RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 KDM6AO15550 1401 aaPredicted RBP19.4■□□□□ 0.7
SCLT1-209ENST00000511426 SPATA31A6Q5VVP1 1343 aa19.4■□□□□ 0.7
SCLT1-209ENST00000511426 BTBD11A6QL63 1104 aa19.4■□□□□ 0.7
SCLT1-209ENST00000511426 MVPQ14764 893 aaKnown RBP19.4■□□□□ 0.7
SCLT1-209ENST00000511426 CCDC30Q5VVM6 783 aa19.4■□□□□ 0.7
SCLT1-209ENST00000511426 CDCA7Q9BWT1 371 aaPredicted RBP19.4■□□□□ 0.7
SCLT1-209ENST00000511426 THRAP3Q9Y2W1 955 aaKnown RBP19.4■□□□□ 0.7
SCLT1-209ENST00000511426 DISP2A7MBM2 1401 aa19.4■□□□□ 0.7
SCLT1-209ENST00000511426 ELL2O00472 640 aaPredicted RBP19.4■□□□□ 0.7
SCLT1-209ENST00000511426 NKX1-1Q15270 411 aaPredicted RBP19.4■□□□□ 0.7
SCLT1-209ENST00000511426 DDX19BQ9UMR2 479 aa19.4■□□□□ 0.7
SCLT1-209ENST00000511426 VIRMAQ69YN4 1812 aaKnown RBP19.39■□□□□ 0.69
SCLT1-209ENST00000511426 NRAPQ86VF7 1730 aa19.39■□□□□ 0.69
SCLT1-209ENST00000511426 CYP27B1O15528 508 aa19.39■□□□□ 0.69
SCLT1-209ENST00000511426 PANK1Q8TE04 598 aa19.39■□□□□ 0.69
SCLT1-209ENST00000511426 SLC52A2Q9HAB3 445 aa19.39■□□□□ 0.69
SCLT1-209ENST00000511426 SLIT2O94813 1529 aa19.39■□□□□ 0.69
SCLT1-209ENST00000511426 EIF4A1P60842 406 aaKnown RBP19.38■□□□□ 0.69
SCLT1-209ENST00000511426 STK31Q9BXU1 1019 aa19.38■□□□□ 0.69
SCLT1-209ENST00000511426 MIS18AQ9NYP9 233 aa19.38■□□□□ 0.69
SCLT1-209ENST00000511426 CLUAP1Q96AJ1 413 aa19.37■□□□□ 0.69
SCLT1-209ENST00000511426 COG6Q9Y2V7 657 aa19.37■□□□□ 0.69
SCLT1-209ENST00000511426 HEG1Q9ULI3 1381 aa19.37■□□□□ 0.69
SCLT1-209ENST00000511426 ABCC4O15439 1325 aa19.36■□□□□ 0.69
SCLT1-209ENST00000511426 RLBP1P12271 317 aa19.36■□□□□ 0.69
SCLT1-209ENST00000511426 KRT24Q2M2I5 525 aa19.36■□□□□ 0.69
SCLT1-209ENST00000511426 ERVV-2B6SEH9 535 aa19.35■□□□□ 0.69
SCLT1-209ENST00000511426 SHANK3Q9BYB0 1731 aa19.34■□□□□ 0.69
SCLT1-209ENST00000511426 CACNA1FO60840 1977 aa19.34■□□□□ 0.69
SCLT1-209ENST00000511426 CENPQQ7L2Z9 268 aaPredicted RBP19.33■□□□□ 0.69
SCLT1-209ENST00000511426 WNK3Q9BYP7 1800 aa19.33■□□□□ 0.69
SCLT1-209ENST00000511426 LRP6O75581 1613 aa19.33■□□□□ 0.68
SCLT1-209ENST00000511426 ADAMTS2O95450 1211 aa19.33■□□□□ 0.68
SCLT1-209ENST00000511426 SLC4A2P04920 1241 aa19.32■□□□□ 0.68
SCLT1-209ENST00000511426 ZNF790Q6PG37 636 aa19.32■□□□□ 0.68
SCLT1-209ENST00000511426 SPATA31A1Q5TZJ5 1347 aa19.32■□□□□ 0.68
SCLT1-209ENST00000511426 HDGFL1Q5TGJ6 251 aa19.31■□□□□ 0.68
SCLT1-209ENST00000511426 TNS2Q63HR2 1409 aa19.31■□□□□ 0.68
SCLT1-209ENST00000511426 CABP4P57796 275 aa19.3■□□□□ 0.68
SCLT1-209ENST00000511426 ITPRIPQ8IWB1 547 aa19.3■□□□□ 0.68
SCLT1-209ENST00000511426 TMEM57Q8N5G2 664 aa19.3■□□□□ 0.68
SCLT1-209ENST00000511426 KDM2BQ8NHM5 1336 aa19.3■□□□□ 0.68
SCLT1-209ENST00000511426 BARGINQ6ZT62 677 aa19.3■□□□□ 0.68
SCLT1-209ENST00000511426 GIGYF1O75420 1035 aaPredicted RBP19.29■□□□□ 0.68
SCLT1-209ENST00000511426 INTS3Q68E01 1043 aaKnown RBP19.29■□□□□ 0.68
SCLT1-209ENST00000511426 TTC5Q8N0Z6 440 aa19.29■□□□□ 0.68
SCLT1-209ENST00000511426 NFATC2IPQ8NCF5 419 aa19.29■□□□□ 0.68
SCLT1-209ENST00000511426 TNNQ9UQP3 1299 aa19.29■□□□□ 0.68
SCLT1-209ENST00000511426 RGS12O14924 1447 aa19.29■□□□□ 0.68
SCLT1-209ENST00000511426 SPATA31A5Q5VU36 1347 aa19.29■□□□□ 0.68
SCLT1-209ENST00000511426 SPATA31A7Q8IWB4 1347 aa19.29■□□□□ 0.68
SCLT1-209ENST00000511426 PXDNLA1KZ92 1463 aa19.29■□□□□ 0.68
SCLT1-209ENST00000511426 NUTM2BA6NNL0 878 aaPredicted RBP19.28■□□□□ 0.68
SCLT1-209ENST00000511426 NUTM2EB1AL46 878 aaPredicted RBP19.28■□□□□ 0.68
SCLT1-209ENST00000511426 NUTM2AQ8IVF1 878 aaPredicted RBP19.28■□□□□ 0.68
SCLT1-209ENST00000511426 UNC5CLQ8IV45 518 aa19.27■□□□□ 0.68
SCLT1-209ENST00000511426 FNBP4Q8N3X1 1017 aaPredicted RBP19.27■□□□□ 0.68
SCLT1-209ENST00000511426 EXOC5O00471 708 aa19.27■□□□□ 0.67
SCLT1-209ENST00000511426 ZBTB40Q9NUA8 1239 aa19.27■□□□□ 0.67
SCLT1-209ENST00000511426 USP35Q9P2H5 1018 aa19.27■□□□□ 0.67
SCLT1-209ENST00000511426 DBF4Q9UBU7 674 aaPredicted RBP19.27■□□□□ 0.67
SCLT1-209ENST00000511426 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.26■□□□□ 0.67
SCLT1-209ENST00000511426 FLIIQ13045 1269 aa19.26■□□□□ 0.67
SCLT1-209ENST00000511426 FMNL2Q96PY5 1086 aa19.26■□□□□ 0.67
SCLT1-209ENST00000511426 PAPPAQ13219 1627 aa19.26■□□□□ 0.67
SCLT1-209ENST00000511426 TCERG1O14776 1098 aaKnown RBP19.25■□□□□ 0.67
SCLT1-209ENST00000511426 KCNQ3O43525 872 aa19.25■□□□□ 0.67
SCLT1-209ENST00000511426 CCT4P50991 539 aaKnown RBP19.25■□□□□ 0.67
SCLT1-209ENST00000511426 VPS72Q15906 364 aa19.24■□□□□ 0.67
SCLT1-209ENST00000511426 DDX54Q8TDD1 881 aaKnown RBP19.24■□□□□ 0.67
SCLT1-209ENST00000511426 ZBTB7BO15156 539 aaPredicted RBP19.24■□□□□ 0.67
SCLT1-209ENST00000511426 SNRPA1P09661 255 aaKnown RBP19.24■□□□□ 0.67
SCLT1-209ENST00000511426 RWDD1Q9H446 243 aaPredicted RBP19.24■□□□□ 0.67
SCLT1-209ENST00000511426 ERBB4Q15303 1308 aa19.23■□□□□ 0.67
SCLT1-209ENST00000511426 BCL9LQ86UU0 1499 aa19.23■□□□□ 0.67
SCLT1-209ENST00000511426 HDAC1Q13547 482 aaPredicted RBP19.22■□□□□ 0.67
SCLT1-209ENST00000511426 NGLY1Q96IV0 654 aa19.22■□□□□ 0.67
SCLT1-209ENST00000511426 HYPKQ9NX55 129 aa19.22■□□□□ 0.67
SCLT1-209ENST00000511426 UBR2Q8IWV8 1755 aa19.22■□□□□ 0.67
SCLT1-209ENST00000511426 N4BP2Q86UW6 1770 aaPredicted RBP19.21■□□□□ 0.67
SCLT1-209ENST00000511426 FKBP5Q13451 457 aaPredicted RBP19.21■□□□□ 0.67
SCLT1-209ENST00000511426 DDB1Q16531 1140 aa19.2■□□□□ 0.66
SCLT1-209ENST00000511426 ZNF496Q96IT1 587 aaPredicted RBP19.2■□□□□ 0.66
SCLT1-209ENST00000511426 DDX21Q9NR30 783 aaKnown RBP eCLIP19.2■□□□□ 0.66
SCLT1-209ENST00000511426 TMOD3Q9NYL9 352 aa19.2■□□□□ 0.66
SCLT1-209ENST00000511426 LAMB4A4D0S4 1761 aa19.2■□□□□ 0.66
SCLT1-209ENST00000511426 TOGARAM1Q9Y4F4 1720 aa19.2■□□□□ 0.66
SCLT1-209ENST00000511426 IBTKQ9P2D0 1353 aaPredicted RBP19.2■□□□□ 0.66
SCLT1-209ENST00000511426 EIF2S2P20042 333 aaKnown RBP19.2■□□□□ 0.66
SCLT1-209ENST00000511426 G2E3Q7L622 706 aa19.2■□□□□ 0.66
SCLT1-209ENST00000511426 C8orf37Q96NL8 207 aa19.2■□□□□ 0.66
SCLT1-209ENST00000511426 CHPF2Q9P2E5 772 aa19.2■□□□□ 0.66
SCLT1-209ENST00000511426 HSPA1LP34931 641 aa19.19■□□□□ 0.66
SCLT1-209ENST00000511426 SLC39A6Q13433 755 aa19.19■□□□□ 0.66
SCLT1-209ENST00000511426 PCDHB15Q9Y5E8 787 aa19.19■□□□□ 0.66
SCLT1-209ENST00000511426 GLI3P10071 1580 aa19.19■□□□□ 0.66
SCLT1-209ENST00000511426 KCPQ6ZWJ8 1503 aa19.18■□□□□ 0.66
SCLT1-209ENST00000511426 VSIG10Q8N0Z9 540 aa19.17■□□□□ 0.66
SCLT1-209ENST00000511426 ATP10DQ9P241 1426 aa19.17■□□□□ 0.66
SCLT1-209ENST00000511426 TEX13AQ9BXU3 409 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 500.2 ms