RNA–Protein interactions for RNA: ENST00000507714.1

TRIO-209, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-209ENST00000507714 TMOD3Q9NYL9 352 aa11.72□□□□□ -0.53
TRIO-209ENST00000507714 LAS1LQ9Y4W2 734 aaKnown RBP11.72□□□□□ -0.53
TRIO-209ENST00000507714 CEMIPQ8WUJ3 1361 aa11.71□□□□□ -0.53
TRIO-209ENST00000507714 ZNF521Q96K83 1311 aa11.71□□□□□ -0.53
TRIO-209ENST00000507714 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.53
TRIO-209ENST00000507714 ACSBG1Q96GR2 724 aa11.71□□□□□ -0.53
TRIO-209ENST00000507714 CFAP44Q96MT7 982 aa11.71□□□□□ -0.53
TRIO-209ENST00000507714 SLC52A2Q9HAB3 445 aa11.71□□□□□ -0.53
TRIO-209ENST00000507714 BCL9O00512 1426 aa11.7□□□□□ -0.54
TRIO-209ENST00000507714 THUMPD2Q9BTF0 503 aaKnown RBP11.7□□□□□ -0.54
TRIO-209ENST00000507714 ADAMTS7Q9UKP4 1686 aa11.69□□□□□ -0.54
TRIO-209ENST00000507714 BTBD11A6QL63 1104 aa11.69□□□□□ -0.54
TRIO-209ENST00000507714 EN1Q05925 392 aaPredicted RBP11.69□□□□□ -0.54
TRIO-209ENST00000507714 NBPF14Q5TI25 921 aa11.69□□□□□ -0.54
TRIO-209ENST00000507714 DEFB132Q7Z7B7 95 aa11.69□□□□□ -0.54
TRIO-209ENST00000507714 TTC5Q8N0Z6 440 aa11.69□□□□□ -0.54
TRIO-209ENST00000507714 NFATC2IPQ8NCF5 419 aa11.69□□□□□ -0.54
TRIO-209ENST00000507714 CHMP4AQ9BY43 222 aa11.69□□□□□ -0.54
TRIO-209ENST00000507714 TSPYL4Q9UJ04 414 aa11.69□□□□□ -0.54
TRIO-209ENST00000507714 ITGB4P16144 1822 aa11.69□□□□□ -0.54
TRIO-209ENST00000507714 KDM6AO15550 1401 aaPredicted RBP11.69□□□□□ -0.54
TRIO-209ENST00000507714 CHL1O00533 1208 aa11.68□□□□□ -0.54
TRIO-209ENST00000507714 CENPBP07199 599 aaPredicted RBP11.68□□□□□ -0.54
TRIO-209ENST00000507714 PRIM1P49642 420 aaKnown RBP11.68□□□□□ -0.54
TRIO-209ENST00000507714 SLFN5Q08AF3 891 aa11.68□□□□□ -0.54
TRIO-209ENST00000507714 TNS1Q9HBL0 1735 aaKnown RBP11.67□□□□□ -0.54
TRIO-209ENST00000507714 SMARCC1Q92922 1105 aaPredicted RBP11.67□□□□□ -0.54
TRIO-209ENST00000507714 SBF2Q86WG5 1849 aa11.67□□□□□ -0.54
TRIO-209ENST00000507714 DOT1LQ8TEK3 1739 aa11.66□□□□□ -0.54
TRIO-209ENST00000507714 NHSQ6T4R5 1651 aa11.66□□□□□ -0.54
TRIO-209ENST00000507714 MRC1P22897 1456 aa11.66□□□□□ -0.54
TRIO-209ENST00000507714 PLSCR1O15162 318 aa11.66□□□□□ -0.54
TRIO-209ENST00000507714 ZNF853P0CG23 659 aa11.66□□□□□ -0.54
TRIO-209ENST00000507714 CDCA7LQ96GN5 454 aa11.66□□□□□ -0.54
TRIO-209ENST00000507714 SIPA1L3O60292 1781 aaPredicted RBP11.66□□□□□ -0.54
TRIO-209ENST00000507714 EZH2Q15910 746 aaKnown RBP11.65□□□□□ -0.54
TRIO-209ENST00000507714 MBIPQ9NS73 344 aa11.65□□□□□ -0.54
TRIO-209ENST00000507714 EP400Q96L91 3159 aa11.65□□□□□ -0.54
TRIO-209ENST00000507714 SOS1Q07889 1333 aaPredicted RBP11.64□□□□□ -0.55
TRIO-209ENST00000507714 FANCIQ9NVI1 1328 aa11.64□□□□□ -0.55
TRIO-209ENST00000507714 KCNQ2O43526 872 aa11.64□□□□□ -0.55
TRIO-209ENST00000507714 CT47B1P0C2W7 299 aaPredicted RBP11.64□□□□□ -0.55
TRIO-209ENST00000507714 ZNF790Q6PG37 636 aa11.64□□□□□ -0.55
TRIO-209ENST00000507714 TRMT2AQ8IZ69 625 aaKnown RBP11.64□□□□□ -0.55
TRIO-209ENST00000507714 PIGBQ92521 554 aa11.64□□□□□ -0.55
TRIO-209ENST00000507714 FMNL2Q96PY5 1086 aa11.64□□□□□ -0.55
TRIO-209ENST00000507714 MIS18AQ9NYP9 233 aa11.64□□□□□ -0.55
TRIO-209ENST00000507714 TOGARAM1Q9Y4F4 1720 aa11.63□□□□□ -0.55
TRIO-209ENST00000507714 DUSP27Q5VZP5 1158 aa11.63□□□□□ -0.55
TRIO-209ENST00000507714 TSR2Q969E8 191 aaKnown RBP11.63□□□□□ -0.55
TRIO-209ENST00000507714 ZNF428Q96B54 188 aa11.63□□□□□ -0.55
TRIO-209ENST00000507714 CAMKK2Q96RR4 588 aa11.63□□□□□ -0.55
TRIO-209ENST00000507714 RGPD3A6NKT7 1758 aaPredicted RBP11.62□□□□□ -0.55
TRIO-209ENST00000507714 KDM3BQ7LBC6 1761 aa11.62□□□□□ -0.55
TRIO-209ENST00000507714 RGPD4Q7Z3J3 1758 aa11.62□□□□□ -0.55
TRIO-209ENST00000507714 SLC27A3Q5K4L6 730 aa11.62□□□□□ -0.55
TRIO-209ENST00000507714 TEX13AQ9BXU3 409 aaPredicted RBP11.62□□□□□ -0.55
TRIO-209ENST00000507714 STK32BQ9NY57 414 aa11.62□□□□□ -0.55
TRIO-209ENST00000507714 BTAF1O14981 1849 aa11.62□□□□□ -0.55
TRIO-209ENST00000507714 HOXB7P09629 217 aa11.61□□□□□ -0.55
TRIO-209ENST00000507714 EIF4A1P60842 406 aaKnown RBP11.61□□□□□ -0.55
TRIO-209ENST00000507714 EXOSC9Q06265 439 aaKnown RBP11.61□□□□□ -0.55
TRIO-209ENST00000507714 SLC39A6Q13433 755 aa11.61□□□□□ -0.55
TRIO-209ENST00000507714 TXNRD1Q16881 649 aa11.61□□□□□ -0.55
TRIO-209ENST00000507714 SPINK5Q9NQ38 1064 aaPredicted RBP11.61□□□□□ -0.55
TRIO-209ENST00000507714 ATG3Q9NT62 314 aa11.61□□□□□ -0.55
TRIO-209ENST00000507714 CACNA1FO60840 1977 aa11.61□□□□□ -0.55
TRIO-209ENST00000507714 PTCD1O75127 700 aaKnown RBP11.6□□□□□ -0.55
TRIO-209ENST00000507714 SNRPA1P09661 255 aaKnown RBP11.6□□□□□ -0.55
TRIO-209ENST00000507714 TWISTNBQ3B726 338 aaPredicted RBP11.6□□□□□ -0.55
TRIO-209ENST00000507714 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
TRIO-209ENST00000507714 RBM42Q9BTD8 480 aaKnown RBP11.6□□□□□ -0.55
TRIO-209ENST00000507714 ASAP1Q9ULH1 1129 aa11.6□□□□□ -0.55
TRIO-209ENST00000507714 ZNF496Q96IT1 587 aaPredicted RBP11.59□□□□□ -0.55
TRIO-209ENST00000507714 CCNL1Q9UK58 526 aaPredicted RBP11.59□□□□□ -0.55
TRIO-209ENST00000507714 PALLDQ8WX93 1383 aa11.58□□□□□ -0.56
TRIO-209ENST00000507714 HEG1Q9ULI3 1381 aa11.58□□□□□ -0.56
TRIO-209ENST00000507714 PAPPAQ13219 1627 aa11.58□□□□□ -0.56
TRIO-209ENST00000507714 ELL2O00472 640 aaPredicted RBP11.58□□□□□ -0.56
TRIO-209ENST00000507714 KCNQ3O43525 872 aa11.58□□□□□ -0.56
TRIO-209ENST00000507714 GIGYF1O75420 1035 aaPredicted RBP11.58□□□□□ -0.56
TRIO-209ENST00000507714 STARD3NLO95772 234 aa11.58□□□□□ -0.56
TRIO-209ENST00000507714 CCDC30Q5VVM6 783 aa11.58□□□□□ -0.56
TRIO-209ENST00000507714 PTF1AQ7RTS3 328 aa11.58□□□□□ -0.56
TRIO-209ENST00000507714 C8orf58Q8NAV2 365 aa11.58□□□□□ -0.56
TRIO-209ENST00000507714 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
TRIO-209ENST00000507714 UBR2Q8IWV8 1755 aa11.58□□□□□ -0.56
TRIO-209ENST00000507714 RREB1Q92766 1687 aa11.57□□□□□ -0.56
TRIO-209ENST00000507714 LOC102724428A0A0B4J2F2 783 aa11.57□□□□□ -0.56
TRIO-209ENST00000507714 SIK1P57059 783 aa11.57□□□□□ -0.56
TRIO-209ENST00000507714 R3HDM1Q15032 1099 aaKnown RBP11.57□□□□□ -0.56
TRIO-209ENST00000507714 HDGFL1Q5TGJ6 251 aa11.57□□□□□ -0.56
TRIO-209ENST00000507714 RCAN3Q9UKA8 241 aa11.57□□□□□ -0.56
TRIO-209ENST00000507714 PSDA5PKW4 1024 aaPredicted RBP11.56□□□□□ -0.56
TRIO-209ENST00000507714 VAMP4O75379 141 aa11.56□□□□□ -0.56
TRIO-209ENST00000507714 EIF2S2P20042 333 aaKnown RBP11.56□□□□□ -0.56
TRIO-209ENST00000507714 ATP6V1AP38606 617 aa11.56□□□□□ -0.56
TRIO-209ENST00000507714 ALDH1L2Q3SY69 923 aa11.56□□□□□ -0.56
TRIO-209ENST00000507714 NUP188Q5SRE5 1749 aa11.56□□□□□ -0.56
TRIO-209ENST00000507714 NPM2Q86SE8 214 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms