RNA–Protein interactions for RNA: ENST00000507544.2

COX18-204, Transcript of cytochrome c oxidase assembly factor COX18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COX18, Length 1,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX18-204ENST00000507544 AK7Q96M32 723 aa23.69■■□□□ 1.38
COX18-204ENST00000507544 ATG3Q9NT62 314 aa23.69■■□□□ 1.38
COX18-204ENST00000507544 QSER1Q2KHR3 1735 aa23.69■■□□□ 1.38
COX18-204ENST00000507544 MRC1P22897 1456 aa23.68■■□□□ 1.38
COX18-204ENST00000507544 RNMTO43148 476 aaKnown RBP23.68■■□□□ 1.38
COX18-204ENST00000507544 SLC52A2Q9HAB3 445 aa23.68■■□□□ 1.38
COX18-204ENST00000507544 SCN11AQ9UI33 1791 aa23.68■■□□□ 1.38
COX18-204ENST00000507544 SRCAPQ6ZRS2 3230 aa23.67■■□□□ 1.38
COX18-204ENST00000507544 GNAT3A8MTJ3 354 aa23.67■■□□□ 1.38
COX18-204ENST00000507544 ATP6V1AP38606 617 aa23.67■■□□□ 1.38
COX18-204ENST00000507544 ZBTB7AO95365 584 aa23.66■■□□□ 1.38
COX18-204ENST00000507544 NFATC2IPQ8NCF5 419 aa23.66■■□□□ 1.38
COX18-204ENST00000507544 PNPLA7Q6ZV29 1317 aa23.65■■□□□ 1.38
COX18-204ENST00000507544 RBM42Q9BTD8 480 aaKnown RBP23.65■■□□□ 1.38
COX18-204ENST00000507544 TEFQ10587 303 aa23.64■■□□□ 1.37
COX18-204ENST00000507544 C4BP0C0L5 1744 aa23.64■■□□□ 1.37
COX18-204ENST00000507544 ZNF316A6NFI3 1004 aaPredicted RBP23.63■■□□□ 1.37
COX18-204ENST00000507544 RTF1Q92541 710 aaKnown RBP23.63■■□□□ 1.37
COX18-204ENST00000507544 TAF1LQ8IZX4 1826 aa23.63■■□□□ 1.37
COX18-204ENST00000507544 ZNF831Q5JPB2 1677 aa23.63■■□□□ 1.37
COX18-204ENST00000507544 ADAMTS7Q9UKP4 1686 aa23.63■■□□□ 1.37
COX18-204ENST00000507544 MSH5O43196 834 aa23.62■■□□□ 1.37
COX18-204ENST00000507544 PDGFDQ9GZP0 370 aaPredicted RBP23.62■■□□□ 1.37
COX18-204ENST00000507544 LGR6Q9HBX8 967 aa23.62■■□□□ 1.37
COX18-204ENST00000507544 MAPK8IP3Q9UPT6 1336 aa23.6■■□□□ 1.37
COX18-204ENST00000507544 SSFA2P28290 1259 aa23.6■■□□□ 1.37
COX18-204ENST00000507544 POLD1P28340 1107 aa23.6■■□□□ 1.37
COX18-204ENST00000507544 LINC00116Q8NCU8 138 aa23.6■■□□□ 1.37
COX18-204ENST00000507544 ATF5Q9Y2D1 282 aaPredicted RBP23.6■■□□□ 1.37
COX18-204ENST00000507544 PTCD1O75127 700 aaKnown RBP23.59■■□□□ 1.37
COX18-204ENST00000507544 TTC5Q8N0Z6 440 aa23.59■■□□□ 1.37
COX18-204ENST00000507544 PHACTR3Q96KR7 559 aa23.59■■□□□ 1.37
COX18-204ENST00000507544 PRKRIP1Q9H875 184 aaPredicted RBP23.59■■□□□ 1.37
COX18-204ENST00000507544 HTATSF1O43719 755 aaKnown RBP23.58■■□□□ 1.37
COX18-204ENST00000507544 ITPK1Q13572 414 aa23.58■■□□□ 1.37
COX18-204ENST00000507544 TUBGCP6Q96RT7 1819 aa23.58■■□□□ 1.37
COX18-204ENST00000507544 CNTNAP4Q9C0A0 1308 aa23.58■■□□□ 1.36
COX18-204ENST00000507544 GNPATO15228 680 aa23.57■■□□□ 1.36
COX18-204ENST00000507544 CEMIPQ8WUJ3 1361 aa23.56■■□□□ 1.36
COX18-204ENST00000507544 PTGER2P43116 358 aa23.56■■□□□ 1.36
COX18-204ENST00000507544 WDR43Q15061 677 aaKnown RBP eCLIP23.56■■□□□ 1.36
COX18-204ENST00000507544 RC3H1Q5TC82 1133 aaKnown RBP23.56■■□□□ 1.36
COX18-204ENST00000507544 COL23A1Q86Y22 540 aaPredicted RBP23.55■■□□□ 1.36
COX18-204ENST00000507544 RTCBQ9Y3I0 505 aaKnown RBP23.55■■□□□ 1.36
COX18-204ENST00000507544 CICQ96RK0 1608 aaPredicted RBP23.55■■□□□ 1.36
COX18-204ENST00000507544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.54■■□□□ 1.36
COX18-204ENST00000507544 PHF14O94880 888 aa23.54■■□□□ 1.36
COX18-204ENST00000507544 ADRA2BP18089 450 aa23.54■■□□□ 1.36
COX18-204ENST00000507544 IL17REQ8NFR9 667 aa23.54■■□□□ 1.36
COX18-204ENST00000507544 VIRMAQ69YN4 1812 aaKnown RBP23.54■■□□□ 1.36
COX18-204ENST00000507544 VSIG10Q8N0Z9 540 aa23.53■■□□□ 1.36
COX18-204ENST00000507544 SLC4A9Q96Q91 983 aa23.52■■□□□ 1.36
COX18-204ENST00000507544 ARXQ96QS3 562 aa23.52■■□□□ 1.36
COX18-204ENST00000507544 SGIP1Q9BQI5 828 aa23.52■■□□□ 1.36
COX18-204ENST00000507544 UBR3Q6ZT12 1888 aa23.51■■□□□ 1.35
COX18-204ENST00000507544 SLC39A6Q13433 755 aa23.51■■□□□ 1.35
COX18-204ENST00000507544 COL5A3P25940 1745 aaPredicted RBP23.5■■□□□ 1.35
COX18-204ENST00000507544 DCAF8L1A6NGE4 600 aa23.5■■□□□ 1.35
COX18-204ENST00000507544 NFE2L2Q16236 605 aa23.5■■□□□ 1.35
COX18-204ENST00000507544 PLEKHF1Q96S99 279 aa23.5■■□□□ 1.35
COX18-204ENST00000507544 KCPQ6ZWJ8 1503 aa23.49■■□□□ 1.35
COX18-204ENST00000507544 BTBD11A6QL63 1104 aa23.49■■□□□ 1.35
COX18-204ENST00000507544 CRKLP46109 303 aaKnown RBP23.49■■□□□ 1.35
COX18-204ENST00000507544 ZNF790Q6PG37 636 aa23.49■■□□□ 1.35
COX18-204ENST00000507544 RPS6KA4O75676 772 aa23.48■■□□□ 1.35
COX18-204ENST00000507544 LMOD3Q0VAK6 560 aa23.48■■□□□ 1.35
COX18-204ENST00000507544 TRAPPC3LQ5T215 181 aa23.48■■□□□ 1.35
COX18-204ENST00000507544 TEX13AQ9BXU3 409 aaPredicted RBP23.48■■□□□ 1.35
COX18-204ENST00000507544 MCM10Q7L590 875 aa23.47■■□□□ 1.35
COX18-204ENST00000507544 FMNL2Q96PY5 1086 aa23.47■■□□□ 1.35
COX18-204ENST00000507544 TJP1Q07157 1748 aa23.47■■□□□ 1.35
COX18-204ENST00000507544 ANP32CO43423 234 aa23.46■■□□□ 1.35
COX18-204ENST00000507544 SIPA1L3O60292 1781 aaPredicted RBP23.46■■□□□ 1.35
COX18-204ENST00000507544 STARD3NLO95772 234 aa23.46■■□□□ 1.35
COX18-204ENST00000507544 COL24A1Q17RW2 1714 aa23.46■■□□□ 1.35
COX18-204ENST00000507544 PNISRQ8TF01 805 aaKnown RBP23.46■■□□□ 1.35
COX18-204ENST00000507544 CCDC87Q9NVE4 849 aa23.46■■□□□ 1.35
COX18-204ENST00000507544 UBR2Q8IWV8 1755 aa23.45■■□□□ 1.34
COX18-204ENST00000507544 RFC4P35249 363 aa23.45■■□□□ 1.34
COX18-204ENST00000507544 DNAJC10Q8IXB1 793 aa23.45■■□□□ 1.34
COX18-204ENST00000507544 HEG1Q9ULI3 1381 aa23.44■■□□□ 1.34
COX18-204ENST00000507544 MSL1Q68DK7 614 aa23.44■■□□□ 1.34
COX18-204ENST00000507544 FHDC1Q9C0D6 1143 aaPredicted RBP23.44■■□□□ 1.34
COX18-204ENST00000507544 CYP19A1P11511 503 aaPredicted RBP23.42■■□□□ 1.34
COX18-204ENST00000507544 TAF7Q15545 349 aaPredicted RBP23.42■■□□□ 1.34
COX18-204ENST00000507544 AMIGO3Q86WK7 504 aa23.42■■□□□ 1.34
COX18-204ENST00000507544 ZNF496Q96IT1 587 aaPredicted RBP23.42■■□□□ 1.34
COX18-204ENST00000507544 NLGN1Q8N2Q7 840 aa23.41■■□□□ 1.34
COX18-204ENST00000507544 RUNDC1Q96C34 613 aa23.41■■□□□ 1.34
COX18-204ENST00000507544 DCTN1Q14203 1278 aa23.4■■□□□ 1.34
COX18-204ENST00000507544 NPM2Q86SE8 214 aaKnown RBP23.4■■□□□ 1.34
COX18-204ENST00000507544 KLHL34Q8N239 644 aa23.4■■□□□ 1.34
COX18-204ENST00000507544 ARHGEF1Q92888 912 aaKnown RBP23.4■■□□□ 1.34
COX18-204ENST00000507544 SYT17Q9BSW7 474 aa23.4■■□□□ 1.34
COX18-204ENST00000507544 RIPK4P57078 832 aa23.39■■□□□ 1.33
COX18-204ENST00000507544 INTS5Q6P9B9 1019 aaKnown RBP23.38■■□□□ 1.33
COX18-204ENST00000507544 SOS1Q07889 1333 aaPredicted RBP23.37■■□□□ 1.33
COX18-204ENST00000507544 ZPR1O75312 459 aa23.37■■□□□ 1.33
COX18-204ENST00000507544 SNRPA1P09661 255 aaKnown RBP23.37■■□□□ 1.33
COX18-204ENST00000507544 TMPOP42166 694 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms