RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 PTGER2P43116 358 aa32.3■■■□□ 2.76
SRPK1-210ENST00000508473 ITPK1Q13572 414 aa32.3■■■□□ 2.76
SRPK1-210ENST00000508473 RSPH6AQ9H0K4 717 aa32.3■■■□□ 2.76
SRPK1-210ENST00000508473 MSH5O43196 834 aa32.29■■■□□ 2.76
SRPK1-210ENST00000508473 LINC00116Q8NCU8 138 aa32.29■■■□□ 2.76
SRPK1-210ENST00000508473 HMGB2P26583 209 aaKnown RBP32.28■■■□□ 2.76
SRPK1-210ENST00000508473 PHACTR3Q96KR7 559 aa32.28■■■□□ 2.76
SRPK1-210ENST00000508473 AK7Q96M32 723 aa32.28■■■□□ 2.76
SRPK1-210ENST00000508473 COL23A1Q86Y22 540 aaPredicted RBP32.27■■■□□ 2.76
SRPK1-210ENST00000508473 GAS2L2Q8NHY3 880 aa32.27■■■□□ 2.76
SRPK1-210ENST00000508473 SLC52A2Q9HAB3 445 aa32.27■■■□□ 2.76
SRPK1-210ENST00000508473 TUBGCP6Q96RT7 1819 aa32.27■■■□□ 2.76
SRPK1-210ENST00000508473 RALBP1Q15311 655 aa32.26■■■□□ 2.75
SRPK1-210ENST00000508473 SLC4A9Q96Q91 983 aa32.26■■■□□ 2.75
SRPK1-210ENST00000508473 TAF1LQ8IZX4 1826 aa32.25■■■□□ 2.75
SRPK1-210ENST00000508473 PTCD1O75127 700 aaKnown RBP32.24■■■□□ 2.75
SRPK1-210ENST00000508473 SMIM5Q71RC9 77 aa32.24■■■□□ 2.75
SRPK1-210ENST00000508473 SLC16A10Q8TF71 515 aa32.24■■■□□ 2.75
SRPK1-210ENST00000508473 SCN11AQ9UI33 1791 aa32.24■■■□□ 2.75
SRPK1-210ENST00000508473 C4BP0C0L5 1744 aa32.23■■■□□ 2.75
SRPK1-210ENST00000508473 QSER1Q2KHR3 1735 aa32.23■■■□□ 2.75
SRPK1-210ENST00000508473 AMIGO3Q86WK7 504 aa32.23■■■□□ 2.75
SRPK1-210ENST00000508473 SGIP1Q9BQI5 828 aa32.23■■■□□ 2.75
SRPK1-210ENST00000508473 MAP3K5Q99683 1374 aa32.22■■■□□ 2.75
SRPK1-210ENST00000508473 PHF14O94880 888 aa32.22■■■□□ 2.75
SRPK1-210ENST00000508473 GNAT3A8MTJ3 354 aa32.21■■■□□ 2.75
SRPK1-210ENST00000508473 FCHSD2O94868 740 aa32.21■■■□□ 2.75
SRPK1-210ENST00000508473 SLC39A6Q13433 755 aa32.19■■■□□ 2.74
SRPK1-210ENST00000508473 GNPATO15228 680 aa32.18■■■□□ 2.74
SRPK1-210ENST00000508473 FLAD1Q8NFF5 587 aa32.18■■■□□ 2.74
SRPK1-210ENST00000508473 IL17REQ8NFR9 667 aa32.18■■■□□ 2.74
SRPK1-210ENST00000508473 MRC1P22897 1456 aa32.17■■■□□ 2.74
SRPK1-210ENST00000508473 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.16■■■□□ 2.74
SRPK1-210ENST00000508473 MSL1Q68DK7 614 aa32.16■■■□□ 2.74
SRPK1-210ENST00000508473 ARXQ96QS3 562 aa32.16■■■□□ 2.74
SRPK1-210ENST00000508473 POLD1P28340 1107 aa32.14■■■□□ 2.74
SRPK1-210ENST00000508473 ADAMTS7Q9UKP4 1686 aa32.14■■■□□ 2.74
SRPK1-210ENST00000508473 TEFQ10587 303 aa32.13■■■□□ 2.73
SRPK1-210ENST00000508473 MYBBP1AQ9BQG0 1328 aaKnown RBP32.13■■■□□ 2.73
SRPK1-210ENST00000508473 SSFA2P28290 1259 aa32.12■■■□□ 2.73
SRPK1-210ENST00000508473 FHDC1Q9C0D6 1143 aaPredicted RBP32.12■■■□□ 2.73
SRPK1-210ENST00000508473 VIRMAQ69YN4 1812 aaKnown RBP32.1■■■□□ 2.73
SRPK1-210ENST00000508473 UBR3Q6ZT12 1888 aa32.1■■■□□ 2.73
SRPK1-210ENST00000508473 CNTNAP4Q9C0A0 1308 aa32.08■■■□□ 2.73
SRPK1-210ENST00000508473 RC3H1Q5TC82 1133 aaKnown RBP32.08■■■□□ 2.73
SRPK1-210ENST00000508473 RTCBQ9Y3I0 505 aaKnown RBP32.08■■■□□ 2.73
SRPK1-210ENST00000508473 ZNF831Q5JPB2 1677 aa32.08■■■□□ 2.73
SRPK1-210ENST00000508473 NEFMP07197 916 aa32.07■■■□□ 2.72
SRPK1-210ENST00000508473 DNAJC10Q8IXB1 793 aa32.07■■■□□ 2.72
SRPK1-210ENST00000508473 KLHL34Q8N239 644 aa32.07■■■□□ 2.72
SRPK1-210ENST00000508473 RTF1Q92541 710 aaKnown RBP32.07■■■□□ 2.72
SRPK1-210ENST00000508473 SYT17Q9BSW7 474 aa32.07■■■□□ 2.72
SRPK1-210ENST00000508473 CRKLP46109 303 aaKnown RBP32.06■■■□□ 2.72
SRPK1-210ENST00000508473 MCM10Q7L590 875 aa32.06■■■□□ 2.72
SRPK1-210ENST00000508473 CEMIPQ8WUJ3 1361 aa32.06■■■□□ 2.72
SRPK1-210ENST00000508473 DCTN1Q14203 1278 aa32.05■■■□□ 2.72
SRPK1-210ENST00000508473 TTC5Q8N0Z6 440 aa32.05■■■□□ 2.72
SRPK1-210ENST00000508473 PLEKHF1Q96S99 279 aa32.05■■■□□ 2.72
SRPK1-210ENST00000508473 PRKRIP1Q9H875 184 aaPredicted RBP32.05■■■□□ 2.72
SRPK1-210ENST00000508473 ZNF316A6NFI3 1004 aaPredicted RBP32.04■■■□□ 2.72
SRPK1-210ENST00000508473 TRAPPC3LQ5T215 181 aa32.04■■■□□ 2.72
SRPK1-210ENST00000508473 KCPQ6ZWJ8 1503 aa32.04■■■□□ 2.72
SRPK1-210ENST00000508473 COL5A3P25940 1745 aaPredicted RBP32.03■■■□□ 2.72
SRPK1-210ENST00000508473 RPS6KA4O75676 772 aa32.03■■■□□ 2.72
SRPK1-210ENST00000508473 TJP1Q07157 1748 aa32.02■■■□□ 2.72
SRPK1-210ENST00000508473 COL24A1Q17RW2 1714 aa32.01■■■□□ 2.72
SRPK1-210ENST00000508473 ZNF790Q6PG37 636 aa32.01■■■□□ 2.71
SRPK1-210ENST00000508473 ARHGEF1Q92888 912 aaKnown RBP32.01■■■□□ 2.71
SRPK1-210ENST00000508473 PNNQ9H307 717 aaKnown RBP32■■■□□ 2.71
SRPK1-210ENST00000508473 MAPK8IP3Q9UPT6 1336 aa32■■■□□ 2.71
SRPK1-210ENST00000508473 BTBD11A6QL63 1104 aa31.99■■■□□ 2.71
SRPK1-210ENST00000508473 INTS5Q6P9B9 1019 aaKnown RBP31.99■■■□□ 2.71
SRPK1-210ENST00000508473 ZNF496Q96IT1 587 aaPredicted RBP31.99■■■□□ 2.71
SRPK1-210ENST00000508473 MYH14Q7Z406 1995 aaKnown RBP31.98■■■□□ 2.71
SRPK1-210ENST00000508473 KCNQ3O43525 872 aa31.98■■■□□ 2.71
SRPK1-210ENST00000508473 HTATSF1O43719 755 aaKnown RBP31.98■■■□□ 2.71
SRPK1-210ENST00000508473 ADRA2BP18089 450 aa31.98■■■□□ 2.71
SRPK1-210ENST00000508473 CYP19A1P11511 503 aaPredicted RBP31.97■■■□□ 2.71
SRPK1-210ENST00000508473 VSIG10Q8N0Z9 540 aa31.97■■■□□ 2.71
SRPK1-210ENST00000508473 CCDC87Q9NVE4 849 aa31.97■■■□□ 2.71
SRPK1-210ENST00000508473 RFC4P35249 363 aa31.96■■■□□ 2.71
SRPK1-210ENST00000508473 NFE2L2Q16236 605 aa31.96■■■□□ 2.71
SRPK1-210ENST00000508473 SIPA1L3O60292 1781 aaPredicted RBP31.95■■■□□ 2.71
SRPK1-210ENST00000508473 CICQ96RK0 1608 aaPredicted RBP31.94■■■□□ 2.7
SRPK1-210ENST00000508473 DCAF8L1A6NGE4 600 aa31.94■■■□□ 2.7
SRPK1-210ENST00000508473 WDR43Q15061 677 aaKnown RBP eCLIP31.93■■■□□ 2.7
SRPK1-210ENST00000508473 HEG1Q9ULI3 1381 aa31.93■■■□□ 2.7
SRPK1-210ENST00000508473 UBR2Q8IWV8 1755 aa31.92■■■□□ 2.7
SRPK1-210ENST00000508473 FMNL2Q96PY5 1086 aa31.92■■■□□ 2.7
SRPK1-210ENST00000508473 CCDC146Q8IYE0 955 aa31.91■■■□□ 2.7
SRPK1-210ENST00000508473 NLGN2Q8NFZ4 835 aa31.91■■■□□ 2.7
SRPK1-210ENST00000508473 THUMPD2Q9BTF0 503 aaKnown RBP31.91■■■□□ 2.7
SRPK1-210ENST00000508473 ZBTB1Q9Y2K1 713 aa31.91■■■□□ 2.7
SRPK1-210ENST00000508473 SRP68Q9UHB9 627 aaKnown RBP31.9■■■□□ 2.7
SRPK1-210ENST00000508473 STARD3NLO95772 234 aa31.89■■■□□ 2.7
SRPK1-210ENST00000508473 MMP10P09238 476 aa31.89■■■□□ 2.7
SRPK1-210ENST00000508473 GYS1P13807 737 aa31.89■■■□□ 2.7
SRPK1-210ENST00000508473 CANXP27824 592 aaKnown RBP31.88■■■□□ 2.69
SRPK1-210ENST00000508473 TAF7Q15545 349 aaPredicted RBP31.88■■■□□ 2.69
SRPK1-210ENST00000508473 NLGN1Q8N2Q7 840 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms