4Q6P2E9 1401 aaKnown RBP13.11□□□□□ -0.31
CDK7-210ENST00000513629 TESPA1A2RU30 521 aaPredicted RBP13.1□□□□□ -0.31
CDK7-210ENST00000513629 PDIA6Q15084 440 aa13.1□□□□□ -0.31
CDK7-210ENST00000513629 BCL9O00512 1426 aa13.1□□□□□ -0.31
CDK7-210ENST00000513629 ERBB3P21860 1342 aa13.1□□□□□ -0.31
CDK7-210ENST00000513629 SLAIN1Q8ND83 568 aa13.09□□□□□ -0.31
CDK7-210ENST00000513629 LTN1O94822 1766 aa13.09□□□□□ -0.31
CDK7-210ENST00000513629 PLSCR1O15162 318 aa13.08□□□□□ -0.32
CDK7-210ENST00000513629 MAP3K9P80192 1104 aa13.08□□□□□ -0.32
CDK7-210ENST00000513629 ANO8Q9HCE9 1232 aaPredicted RBP13.08□□□□□ -0.32
CDK7-210ENST00000513629 TERF2IPQ9NYB0 399 aa13.08□□□□□ -0.32
CDK7-210ENST00000513629 EXOC5O00471 708 aa13.07□□□□□ -0.32
CDK7-210ENST00000513629 SLC34A2O95436 690 aa13.07□□□□□ -0.32
CDK7-210ENST00000513629 TESK2Q96S53 571 aa13.07□□□□□ -0.32
CDK7-210ENST00000513629 NLRP2Q9NX02 1062 aa13.07□□□□□ -0.32
CDK7-210ENST00000513629 ST20-MTHFSA0A0A6YYL1 179 aa13.06□□□□□ -0.32
CDK7-210ENST00000513629 SPDYE16A6NNV3 312 aaPredicted RBP13.06□□□□□ -0.32
CDK7-210ENST00000513629 ANKRD24Q8TF21 1146 aa13.06□□□□□ -0.32
CDK7-210ENST00000513629 PTCD2Q8WV60 388 aaKnown RBP13.06□□□□□ -0.32
CDK7-210ENST00000513629 NINLQ9Y2I6 1382 aa13.06□□□□□ -0.32
CDK7-210ENST00000513629 PUS7Q96PZ0 661 aaKnown RBP13.05□□□□□ -0.32
CDK7-210ENST00000513629 IL2RBP14784 551 aa13.04□□□□□ -0.32
CDK7-210ENST00000513629 SPON1Q9HCB6 807 aa13.04□□□□□ -0.32
CDK7-210ENST00000513629 NHSQ6T4R5 1651 aa13.04□□□□□ -0.32
CDK7-210ENST00000513629 CASZ1Q86V15 1759 aa13.03□□□□□ -0.32
CDK7-210ENST00000513629 KCNQ2O43526 872 aa13.03□□□□□ -0.32
CDK7-210ENST00000513629 TPRNQ4KMQ1 711 aa13.03□□□□□ -0.32
CDK7-210ENST00000513629 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDK7-210ENST00000513629 ACSBG1Q96GR2 724 aa13.03□□□□□ -0.32
CDK7-210ENST00000513629 PPP1R1BQ9UD71 204 aaPredicted RBP13.03□□□□□ -0.32
CDK7-210ENST00000513629 MLLT3P42568 568 aaPredicted RBP13.02□□□□□ -0.33
CDK7-210ENST00000513629 TRIM26Q12899 539 aaPredicted RBP13.02□□□□□ -0.33
CDK7-210ENST00000513629 TXNRD1Q16881 649 aa13.02□□□□□ -0.33
CDK7-210ENST00000513629 PDGFDQ9GZP0 370 aaPredicted RBP13.02□□□□□ -0.33
CDK7-210ENST00000513629 USP47Q96K76 1375 aa13.02□□□□□ -0.33
CDK7-210ENST00000513629 TULP1O00294 542 aaPredicted RBP13.01□□□□□ -0.33
CDK7-210ENST00000513629 PRKCSHP14314 528 aaPredicted RBP13.01□□□□□ -0.33
CDK7-210ENST00000513629 IP6K1Q92551 441 aa13.01□□□□□ -0.33
CDK7-210ENST00000513629 LTV1Q96GA3 475 aaPredicted RBP13.01□□□□□ -0.33
CDK7-210ENST00000513629 COG3Q96JB2 828 aa13.01□□□□□ -0.33
CDK7-210ENST00000513629 ANKRD36BQ8N2N9 1353 aa13.01□□□□□ -0.33
CDK7-210ENST00000513629 FAM208AQ9UK61 1670 aaKnown RBP13□□□□□ -0.33
CDK7-210ENST00000513629 MAP3K19Q56UN5 1328 aa13□□□□□ -0.33
CDK7-210ENST00000513629 TBC1D12O60347 775 aa13□□□□□ -0.33
CDK7-210ENST00000513629 STK32BQ9NY57 414 aa13□□□□□ -0.33
CDK7-210ENST00000513629 ZBTB7AO95365 584 aa12.99□□□□□ -0.33
CDK7-210ENST00000513629 FBLN1P23142 703 aa12.99□□□□□ -0.33
CDK7-210ENST00000513629 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
CDK7-210ENST00000513629 HOXB3P14651 431 aaPredicted RBP12.98□□□□□ -0.33
CDK7-210ENST00000513629 HOXC9P31274 260 aa12.98□□□□□ -0.33
CDK7-210ENST00000513629 TMF1P82094 1093 aa12.98□□□□□ -0.33
CDK7-210ENST00000513629 LHX8Q68G74 356 aa12.98□□□□□ -0.33
CDK7-210ENST00000513629 PAPPAQ13219 1627 aa12.98□□□□□ -0.33
CDK7-210ENST00000513629 UTRNP46939 3433 aa12.98□□□□□ -0.33
CDK7-210ENST00000513629 BTAF1O14981 1849 aa12.97□□□□□ -0.33
CDK7-210ENST00000513629 MYOM1P52179 1685 aa12.97□□□□□ -0.33
CDK7-210ENST00000513629 EVI5O60447 810 aa12.97□□□□□ -0.33
CDK7-210ENST00000513629 AMPHP49418 695 aa12.97□□□□□ -0.33
CDK7-210ENST00000513629 SLC15A2Q16348 729 aa12.97□□□□□ -0.33
CDK7-210ENST00000513629 SMYD5Q6GMV2 418 aa12.97□□□□□ -0.33
CDK7-210ENST00000513629 PCDHGA4Q9Y5G9 962 aa12.97□□□□□ -0.33
CDK7-210ENST00000513629 RTL1A6NKG5 1358 aa12.96□□□□□ -0.33
CDK7-210ENST00000513629 DOK7Q18PE1 504 aa12.96□□□□□ -0.33
CDK7-210ENST00000513629 DDX54Q8TDD1 881 aaKnown RBP12.96□□□□□ -0.33
CDK7-210ENST00000513629 GGNBP2Q9H3C7 697 aa12.96□□□□□ -0.33
CDK7-210ENST00000513629 MEGF6O75095 1541 aa12.96□□□□□ -0.33
CDK7-210ENST00000513629 RRS1Q15050 365 aaKnown RBP12.95□□□□□ -0.34
CDK7-210ENST00000513629 FYB1O15117 783 aa12.94□□□□□ -0.34
CDK7-210ENST00000513629 PTGER2P43116 358 aa12.94□□□□□ -0.34
CDK7-210ENST00000513629 RGPD2P0DJD1 1756 aa12.94□□□□□ -0.34
CDK7-210ENST00000513629 DOT1LQ8TEK3 1739 aa12.93□□□□□ -0.34
CDK7-210ENST00000513629 ZNF827Q17R98 1081 aa12.93□□□□□ -0.34
CDK7-210ENST00000513629 SYTL4Q96C24 671 aaPredicted RBP12.93□□□□□ -0.34
CDK7-210ENST00000513629 SMG6Q86US8 1419 aaKnown RBP12.93□□□□□ -0.34
CDK7-210ENST00000513629 KAT6BQ8WYB5 2073 aa12.93□□□□□ -0.34
CDK7-210ENST00000513629 SHANK3Q9BYB0 1731 aa12.93□□□□□ -0.34
CDK7-210ENST00000513629 KIF20BQ96Q89 1820 aa12.92□□□□□ -0.34
CDK7-210ENST00000513629 ZNF316A6NFI3 1004 aaPredicted RBP12.92□□□□□ -0.34
CDK7-210ENST00000513629 YY1P25490 414 aa12.92□□□□□ -0.34
CDK7-210ENST00000513629 CDCA8Q53HL2 280 aa12.92□□□□□ -0.34
CDK7-210ENST00000513629 USHBP1Q8N6Y0 703 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms