RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 ATP6V1AP38606 617 aa20.09■□□□□ 0.81
TRIO-211ENST00000508343 SLC52A2Q9HAB3 445 aa20.09■□□□□ 0.81
TRIO-211ENST00000508343 PNPLA7Q6ZV29 1317 aa20.08■□□□□ 0.81
TRIO-211ENST00000508343 MYBBP1AQ9BQG0 1328 aaKnown RBP20.08■□□□□ 0.81
TRIO-211ENST00000508343 GNAT3A8MTJ3 354 aa20.08■□□□□ 0.81
TRIO-211ENST00000508343 RBM42Q9BTD8 480 aaKnown RBP20.08■□□□□ 0.81
TRIO-211ENST00000508343 MTFR1LQ9H019 292 aa20.08■□□□□ 0.81
TRIO-211ENST00000508343 ATF5Q9Y2D1 282 aaPredicted RBP20.07■□□□□ 0.8
TRIO-211ENST00000508343 SCN11AQ9UI33 1791 aa20.07■□□□□ 0.8
TRIO-211ENST00000508343 MAP3K5Q99683 1374 aa20.07■□□□□ 0.8
TRIO-211ENST00000508343 ITPK1Q13572 414 aa20.06■□□□□ 0.8
TRIO-211ENST00000508343 SLC16A10Q8TF71 515 aa20.06■□□□□ 0.8
TRIO-211ENST00000508343 LINC00116Q8NCU8 138 aa20.05■□□□□ 0.8
TRIO-211ENST00000508343 IL17REQ8NFR9 667 aa20.05■□□□□ 0.8
TRIO-211ENST00000508343 AK7Q96M32 723 aa20.05■□□□□ 0.8
TRIO-211ENST00000508343 SLC4A9Q96Q91 983 aa20.05■□□□□ 0.8
TRIO-211ENST00000508343 PRKRIP1Q9H875 184 aaPredicted RBP20.05■□□□□ 0.8
TRIO-211ENST00000508343 C5P01031 1676 aa20.05■□□□□ 0.8
TRIO-211ENST00000508343 PTCD1O75127 700 aaKnown RBP20.04■□□□□ 0.8
TRIO-211ENST00000508343 PTGER2P43116 358 aa20.04■□□□□ 0.8
TRIO-211ENST00000508343 FLAD1Q8NFF5 587 aa20.04■□□□□ 0.8
TRIO-211ENST00000508343 PPP1R1BQ9UD71 204 aaPredicted RBP20.04■□□□□ 0.8
TRIO-211ENST00000508343 TAF1LQ8IZX4 1826 aa20.04■□□□□ 0.8
TRIO-211ENST00000508343 QSER1Q2KHR3 1735 aa20.03■□□□□ 0.8
TRIO-211ENST00000508343 NEFMP07197 916 aa20.03■□□□□ 0.8
TRIO-211ENST00000508343 COL23A1Q86Y22 540 aaPredicted RBP20.03■□□□□ 0.8
TRIO-211ENST00000508343 PNNQ9H307 717 aaKnown RBP20.03■□□□□ 0.8
TRIO-211ENST00000508343 MSH5O43196 834 aa20.02■□□□□ 0.8
TRIO-211ENST00000508343 TEFQ10587 303 aa20.02■□□□□ 0.8
TRIO-211ENST00000508343 MRC1P22897 1456 aa20.02■□□□□ 0.8
TRIO-211ENST00000508343 ADAMTS7Q9UKP4 1686 aa20.02■□□□□ 0.8
TRIO-211ENST00000508343 PLEKHF1Q96S99 279 aa20.01■□□□□ 0.79
TRIO-211ENST00000508343 C4BP0C0L5 1744 aa20.01■□□□□ 0.79
TRIO-211ENST00000508343 SLC39A6Q13433 755 aa20■□□□□ 0.79
TRIO-211ENST00000508343 RTF1Q92541 710 aaKnown RBP20■□□□□ 0.79
TRIO-211ENST00000508343 SGIP1Q9BQI5 828 aa20■□□□□ 0.79
TRIO-211ENST00000508343 TUBGCP6Q96RT7 1819 aa19.99■□□□□ 0.79
TRIO-211ENST00000508343 HTATSF1O43719 755 aaKnown RBP19.99■□□□□ 0.79
TRIO-211ENST00000508343 RC3H1Q5TC82 1133 aaKnown RBP19.99■□□□□ 0.79
TRIO-211ENST00000508343 CEMIPQ8WUJ3 1361 aa19.98■□□□□ 0.79
TRIO-211ENST00000508343 ZNF831Q5JPB2 1677 aa19.98■□□□□ 0.79
TRIO-211ENST00000508343 GNPATO15228 680 aa19.98■□□□□ 0.79
TRIO-211ENST00000508343 SSFA2P28290 1259 aa19.98■□□□□ 0.79
TRIO-211ENST00000508343 AMIGO3Q86WK7 504 aa19.98■□□□□ 0.79
TRIO-211ENST00000508343 VIRMAQ69YN4 1812 aaKnown RBP19.97■□□□□ 0.79
TRIO-211ENST00000508343 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.97■□□□□ 0.79
TRIO-211ENST00000508343 PHF14O94880 888 aa19.97■□□□□ 0.79
TRIO-211ENST00000508343 POLD1P28340 1107 aa19.96■□□□□ 0.79
TRIO-211ENST00000508343 SMIM5Q71RC9 77 aa19.96■□□□□ 0.79
TRIO-211ENST00000508343 MCM10Q7L590 875 aa19.96■□□□□ 0.79
TRIO-211ENST00000508343 TTC5Q8N0Z6 440 aa19.96■□□□□ 0.79
TRIO-211ENST00000508343 CNTNAP4Q9C0A0 1308 aa19.96■□□□□ 0.79
TRIO-211ENST00000508343 NFE2L2Q16236 605 aa19.95■□□□□ 0.78
TRIO-211ENST00000508343 ZNF790Q6PG37 636 aa19.95■□□□□ 0.78
TRIO-211ENST00000508343 ARXQ96QS3 562 aa19.95■□□□□ 0.78
TRIO-211ENST00000508343 RTCBQ9Y3I0 505 aaKnown RBP19.95■□□□□ 0.78
TRIO-211ENST00000508343 MAPK8IP3Q9UPT6 1336 aa19.95■□□□□ 0.78
TRIO-211ENST00000508343 RPS6KA4O75676 772 aa19.94■□□□□ 0.78
TRIO-211ENST00000508343 TRAPPC3LQ5T215 181 aa19.94■□□□□ 0.78
TRIO-211ENST00000508343 DNAJC10Q8IXB1 793 aa19.94■□□□□ 0.78
TRIO-211ENST00000508343 VSIG10Q8N0Z9 540 aa19.94■□□□□ 0.78
TRIO-211ENST00000508343 UBR3Q6ZT12 1888 aa19.93■□□□□ 0.78
TRIO-211ENST00000508343 BTBD11A6QL63 1104 aa19.93■□□□□ 0.78
TRIO-211ENST00000508343 CRKLP46109 303 aaKnown RBP19.93■□□□□ 0.78
TRIO-211ENST00000508343 DCTN1Q14203 1278 aa19.93■□□□□ 0.78
TRIO-211ENST00000508343 WDR43Q15061 677 aaKnown RBP eCLIP19.93■□□□□ 0.78
TRIO-211ENST00000508343 KCPQ6ZWJ8 1503 aa19.92■□□□□ 0.78
TRIO-211ENST00000508343 ADRA2BP18089 450 aa19.91■□□□□ 0.78
TRIO-211ENST00000508343 MSL1Q68DK7 614 aa19.91■□□□□ 0.78
TRIO-211ENST00000508343 ZNF496Q96IT1 587 aaPredicted RBP19.91■□□□□ 0.78
TRIO-211ENST00000508343 COL5A3P25940 1745 aaPredicted RBP19.9■□□□□ 0.78
TRIO-211ENST00000508343 CYP19A1P11511 503 aaPredicted RBP19.9■□□□□ 0.78
TRIO-211ENST00000508343 TAF7Q15545 349 aaPredicted RBP19.9■□□□□ 0.78
TRIO-211ENST00000508343 INTS5Q6P9B9 1019 aaKnown RBP19.9■□□□□ 0.78
TRIO-211ENST00000508343 ARHGEF1Q92888 912 aaKnown RBP19.9■□□□□ 0.78
TRIO-211ENST00000508343 SIPA1L3O60292 1781 aaPredicted RBP19.9■□□□□ 0.78
TRIO-211ENST00000508343 COL24A1Q17RW2 1714 aa19.89■□□□□ 0.77
TRIO-211ENST00000508343 FMNL2Q96PY5 1086 aa19.89■□□□□ 0.77
TRIO-211ENST00000508343 FHDC1Q9C0D6 1143 aaPredicted RBP19.89■□□□□ 0.77
TRIO-211ENST00000508343 ADAMTS8Q9UP79 889 aa19.89■□□□□ 0.77
TRIO-211ENST00000508343 MYH14Q7Z406 1995 aaKnown RBP19.88■□□□□ 0.77
TRIO-211ENST00000508343 CICQ96RK0 1608 aaPredicted RBP19.88■□□□□ 0.77
TRIO-211ENST00000508343 KCNQ3O43525 872 aa19.88■□□□□ 0.77
TRIO-211ENST00000508343 RFC4P35249 363 aa19.88■□□□□ 0.77
TRIO-211ENST00000508343 SYT17Q9BSW7 474 aa19.88■□□□□ 0.77
TRIO-211ENST00000508343 TEX13AQ9BXU3 409 aaPredicted RBP19.88■□□□□ 0.77
TRIO-211ENST00000508343 CCDC87Q9NVE4 849 aa19.88■□□□□ 0.77
TRIO-211ENST00000508343 TJP1Q07157 1748 aa19.88■□□□□ 0.77
TRIO-211ENST00000508343 HEG1Q9ULI3 1381 aa19.87■□□□□ 0.77
TRIO-211ENST00000508343 ANP32CO43423 234 aa19.87■□□□□ 0.77
TRIO-211ENST00000508343 STARD3NLO95772 234 aa19.87■□□□□ 0.77
TRIO-211ENST00000508343 RIPK4P57078 832 aa19.87■□□□□ 0.77
TRIO-211ENST00000508343 CCDC146Q8IYE0 955 aa19.87■□□□□ 0.77
TRIO-211ENST00000508343 RUNDC1Q96C34 613 aa19.87■□□□□ 0.77
TRIO-211ENST00000508343 UBR2Q8IWV8 1755 aa19.87■□□□□ 0.77
TRIO-211ENST00000508343 TMPOP42166 694 aaKnown RBP19.86■□□□□ 0.77
TRIO-211ENST00000508343 PNISRQ8TF01 805 aaKnown RBP19.85■□□□□ 0.77
TRIO-211ENST00000508343 DLG5Q8TDM6 1919 aa19.84■□□□□ 0.77
TRIO-211ENST00000508343 NLGN1Q8N2Q7 840 aa19.84■□□□□ 0.77
TRIO-211ENST00000508343 THUMPD2Q9BTF0 503 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms