RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 DIAPH1O60610 1272 aaKnown RBP16.35■□□□□ 0.21
HMGB2-205ENST00000511316 SENP3-EIF4A1A0A087X0R7 540 aa16.34■□□□□ 0.21
HMGB2-205ENST00000511316 BAG6P46379 1132 aa16.34■□□□□ 0.21
HMGB2-205ENST00000511316 SF3B2Q13435 895 aaKnown RBP16.34■□□□□ 0.21
HMGB2-205ENST00000511316 C20orf194Q5TEA3 1177 aa16.33■□□□□ 0.21
HMGB2-205ENST00000511316 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.2
HMGB2-205ENST00000511316 PRIM1P49642 420 aaKnown RBP16.33■□□□□ 0.2
HMGB2-205ENST00000511316 PLEKHG2Q9H7P9 1386 aa16.33■□□□□ 0.2
HMGB2-205ENST00000511316 PCDH11XQ9BZA7 1347 aa16.32■□□□□ 0.2
HMGB2-205ENST00000511316 PCDH11YQ9BZA8 1340 aa16.32■□□□□ 0.2
HMGB2-205ENST00000511316 PHKG2P15735 406 aa16.31■□□□□ 0.2
HMGB2-205ENST00000511316 UPF2Q9HAU5 1272 aaKnown RBP16.31■□□□□ 0.2
HMGB2-205ENST00000511316 HMOX1P09601 288 aa16.31■□□□□ 0.2
HMGB2-205ENST00000511316 SPG7Q9UQ90 795 aa16.31■□□□□ 0.2
HMGB2-205ENST00000511316 NHSQ6T4R5 1651 aa16.29■□□□□ 0.2
HMGB2-205ENST00000511316 CT47B1P0C2W7 299 aaPredicted RBP16.29■□□□□ 0.2
HMGB2-205ENST00000511316 CLUAP1Q96AJ1 413 aa16.29■□□□□ 0.2
HMGB2-205ENST00000511316 CCDC27Q2M243 656 aa16.28■□□□□ 0.2
HMGB2-205ENST00000511316 WDR63Q8IWG1 891 aa16.28■□□□□ 0.2
HMGB2-205ENST00000511316 IFNL2Q8IZJ0 200 aa16.28■□□□□ 0.2
HMGB2-205ENST00000511316 APAF1O14727 1248 aa16.27■□□□□ 0.2
HMGB2-205ENST00000511316 AMOTQ4VCS5 1084 aa16.27■□□□□ 0.2
HMGB2-205ENST00000511316 KAT6BQ8WYB5 2073 aa16.27■□□□□ 0.19
HMGB2-205ENST00000511316 CANXP27824 592 aaKnown RBP16.26■□□□□ 0.19
HMGB2-205ENST00000511316 PLEKHO1Q53GL0 409 aaPredicted RBP16.26■□□□□ 0.19
HMGB2-205ENST00000511316 LRRC4BQ9NT99 713 aa16.26■□□□□ 0.19
HMGB2-205ENST00000511316 TXNRD1Q16881 649 aa16.26■□□□□ 0.19
HMGB2-205ENST00000511316 MTHFSDQ2M296 383 aaKnown RBP16.26■□□□□ 0.19
HMGB2-205ENST00000511316 PIGBQ92521 554 aa16.26■□□□□ 0.19
HMGB2-205ENST00000511316 PHACTR3Q96KR7 559 aa16.26■□□□□ 0.19
HMGB2-205ENST00000511316 RSPH6AQ9H0K4 717 aa16.26■□□□□ 0.19
HMGB2-205ENST00000511316 TOGARAM1Q9Y4F4 1720 aa16.26■□□□□ 0.19
HMGB2-205ENST00000511316 U2SURPO15042 1029 aaKnown RBP16.25■□□□□ 0.19
HMGB2-205ENST00000511316 BTAF1O14981 1849 aa16.24■□□□□ 0.19
HMGB2-205ENST00000511316 PRKCSHP14314 528 aaPredicted RBP16.24■□□□□ 0.19
HMGB2-205ENST00000511316 RUNDC1Q96C34 613 aa16.24■□□□□ 0.19
HMGB2-205ENST00000511316 CFAP53Q96M91 514 aa16.24■□□□□ 0.19
HMGB2-205ENST00000511316 DOT1LQ8TEK3 1739 aa16.24■□□□□ 0.19
HMGB2-205ENST00000511316 KDM6AO15550 1401 aaPredicted RBP16.24■□□□□ 0.19
HMGB2-205ENST00000511316 ZNF530Q6P9A1 599 aaPredicted RBP16.24■□□□□ 0.19
HMGB2-205ENST00000511316 SYTL4Q96C24 671 aaPredicted RBP16.24■□□□□ 0.19
HMGB2-205ENST00000511316 RREB1Q92766 1687 aa16.24■□□□□ 0.19
HMGB2-205ENST00000511316 RGPD3A6NKT7 1758 aaPredicted RBP16.23■□□□□ 0.19
HMGB2-205ENST00000511316 RGPD4Q7Z3J3 1758 aa16.23■□□□□ 0.19
HMGB2-205ENST00000511316 RGS3P49796 1198 aa16.22■□□□□ 0.19
HMGB2-205ENST00000511316 L1TD1Q5T7N2 865 aaKnown RBP16.22■□□□□ 0.19
HMGB2-205ENST00000511316 MPRIPQ6WCQ1 1025 aa16.22■□□□□ 0.19
HMGB2-205ENST00000511316 WWC1Q8IX03 1113 aa16.22■□□□□ 0.19
HMGB2-205ENST00000511316 DCAF5Q96JK2 942 aa16.22■□□□□ 0.19
HMGB2-205ENST00000511316 MYH16Q9H6N6 1097 aa16.22■□□□□ 0.19
HMGB2-205ENST00000511316 LGR6Q9HBX8 967 aa16.22■□□□□ 0.19
HMGB2-205ENST00000511316 ANO8Q9HCE9 1232 aaPredicted RBP16.22■□□□□ 0.19
HMGB2-205ENST00000511316 FCHSD2O94868 740 aa16.22■□□□□ 0.19
HMGB2-205ENST00000511316 KCNQ4P56696 695 aa16.22■□□□□ 0.19
HMGB2-205ENST00000511316 PLEKHF1Q96S99 279 aa16.22■□□□□ 0.19
HMGB2-205ENST00000511316 RWDD1Q9H446 243 aaPredicted RBP16.22■□□□□ 0.19
HMGB2-205ENST00000511316 NUP188Q5SRE5 1749 aa16.21■□□□□ 0.19
HMGB2-205ENST00000511316 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
HMGB2-205ENST00000511316 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.194e-7■□□□□ 8.9
HMGB2-205ENST00000511316 AKAP4Q5JQC9 854 aa16.21■□□□□ 0.19
HMGB2-205ENST00000511316 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
HMGB2-205ENST00000511316 PRKAR2BP31323 418 aa16.2■□□□□ 0.18
HMGB2-205ENST00000511316 ITGB4P16144 1822 aa16.2■□□□□ 0.18
HMGB2-205ENST00000511316 IL27Q8NEV9 243 aa16.19■□□□□ 0.18
HMGB2-205ENST00000511316 FRAT1Q92837 279 aaPredicted RBP16.19■□□□□ 0.18
HMGB2-205ENST00000511316 ASAP1Q9ULH1 1129 aa16.19■□□□□ 0.18
HMGB2-205ENST00000511316 PSDA5PKW4 1024 aaPredicted RBP16.19■□□□□ 0.18
HMGB2-205ENST00000511316 R3HDM1Q15032 1099 aaKnown RBP16.19■□□□□ 0.18
HMGB2-205ENST00000511316 CCDC146Q8IYE0 955 aa16.19■□□□□ 0.18
HMGB2-205ENST00000511316 IL17REQ8NFR9 667 aa16.19■□□□□ 0.18
HMGB2-205ENST00000511316 ATG3Q9NT62 314 aa16.19■□□□□ 0.18
HMGB2-205ENST00000511316 BCAR3O75815 825 aa16.18■□□□□ 0.18
HMGB2-205ENST00000511316 HSP90AB1P08238 724 aaKnown RBP16.18■□□□□ 0.18
HMGB2-205ENST00000511316 FAM43AQ8N2R8 423 aa16.18■□□□□ 0.18
HMGB2-205ENST00000511316 NFATC2IPQ8NCF5 419 aa16.17■□□□□ 0.18
HMGB2-205ENST00000511316 SLC4A9Q96Q91 983 aa16.17■□□□□ 0.18
HMGB2-205ENST00000511316 PDGFDQ9GZP0 370 aaPredicted RBP16.17■□□□□ 0.18
HMGB2-205ENST00000511316 C1orf141Q5JVX7 400 aa16.17■□□□□ 0.18
HMGB2-205ENST00000511316 LY75O60449 1722 aa16.16■□□□□ 0.18
HMGB2-205ENST00000511316 ADAMTS7Q9UKP4 1686 aa16.16■□□□□ 0.18
HMGB2-205ENST00000511316 RNMTO43148 476 aaKnown RBP16.16■□□□□ 0.18
HMGB2-205ENST00000511316 RARSP54136 660 aaKnown RBP16.16■□□□□ 0.18
HMGB2-205ENST00000511316 SLC27A3Q5K4L6 730 aa16.16■□□□□ 0.18
HMGB2-205ENST00000511316 AKT1S1Q96B36 256 aa16.16■□□□□ 0.18
HMGB2-205ENST00000511316 PAPPAQ13219 1627 aa16.15■□□□□ 0.18
HMGB2-205ENST00000511316 ZNF827Q17R98 1081 aa16.15■□□□□ 0.18
HMGB2-205ENST00000511316 TMOD3Q9NYL9 352 aa16.15■□□□□ 0.18
HMGB2-205ENST00000511316 PALLDQ8WX93 1383 aa16.15■□□□□ 0.18
HMGB2-205ENST00000511316 EIF5BO60841 1220 aaKnown RBP16.15■□□□□ 0.18
HMGB2-205ENST00000511316 IGHDP01880 384 aa16.14■□□□□ 0.17
HMGB2-205ENST00000511316 SLC15A2Q16348 729 aa16.14■□□□□ 0.17
HMGB2-205ENST00000511316 SPINK5Q9NQ38 1064 aaPredicted RBP16.14■□□□□ 0.17
HMGB2-205ENST00000511316 FRAT2O75474 233 aaPredicted RBP16.13■□□□□ 0.17
HMGB2-205ENST00000511316 NBPF14Q5TI25 921 aa16.13■□□□□ 0.17
HMGB2-205ENST00000511316 TBC1D32Q96NH3 1257 aa16.13■□□□□ 0.17
HMGB2-205ENST00000511316 SLC52A2Q9HAB3 445 aa16.13■□□□□ 0.17
HMGB2-205ENST00000511316 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
HMGB2-205ENST00000511316 SCN11AQ9UI33 1791 aa16.13■□□□□ 0.17
HMGB2-205ENST00000511316 CABP4P57796 275 aa16.12■□□□□ 0.17
HMGB2-205ENST00000511316 GAS2L2Q8NHY3 880 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms