RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 FAM208AQ9UK61 1670 aaKnown RBP13.01□□□□□ -0.33
PTPN20-216ENST00000506080 USP47Q96K76 1375 aa13□□□□□ -0.33
PTPN20-216ENST00000506080 USHBP1Q8N6Y0 703 aa13□□□□□ -0.33
PTPN20-216ENST00000506080 METRNQ9UJH8 293 aa13□□□□□ -0.33
PTPN20-216ENST00000506080 RGPD2P0DJD1 1756 aa13□□□□□ -0.33
PTPN20-216ENST00000506080 ATP10DQ9P241 1426 aa12.99□□□□□ -0.33
PTPN20-216ENST00000506080 DCAF8Q5TAQ9 597 aa12.99□□□□□ -0.33
PTPN20-216ENST00000506080 PCDHB13Q9Y5F0 798 aa12.99□□□□□ -0.33
PTPN20-216ENST00000506080 RRS1Q15050 365 aaKnown RBP12.97□□□□□ -0.33
PTPN20-216ENST00000506080 NBPF6Q5VWK0 638 aa12.97□□□□□ -0.33
PTPN20-216ENST00000506080 ZNF526Q8TF50 670 aaPredicted RBP12.97□□□□□ -0.33
PTPN20-216ENST00000506080 SLC39A7Q92504 469 aa12.97□□□□□ -0.33
PTPN20-216ENST00000506080 NBPF4Q96M43 638 aa12.97□□□□□ -0.33
PTPN20-216ENST00000506080 PUS7Q96PZ0 661 aaKnown RBP12.96□□□□□ -0.33
PTPN20-216ENST00000506080 GPBP1L1Q9HC44 474 aaPredicted RBP12.96□□□□□ -0.33
PTPN20-216ENST00000506080 WWC3Q9ULE0 1092 aa12.96□□□□□ -0.33
PTPN20-216ENST00000506080 C7P10643 843 aa12.96□□□□□ -0.34
PTPN20-216ENST00000506080 RAPGEF4Q8WZA2 1011 aa12.96□□□□□ -0.34
PTPN20-216ENST00000506080 CD2APQ9Y5K6 639 aa12.96□□□□□ -0.34
PTPN20-216ENST00000506080 CEP350Q5VT06 3117 aa12.95□□□□□ -0.34
PTPN20-216ENST00000506080 TATP17735 454 aaPredicted RBP12.95□□□□□ -0.34
PTPN20-216ENST00000506080 TIE1P35590 1138 aa12.95□□□□□ -0.34
PTPN20-216ENST00000506080 IFNL1Q8IU54 200 aa12.95□□□□□ -0.34
PTPN20-216ENST00000506080 C5P01031 1676 aa12.94□□□□□ -0.34
PTPN20-216ENST00000506080 MPRIPQ6WCQ1 1025 aa12.94□□□□□ -0.34
PTPN20-216ENST00000506080 SMIM5Q71RC9 77 aa12.94□□□□□ -0.34
PTPN20-216ENST00000506080 FLAD1Q8NFF5 587 aa12.94□□□□□ -0.34
PTPN20-216ENST00000506080 OTUD5Q96G74 571 aa12.94□□□□□ -0.34
PTPN20-216ENST00000506080 GGNBP2Q9H3C7 697 aa12.94□□□□□ -0.34
PTPN20-216ENST00000506080 RTL1A6NKG5 1358 aa12.93□□□□□ -0.34
PTPN20-216ENST00000506080 PALLDQ8WX93 1383 aa12.93□□□□□ -0.34
PTPN20-216ENST00000506080 CGNL1Q0VF96 1302 aa12.93□□□□□ -0.34
PTPN20-216ENST00000506080 PYGBP11216 843 aa12.93□□□□□ -0.34
PTPN20-216ENST00000506080 SMG6Q86US8 1419 aaKnown RBP12.92□□□□□ -0.34
PTPN20-216ENST00000506080 ST20-MTHFSA0A0A6YYL1 179 aa12.92□□□□□ -0.34
PTPN20-216ENST00000506080 TTLL13PA6NNM8 815 aa12.92□□□□□ -0.34
PTPN20-216ENST00000506080 PHF14O94880 888 aa12.92□□□□□ -0.34
PTPN20-216ENST00000506080 HSPA6P17066 643 aa12.92□□□□□ -0.34
PTPN20-216ENST00000506080 AMIGO3Q86WK7 504 aa12.92□□□□□ -0.34
PTPN20-216ENST00000506080 AK7Q96M32 723 aa12.92□□□□□ -0.34
PTPN20-216ENST00000506080 TESK2Q96S53 571 aa12.92□□□□□ -0.34
PTPN20-216ENST00000506080 ADCY9O60503 1353 aa12.92□□□□□ -0.34
PTPN20-216ENST00000506080 IGSF1Q8N6C5 1336 aa12.91□□□□□ -0.34
PTPN20-216ENST00000506080 PCDH11XQ9BZA7 1347 aa12.91□□□□□ -0.34
PTPN20-216ENST00000506080 PCDH11YQ9BZA8 1340 aa12.91□□□□□ -0.34
PTPN20-216ENST00000506080 FYB1O15117 783 aa12.91□□□□□ -0.34
PTPN20-216ENST00000506080 TONSLQ96HA7 1378 aa12.91□□□□□ -0.34
PTPN20-216ENST00000506080 CYP27B1O15528 508 aa12.9□□□□□ -0.34
PTPN20-216ENST00000506080 HSP90AB2PQ58FF8 381 aa12.9□□□□□ -0.34
PTPN20-216ENST00000506080 TAF1LQ8IZX4 1826 aa12.9□□□□□ -0.34
PTPN20-216ENST00000506080 C4BP0C0L5 1744 aa12.9□□□□□ -0.35
PTPN20-216ENST00000506080 POTEJP0CG39 1038 aa12.89□□□□□ -0.35
PTPN20-216ENST00000506080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.88□□□□□ -0.35
PTPN20-216ENST00000506080 HMGB2P26583 209 aaKnown RBP12.88□□□□□ -0.35
PTPN20-216ENST00000506080 IFNLR1Q8IU57 520 aaPredicted RBP12.88□□□□□ -0.35
PTPN20-216ENST00000506080 SMARCC1Q92922 1105 aaPredicted RBP12.88□□□□□ -0.35
PTPN20-216ENST00000506080 INSRP06213 1382 aa12.88□□□□□ -0.35
PTPN20-216ENST00000506080 TOGARAM1Q9Y4F4 1720 aa12.88□□□□□ -0.35
PTPN20-216ENST00000506080 PIGBQ92521 554 aa12.88□□□□□ -0.35
PTPN20-216ENST00000506080 FLT4P35916 1363 aa12.87□□□□□ -0.35
PTPN20-216ENST00000506080 POTEFA5A3E0 1075 aa12.87□□□□□ -0.35
PTPN20-216ENST00000506080 LINC00116Q8NCU8 138 aa12.87□□□□□ -0.35
PTPN20-216ENST00000506080 ITGB4P16144 1822 aa12.86□□□□□ -0.35
PTPN20-216ENST00000506080 KIF3CO14782 793 aa12.86□□□□□ -0.35
PTPN20-216ENST00000506080 UBR3Q6ZT12 1888 aa12.86□□□□□ -0.35
PTPN20-216ENST00000506080 NSD3Q9BZ95 1437 aa12.85□□□□□ -0.35
PTPN20-216ENST00000506080 LOC102724428A0A0B4J2F2 783 aa12.85□□□□□ -0.35
PTPN20-216ENST00000506080 SSFA2P28290 1259 aa12.85□□□□□ -0.35
PTPN20-216ENST00000506080 SIK1P57059 783 aa12.85□□□□□ -0.35
PTPN20-216ENST00000506080 EMILIN1Q9Y6C2 1016 aa12.85□□□□□ -0.35
PTPN20-216ENST00000506080 GNPATO15228 680 aa12.84□□□□□ -0.35
PTPN20-216ENST00000506080 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
PTPN20-216ENST00000506080 TMF1P82094 1093 aa12.84□□□□□ -0.35
PTPN20-216ENST00000506080 TRIM35Q9UPQ4 493 aa12.84□□□□□ -0.35
PTPN20-216ENST00000506080 PPM1GO15355 546 aaPredicted RBP12.83□□□□□ -0.36
PTPN20-216ENST00000506080 ITPK1Q13572 414 aa12.83□□□□□ -0.36
PTPN20-216ENST00000506080 ASAP1Q9ULH1 1129 aa12.83□□□□□ -0.36
PTPN20-216ENST00000506080 SPG7Q9UQ90 795 aa12.83□□□□□ -0.36
PTPN20-216ENST00000506080 PKD1L3Q7Z443 1732 aa12.82□□□□□ -0.36
PTPN20-216ENST00000506080 MMP10P09238 476 aa12.82□□□□□ -0.36
PTPN20-216ENST00000506080 ATP6V1AP38606 617 aa12.82□□□□□ -0.36
PTPN20-216ENST00000506080 NKX1-1Q15270 411 aaPredicted RBP12.82□□□□□ -0.36
PTPN20-216ENST00000506080 TMEM106CQ9BVX2 250 aa12.82□□□□□ -0.36
PTPN20-216ENST00000506080 TMOD3Q9NYL9 352 aa12.82□□□□□ -0.36
PTPN20-216ENST00000506080 PCDHB8Q9UN66 801 aa12.82□□□□□ -0.36
PTPN20-216ENST00000506080 KIF24Q5T7B8 1368 aa12.82□□□□□ -0.36
PTPN20-216ENST00000506080 MAP2P11137 1827 aaKnown RBP12.81□□□□□ -0.36
PTPN20-216ENST00000506080 KIF20BQ96Q89 1820 aa12.81□□□□□ -0.36
PTPN20-216ENST00000506080 GSE1Q14687 1217 aa12.81□□□□□ -0.36
PTPN20-216ENST00000506080 COLQQ9Y215 455 aaPredicted RBP12.81□□□□□ -0.36
PTPN20-216ENST00000506080 BCS1LQ9Y276 419 aa12.81□□□□□ -0.36
PTPN20-216ENST00000506080 PXDNLA1KZ92 1463 aa12.8□□□□□ -0.36
PTPN20-216ENST00000506080 A0A0G2JLW4 131 aa12.79□□□□□ -0.36
PTPN20-216ENST00000506080 APLP1P51693 650 aa12.79□□□□□ -0.36
PTPN20-216ENST00000506080 CARD14Q9BXL6 1004 aa12.79□□□□□ -0.36
PTPN20-216ENST00000506080 NCAPD2Q15021 1401 aa12.79□□□□□ -0.36
PTPN20-216ENST00000506080 CICQ96RK0 1608 aaPredicted RBP12.79□□□□□ -0.36
PTPN20-216ENST00000506080 ARHGAP27Q6ZUM4 889 aa12.79□□□□□ -0.36
PTPN20-216ENST00000506080 IFNL2Q8IZJ0 200 aa12.79□□□□□ -0.36
PTPN20-216ENST00000506080 SPOCK2Q92563 424 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms