RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	TPM3	P06753	285 aa		13.31	□□□□□ -0.28
PDCD6-210	ENST00000513582	ELF2	Q15723	593 aa		13.31	□□□□□ -0.28
PDCD6-210	ENST00000513582	ZNF397	Q8NF99	534 aa	Predicted RBP	13.31	□□□□□ -0.28
PDCD6-210	ENST00000513582	RILPL2	Q969X0	211 aa		13.31	□□□□□ -0.28
PDCD6-210	ENST00000513582	RAD51AP2	Q09MP3	1159 aa		13.3	□□□□□ -0.28
PDCD6-210	ENST00000513582	FBXO38	Q6PIJ6	1188 aa		13.3	□□□□□ -0.28
PDCD6-210	ENST00000513582	SRCIN1	Q9C0H9	1055 aa		13.3	□□□□□ -0.28
PDCD6-210	ENST00000513582	MADD	Q8WXG6	1647 aa		13.3	□□□□□ -0.28
PDCD6-210	ENST00000513582	KRT24	Q2M2I5	525 aa		13.3	□□□□□ -0.28
PDCD6-210	ENST00000513582	CEP152	O94986	1710 aa		13.3	□□□□□ -0.28
PDCD6-210	ENST00000513582	ERC2	O15083	957 aa		13.3	□□□□□ -0.28
PDCD6-210	ENST00000513582	TSHZ3	Q63HK5	1081 aa		13.3	□□□□□ -0.28
PDCD6-210	ENST00000513582	RBM6	P78332	1123 aa	Known RBP	13.29	□□□□□ -0.28
PDCD6-210	ENST00000513582	TEX2	Q8IWB9	1127 aa		13.29	□□□□□ -0.28
PDCD6-210	ENST00000513582	SLC26A8	Q96RN1	970 aa		13.29	□□□□□ -0.28
PDCD6-210	ENST00000513582	RSPH14	Q9UHP6	348 aa		13.29	□□□□□ -0.28
PDCD6-210	ENST00000513582	ABCC11	Q96J66	1382 aa		13.29	□□□□□ -0.28
PDCD6-210	ENST00000513582	PTPRT	O14522	1441 aa		13.29	□□□□□ -0.28
PDCD6-210	ENST00000513582	SYCP1	Q15431	976 aa		13.29	□□□□□ -0.28
PDCD6-210	ENST00000513582	CFAP44	Q96MT7	982 aa		13.29	□□□□□ -0.28
PDCD6-210	ENST00000513582	LARP6	Q9BRS8	491 aa	Known RBP	13.29	□□□□□ -0.28
PDCD6-210	ENST00000513582	CEP135	Q66GS9	1140 aa		13.29	□□□□□ -0.28
PDCD6-210	ENST00000513582	LUZP1	Q86V48	1076 aa		13.29	□□□□□ -0.28
PDCD6-210	ENST00000513582	PALD1	Q9ULE6	856 aa		13.29	□□□□□ -0.28
PDCD6-210	ENST00000513582	ERCC6L2	Q5T890	1561 aa		13.28	□□□□□ -0.28
PDCD6-210	ENST00000513582	NME9	Q86XW9	330 aa		13.28	□□□□□ -0.28
PDCD6-210	ENST00000513582	NEK11	Q8NG66	645 aa		13.28	□□□□□ -0.28
PDCD6-210	ENST00000513582	CCDC9	Q9Y3X0	531 aa	Known RBP	13.28	□□□□□ -0.28
PDCD6-210	ENST00000513582	WDR33	Q9C0J8	1336 aa	Known RBP	13.28	□□□□□ -0.28
PDCD6-210	ENST00000513582	PAXBP1	Q9Y5B6	917 aa		13.28	□□□□□ -0.28
PDCD6-210	ENST00000513582	UGGT1	Q9NYU2	1555 aa		13.28	□□□□□ -0.28
PDCD6-210	ENST00000513582	CAMK4	Q16566	473 aa		13.27	□□□□□ -0.28
PDCD6-210	ENST00000513582	TSPYL6	Q8N831	410 aa		13.27	□□□□□ -0.28
PDCD6-210	ENST00000513582	POLR3G	O15318	223 aa	Predicted RBP	13.27	□□□□□ -0.28
PDCD6-210	ENST00000513582	OS9	Q13438	667 aa	Predicted RBP	13.27	□□□□□ -0.28
PDCD6-210	ENST00000513582	ADGRL1	O94910	1474 aa		13.27	□□□□□ -0.29
PDCD6-210	ENST00000513582	MCM10	Q7L590	875 aa		13.27	□□□□□ -0.29
PDCD6-210	ENST00000513582	TRIM5	Q9C035	493 aa		13.27	□□□□□ -0.29
PDCD6-210	ENST00000513582	TSPYL1	Q9H0U9	437 aa		13.27	□□□□□ -0.29
PDCD6-210	ENST00000513582	FANCA	O15360	1455 aa		13.27	□□□□□ -0.29
PDCD6-210	ENST00000513582	ERVK-7	P63135	1459 aa		13.27	□□□□□ -0.29
PDCD6-210	ENST00000513582	CD109	Q6YHK3	1445 aa		13.27	□□□□□ -0.29
PDCD6-210	ENST00000513582	KDM5A	P29375	1690 aa	Known RBP	13.27	□□□□□ -0.29
PDCD6-210	ENST00000513582	UBE2H	P62256	183 aa		13.26	□□□□□ -0.29
PDCD6-210	ENST00000513582	TWISTNB	Q3B726	338 aa	Predicted RBP	13.26	□□□□□ -0.29
PDCD6-210	ENST00000513582	ANO2	Q9NQ90	1003 aa		13.26	□□□□□ -0.29
PDCD6-210	ENST00000513582	ZNF518A	Q6AHZ1	1483 aa		13.26	□□□□□ -0.29
PDCD6-210	ENST00000513582	CYP2C19	P33261	490 aa		13.26	□□□□□ -0.29
PDCD6-210	ENST00000513582	ALDH1L2	Q3SY69	923 aa		13.26	□□□□□ -0.29
PDCD6-210	ENST00000513582	C10orf67	Q8IYJ2	551 aa		13.26	□□□□□ -0.29
PDCD6-210	ENST00000513582	ZSCAN25	Q6NSZ9	544 aa		13.25	□□□□□ -0.29
PDCD6-210	ENST00000513582	COG3	Q96JB2	828 aa		13.25	□□□□□ -0.29
PDCD6-210	ENST00000513582	TRMT1	Q9NXH9	659 aa	Known RBP	13.25	□□□□□ -0.29
PDCD6-210	ENST00000513582	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.25	□□□□□ -0.29
PDCD6-210	ENST00000513582	EIF2S2	P20042	333 aa	Known RBP	13.25	□□□□□ -0.29
PDCD6-210	ENST00000513582	CUL4A	Q13619	759 aa		13.25	□□□□□ -0.29
PDCD6-210	ENST00000513582	SULT6B1	Q6IMI4	303 aa		13.25	□□□□□ -0.29
PDCD6-210	ENST00000513582	NGDN	Q8NEJ9	315 aa	Known RBP	13.25	□□□□□ -0.29
PDCD6-210	ENST00000513582	PHACTR3	Q96KR7	559 aa		13.25	□□□□□ -0.29
PDCD6-210	ENST00000513582	UHRF1BP1L	A0JNW5	1464 aa		13.25	□□□□□ -0.29
PDCD6-210	ENST00000513582	USP27X	A6NNY8	438 aa		13.25	□□□□□ -0.29
PDCD6-210	ENST00000513582	CCDC192	P0DO97	292 aa		13.25	□□□□□ -0.29
PDCD6-210	ENST00000513582	CLTCL1	P53675	1640 aa		13.24	□□□□□ -0.29
PDCD6-210	ENST00000513582	GYS2	P54840	703 aa		13.24	□□□□□ -0.29
PDCD6-210	ENST00000513582	FUCA2	Q9BTY2	467 aa		13.24	□□□□□ -0.29
PDCD6-210	ENST00000513582	DCTPP1	Q9H773	170 aa		13.24	□□□□□ -0.29
PDCD6-210	ENST00000513582	ZNF446	Q9NWS9	450 aa		13.24	□□□□□ -0.29
PDCD6-210	ENST00000513582	SPHKAP	Q2M3C7	1700 aa		13.24	□□□□□ -0.29
PDCD6-210	ENST00000513582		F6X3S4	739 aa		13.24	□□□□□ -0.29
PDCD6-210	ENST00000513582	TRIM66	O15016	1216 aa		13.24	□□□□□ -0.29
PDCD6-210	ENST00000513582	MAP4K4	O95819	1239 aa	Predicted RBP	13.24	□□□□□ -0.29
PDCD6-210	ENST00000513582	MCM2	P49736	904 aa		13.24	□□□□□ -0.29
PDCD6-210	ENST00000513582	CKAP2L	Q8IYA6	745 aa		13.24	□□□□□ -0.29
PDCD6-210	ENST00000513582		A0A0G2JS52	829 aa		13.23	□□□□□ -0.29
PDCD6-210	ENST00000513582	TRH	P20396	242 aa	Predicted RBP	13.23	□□□□□ -0.29
PDCD6-210	ENST00000513582	PLEKHF1	Q96S99	279 aa		13.23	□□□□□ -0.29
PDCD6-210	ENST00000513582	MRPL50	Q8N5N7	158 aa	Known RBP	13.23	□□□□□ -0.29
PDCD6-210	ENST00000513582	CACTIN	Q8WUQ7	758 aa	Known RBP	13.23	□□□□□ -0.29
PDCD6-210	ENST00000513582	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.23	□□□□□ -0.29
PDCD6-210	ENST00000513582	ZFYVE16	Q7Z3T8	1539 aa		13.23	□□□□□ -0.29
PDCD6-210	ENST00000513582	FYB1	O15117	783 aa		13.23	□□□□□ -0.29
PDCD6-210	ENST00000513582	SYT10	Q6XYQ8	523 aa		13.23	□□□□□ -0.29
PDCD6-210	ENST00000513582	INTS4	Q96HW7	963 aa	Known RBP	13.23	□□□□□ -0.29
PDCD6-210	ENST00000513582	ATP7A	Q04656	1500 aa		13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	TET3	O43151	1660 aa		13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	LOC102724159	A0A0B4J2E5	919 aa		13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	MCC	P23508	829 aa		13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	CEBPA	P49715	358 aa	Predicted RBP	13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	PWP2	Q15269	919 aa	Known RBP	13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	KRBA2	Q6ZNG9	492 aa		13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	SYTL4	Q96C24	671 aa	Predicted RBP	13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	RASSF4	Q9H2L5	321 aa		13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	AMPH	P49418	695 aa		13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	ARID5B	Q14865	1188 aa		13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	C14orf93	Q9H972	538 aa	Known RBP	13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	TCHH	Q07283	1943 aa		13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	DNM1	Q05193	864 aa	Known RBP	13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	PTPN14	Q15678	1187 aa		13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	FAM200A	Q8TCP9	573 aa		13.22	□□□□□ -0.29
PDCD6-210	ENST00000513582	TOMM22	Q9NS69	142 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms