RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 ERBB4Q15303 1308 aa10.32□□□□□ -0.76
GYPB-212ENST00000511198 TRAK2O60296 914 aa10.31□□□□□ -0.76
GYPB-212ENST00000511198 PPFIA3O75145 1194 aa10.31□□□□□ -0.76
GYPB-212ENST00000511198 TSGA10IPQ3SY00 556 aa10.31□□□□□ -0.76
GYPB-212ENST00000511198 IRF7Q92985 503 aa10.31□□□□□ -0.76
GYPB-212ENST00000511198 CDCA7Q9BWT1 371 aaPredicted RBP10.31□□□□□ -0.76
GYPB-212ENST00000511198 OSBPL3Q9H4L5 887 aa10.31□□□□□ -0.76
GYPB-212ENST00000511198 PTSQ03393 145 aa10.3□□□□□ -0.76
GYPB-212ENST00000511198 KIF21BO75037 1637 aa10.29□□□□□ -0.76
GYPB-212ENST00000511198 ADAMTSL3P82987 1691 aa10.29□□□□□ -0.76
GYPB-212ENST00000511198 FLIIQ13045 1269 aa10.29□□□□□ -0.76
GYPB-212ENST00000511198 A0A1W2PRU2 124 aa10.28□□□□□ -0.76
GYPB-212ENST00000511198 VSIG8P0DPA2 414 aa10.28□□□□□ -0.76
GYPB-212ENST00000511198 GMPRP36959 345 aa10.28□□□□□ -0.76
GYPB-212ENST00000511198 RNF144AP50876 292 aaPredicted RBP10.28□□□□□ -0.76
GYPB-212ENST00000511198 CHIC2Q9UKJ5 165 aa10.28□□□□□ -0.76
GYPB-212ENST00000511198 SLC35F4A4IF30 521 aa10.27□□□□□ -0.77
GYPB-212ENST00000511198 CYP2U1Q7Z449 544 aa10.27□□□□□ -0.77
GYPB-212ENST00000511198 SLFNL1Q499Z3 407 aa10.26□□□□□ -0.77
GYPB-212ENST00000511198 SENP3-EIF4A1A0A087X0R7 540 aa10.25□□□□□ -0.77
GYPB-212ENST00000511198 SOX11P35716 441 aa10.25□□□□□ -0.77
GYPB-212ENST00000511198 CCDC155Q8N6L0 562 aa10.25□□□□□ -0.77
GYPB-212ENST00000511198 ABCA5Q8WWZ7 1642 aa10.25□□□□□ -0.77
GYPB-212ENST00000511198 ASXL2Q76L83 1435 aa10.24□□□□□ -0.77
GYPB-212ENST00000511198 MEN1O00255 615 aa10.24□□□□□ -0.77
GYPB-212ENST00000511198 SEMA3FQ13275 785 aa10.24□□□□□ -0.77
GYPB-212ENST00000511198 CLN3Q13286 438 aa10.24□□□□□ -0.77
GYPB-212ENST00000511198 LYSMD3Q7Z3D4 306 aa10.24□□□□□ -0.77
GYPB-212ENST00000511198 RNF135Q8IUD6 432 aa10.24□□□□□ -0.77
GYPB-212ENST00000511198 MAP3K4Q9Y6R4 1608 aa10.24□□□□□ -0.77
GYPB-212ENST00000511198 UBTFP17480 764 aaKnown RBP10.23□□□□□ -0.77
GYPB-212ENST00000511198 GPC1P35052 558 aa10.23□□□□□ -0.77
GYPB-212ENST00000511198 ALG2Q9H553 416 aa10.23□□□□□ -0.77
GYPB-212ENST00000511198 ARHGEF10LQ9HCE6 1279 aa10.23□□□□□ -0.77
GYPB-212ENST00000511198 DOLKQ9UPQ8 538 aa10.23□□□□□ -0.77
GYPB-212ENST00000511198 ADAMTS12P58397 1594 aa10.22□□□□□ -0.77
GYPB-212ENST00000511198 MYCP01106 439 aaPredicted RBP10.22□□□□□ -0.77
GYPB-212ENST00000511198 GNRH1P01148 92 aa10.22□□□□□ -0.77
GYPB-212ENST00000511198 ESF1Q9H501 851 aaKnown RBP10.22□□□□□ -0.77
GYPB-212ENST00000511198 PLB1Q6P1J6 1458 aa10.22□□□□□ -0.77
GYPB-212ENST00000511198 TEX14Q8IWB6 1497 aa10.22□□□□□ -0.77
GYPB-212ENST00000511198 RAD21O60216 631 aa10.21□□□□□ -0.77
GYPB-212ENST00000511198 USP4Q13107 963 aa10.21□□□□□ -0.77
GYPB-212ENST00000511198 PRICKLE2Q7Z3G6 844 aa10.21□□□□□ -0.77
GYPB-212ENST00000511198 GRIP2Q9C0E4 1043 aa10.21□□□□□ -0.77
GYPB-212ENST00000511198 RAB6BQ9NRW1 208 aa10.21□□□□□ -0.77
GYPB-212ENST00000511198 CUX1P39880 1505 aa10.21□□□□□ -0.78
GYPB-212ENST00000511198 LORP23490 312 aaPredicted RBP10.2□□□□□ -0.78
GYPB-212ENST00000511198 NANOS1Q8WY41 292 aaKnown RBP10.2□□□□□ -0.78
GYPB-212ENST00000511198 PIK3CDO00329 1044 aa10.19□□□□□ -0.78
GYPB-212ENST00000511198 IL2RAP01589 272 aa10.19□□□□□ -0.78
GYPB-212ENST00000511198 ITGA6P23229 1130 aa10.19□□□□□ -0.78
GYPB-212ENST00000511198 INSM1Q01101 510 aaPredicted RBP10.19□□□□□ -0.78
GYPB-212ENST00000511198 MAP7D1Q3KQU3 841 aa10.19□□□□□ -0.78
GYPB-212ENST00000511198 GPR161Q8N6U8 529 aaKnown RBP10.19□□□□□ -0.78
GYPB-212ENST00000511198 PLPP7Q8NBV4 271 aa10.19□□□□□ -0.78
GYPB-212ENST00000511198 NLRP3Q96P20 1036 aa10.19□□□□□ -0.78
GYPB-212ENST00000511198 HRH3Q9Y5N1 445 aa10.19□□□□□ -0.78
GYPB-212ENST00000511198 MED1Q15648 1581 aaPredicted RBP10.18□□□□□ -0.78
GYPB-212ENST00000511198 POM121CA8CG34 1229 aa10.18□□□□□ -0.78
GYPB-212ENST00000511198 RHOQP17081 205 aa10.18□□□□□ -0.78
GYPB-212ENST00000511198 OXLD1Q5BKU9 147 aa10.18□□□□□ -0.78
GYPB-212ENST00000511198 WWC1Q8IX03 1113 aa10.18□□□□□ -0.78
GYPB-212ENST00000511198 CNKSR1Q969H4 720 aa10.18□□□□□ -0.78
GYPB-212ENST00000511198 ESYT1Q9BSJ8 1104 aa10.18□□□□□ -0.78
GYPB-212ENST00000511198 MADDQ8WXG6 1647 aa10.18□□□□□ -0.78
GYPB-212ENST00000511198 EPRSP07814 1512 aaKnown RBP10.17□□□□□ -0.78
GYPB-212ENST00000511198 XAGE2Q96GT9 111 aa10.17□□□□□ -0.78
GYPB-212ENST00000511198 ABCA10Q8WWZ4 1543 aa10.17□□□□□ -0.78
GYPB-212ENST00000511198 FHAD1B1AJZ9 1412 aa10.16□□□□□ -0.78
GYPB-212ENST00000511198 STAU1O95793 577 aaKnown RBP10.16□□□□□ -0.78
GYPB-212ENST00000511198 POU4F2Q12837 409 aa10.16□□□□□ -0.78
GYPB-212ENST00000511198 SLC27A3Q5K4L6 730 aa10.16□□□□□ -0.78
GYPB-212ENST00000511198 ADAMTS19Q8TE59 1207 aa10.16□□□□□ -0.78
GYPB-212ENST00000511198 CLUAP1Q96AJ1 413 aa10.16□□□□□ -0.78
GYPB-212ENST00000511198 ABCC2Q92887 1545 aa10.16□□□□□ -0.78
GYPB-212ENST00000511198 SPATA31C2B4DYI2 1134 aa10.15□□□□□ -0.78
GYPB-212ENST00000511198 CENPCQ03188 943 aa10.15□□□□□ -0.78
GYPB-212ENST00000511198 SIRT1Q96EB6 747 aa10.15□□□□□ -0.78
GYPB-212ENST00000511198 ETNK1Q9HBU6 452 aa10.15□□□□□ -0.78
GYPB-212ENST00000511198 NBPF10Q6P3W6 841 aaKnown RBP10.14□□□□□ -0.79
GYPB-212ENST00000511198 VWA5B2Q8N398 1253 aa10.14□□□□□ -0.79
GYPB-212ENST00000511198 FNBP4Q8N3X1 1017 aaPredicted RBP10.14□□□□□ -0.79
GYPB-212ENST00000511198 NBPF15Q8N660 670 aa10.14□□□□□ -0.79
GYPB-212ENST00000511198 FHDC1Q9C0D6 1143 aaPredicted RBP10.14□□□□□ -0.79
GYPB-212ENST00000511198 CUEDC1Q9NWM3 386 aaPredicted RBP10.14□□□□□ -0.79
GYPB-212ENST00000511198 BCORL1Q5H9F3 1711 aa10.13□□□□□ -0.79
GYPB-212ENST00000511198 KRT76Q01546 638 aa10.13□□□□□ -0.79
GYPB-212ENST00000511198 LTBP4Q8N2S1 1624 aa10.12□□□□□ -0.79
GYPB-212ENST00000511198 SCNN1DP51172 638 aa10.12□□□□□ -0.79
GYPB-212ENST00000511198 ESCO1Q5FWF5 840 aa10.12□□□□□ -0.79
GYPB-212ENST00000511198 WDR44Q5JSH3 913 aa10.12□□□□□ -0.79
GYPB-212ENST00000511198 NFATC2IPQ8NCF5 419 aa10.12□□□□□ -0.79
GYPB-212ENST00000511198 STK17AQ9UEE5 414 aa10.12□□□□□ -0.79
GYPB-212ENST00000511198 RUSC2Q8N2Y8 1516 aa10.12□□□□□ -0.79
GYPB-212ENST00000511198 KIAA0586Q9BVV6 1533 aa10.12□□□□□ -0.79
GYPB-212ENST00000511198 CUL7Q14999 1698 aa10.12□□□□□ -0.79
GYPB-212ENST00000511198 STRCQ7RTU9 1775 aa10.11□□□□□ -0.79
GYPB-212ENST00000511198 SKIP12755 728 aa10.11□□□□□ -0.79
GYPB-212ENST00000511198 SV2AQ7L0J3 742 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 314.4 ms