RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 PHKG2P15735 406 aa16.95■□□□□ 0.3
LMNA-220ENST00000504687 IFNL2Q8IZJ0 200 aa16.95■□□□□ 0.3
LMNA-220ENST00000504687 LGR6Q9HBX8 967 aa16.95■□□□□ 0.3
LMNA-220ENST00000504687 NWD2Q9ULI1 1742 aa16.94■□□□□ 0.3
LMNA-220ENST00000504687 TEFQ10587 303 aa16.94■□□□□ 0.3
LMNA-220ENST00000504687 KDM6AO15550 1401 aaPredicted RBP16.94■□□□□ 0.3
LMNA-220ENST00000504687 WNK3Q9BYP7 1800 aa16.93■□□□□ 0.3
LMNA-220ENST00000504687 TNNQ9UQP3 1299 aa16.93■□□□□ 0.3
LMNA-220ENST00000504687 RGS12O14924 1447 aa16.93■□□□□ 0.3
LMNA-220ENST00000504687 NRAPQ86VF7 1730 aa16.93■□□□□ 0.3
LMNA-220ENST00000504687 ELL2O00472 640 aaPredicted RBP16.92■□□□□ 0.3
LMNA-220ENST00000504687 EIF4A1P60842 406 aaKnown RBP16.92■□□□□ 0.3
LMNA-220ENST00000504687 CCDC30Q5VVM6 783 aa16.92■□□□□ 0.3
LMNA-220ENST00000504687 DCAF5Q96JK2 942 aa16.92■□□□□ 0.3
LMNA-220ENST00000504687 NKX1-1Q15270 411 aaPredicted RBP16.91■□□□□ 0.3
LMNA-220ENST00000504687 KRT24Q2M2I5 525 aa16.91■□□□□ 0.3
LMNA-220ENST00000504687 MPRIPQ6WCQ1 1025 aa16.91■□□□□ 0.3
LMNA-220ENST00000504687 TOM1L2Q6ZVM7 507 aa16.91■□□□□ 0.3
LMNA-220ENST00000504687 MIS18AQ9NYP9 233 aa16.91■□□□□ 0.3
LMNA-220ENST00000504687 PCDH11XQ9BZA7 1347 aa16.91■□□□□ 0.3
LMNA-220ENST00000504687 PCDH11YQ9BZA8 1340 aa16.91■□□□□ 0.3
LMNA-220ENST00000504687 DISP2A7MBM2 1401 aa16.9■□□□□ 0.3
LMNA-220ENST00000504687 INTS3Q68E01 1043 aaKnown RBP16.9■□□□□ 0.3
LMNA-220ENST00000504687 TMEM57Q8N5G2 664 aa16.9■□□□□ 0.3
LMNA-220ENST00000504687 ZBTB40Q9NUA8 1239 aa16.9■□□□□ 0.3
LMNA-220ENST00000504687 PXDNLA1KZ92 1463 aa16.89■□□□□ 0.29
LMNA-220ENST00000504687 BTBD11A6QL63 1104 aa16.89■□□□□ 0.29
LMNA-220ENST00000504687 CYP27B1O15528 508 aa16.89■□□□□ 0.29
LMNA-220ENST00000504687 IL2RBP14784 551 aa16.89■□□□□ 0.29
LMNA-220ENST00000504687 SLC52A2Q9HAB3 445 aa16.89■□□□□ 0.29
LMNA-220ENST00000504687 PAPPAQ13219 1627 aa16.88■□□□□ 0.29
LMNA-220ENST00000504687 ZCRB1Q8TBF4 217 aaKnown RBP16.88■□□□□ 0.29
LMNA-220ENST00000504687 STK31Q9BXU1 1019 aa16.88■□□□□ 0.29
LMNA-220ENST00000504687 LRP6O75581 1613 aa16.88■□□□□ 0.29
LMNA-220ENST00000504687 ZBTB7BO15156 539 aaPredicted RBP16.87■□□□□ 0.29
LMNA-220ENST00000504687 EVA1CP58658 441 aa16.87■□□□□ 0.29
LMNA-220ENST00000504687 HDAC1Q13547 482 aaPredicted RBP16.87■□□□□ 0.29
LMNA-220ENST00000504687 LARP1Q6PKG0 1096 aaKnown RBP16.87■□□□□ 0.29
LMNA-220ENST00000504687 ITPRIPQ8IWB1 547 aa16.87■□□□□ 0.29
LMNA-220ENST00000504687 UBR2Q8IWV8 1755 aa16.87■□□□□ 0.29
LMNA-220ENST00000504687 TCERG1O14776 1098 aaKnown RBP16.86■□□□□ 0.29
LMNA-220ENST00000504687 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
LMNA-220ENST00000504687 ERVV-2B6SEH9 535 aa16.85■□□□□ 0.29
LMNA-220ENST00000504687 RWDD1Q9H446 243 aaPredicted RBP16.85■□□□□ 0.29
LMNA-220ENST00000504687 TSHZ2Q9NRE2 1034 aa16.85■□□□□ 0.29
LMNA-220ENST00000504687 BTG4Q9NY30 223 aa16.85■□□□□ 0.29
LMNA-220ENST00000504687 PCDHB15Q9Y5E8 787 aa16.85■□□□□ 0.29
LMNA-220ENST00000504687 LAMB4A4D0S4 1761 aa16.84■□□□□ 0.29
LMNA-220ENST00000504687 JCADQ9P266 1359 aa16.84■□□□□ 0.29
LMNA-220ENST00000504687 SLIT2O94813 1529 aa16.84■□□□□ 0.29
LMNA-220ENST00000504687 GIGYF1O75420 1035 aaPredicted RBP16.83■□□□□ 0.28
LMNA-220ENST00000504687 IGHDP01880 384 aa16.83■□□□□ 0.28
LMNA-220ENST00000504687 GLI3P10071 1580 aa16.83■□□□□ 0.28
LMNA-220ENST00000504687 HDGFL1Q5TGJ6 251 aa16.83■□□□□ 0.28
LMNA-220ENST00000504687 ZNF790Q6PG37 636 aa16.83■□□□□ 0.28
LMNA-220ENST00000504687 CDCA7Q9BWT1 371 aaPredicted RBP16.83■□□□□ 0.28
LMNA-220ENST00000504687 THRAP3Q9Y2W1 955 aaKnown RBP16.83■□□□□ 0.28
LMNA-220ENST00000504687 IBTKQ9P2D0 1353 aaPredicted RBP16.82■□□□□ 0.28
LMNA-220ENST00000504687 CCT4P50991 539 aaKnown RBP16.82■□□□□ 0.28
LMNA-220ENST00000504687 C5P01031 1676 aa16.81■□□□□ 0.28
LMNA-220ENST00000504687 FLIIQ13045 1269 aa16.81■□□□□ 0.28
LMNA-220ENST00000504687 STRN4Q9NRL3 753 aa16.81■□□□□ 0.28
LMNA-220ENST00000504687 TOGARAM1Q9Y4F4 1720 aa16.81■□□□□ 0.28
LMNA-220ENST00000504687 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.8■□□□□ 0.28
LMNA-220ENST00000504687 KCNQ3O43525 872 aa16.8■□□□□ 0.28
LMNA-220ENST00000504687 DBF4Q9UBU7 674 aaPredicted RBP16.8■□□□□ 0.28
LMNA-220ENST00000504687 TNS2Q63HR2 1409 aa16.79■□□□□ 0.28
LMNA-220ENST00000504687 G2E3Q7L622 706 aa16.79■□□□□ 0.28
LMNA-220ENST00000504687 SMC5Q8IY18 1101 aa16.79■□□□□ 0.28
LMNA-220ENST00000504687 NFATC2IPQ8NCF5 419 aa16.79■□□□□ 0.28
LMNA-220ENST00000504687 NUTM2BA6NNL0 878 aaPredicted RBP16.78■□□□□ 0.28
LMNA-220ENST00000504687 NUTM2EB1AL46 878 aaPredicted RBP16.78■□□□□ 0.28
LMNA-220ENST00000504687 CABP4P57796 275 aa16.78■□□□□ 0.28
LMNA-220ENST00000504687 NUTM2AQ8IVF1 878 aaPredicted RBP16.78■□□□□ 0.28
LMNA-220ENST00000504687 ATP10DQ9P241 1426 aa16.78■□□□□ 0.28
LMNA-220ENST00000504687 SPATA31A6Q5VVP1 1343 aa16.77■□□□□ 0.28
LMNA-220ENST00000504687 ITGB4P16144 1822 aa16.77■□□□□ 0.27
LMNA-220ENST00000504687 KCPQ6ZWJ8 1503 aa16.76■□□□□ 0.27
LMNA-220ENST00000504687 ERBB4Q15303 1308 aa16.76■□□□□ 0.27
LMNA-220ENST00000504687 SPATA31A1Q5TZJ5 1347 aa16.76■□□□□ 0.27
LMNA-220ENST00000504687 FMNL2Q96PY5 1086 aa16.76■□□□□ 0.27
LMNA-220ENST00000504687 HYPKQ9NX55 129 aa16.76■□□□□ 0.27
LMNA-220ENST00000504687 SNRPA1P09661 255 aaKnown RBP16.75■□□□□ 0.27
LMNA-220ENST00000504687 BARGINQ6ZT62 677 aa16.75■□□□□ 0.27
LMNA-220ENST00000504687 RPAP2Q8IXW5 612 aaPredicted RBP16.75■□□□□ 0.27
LMNA-220ENST00000504687 TTC5Q8N0Z6 440 aa16.75■□□□□ 0.27
LMNA-220ENST00000504687 DDX21Q9NR30 783 aaKnown RBP eCLIP16.75■□□□□ 0.27
LMNA-220ENST00000504687 SPATA31A5Q5VU36 1347 aa16.74■□□□□ 0.27
LMNA-220ENST00000504687 SPATA31A7Q8IWB4 1347 aa16.74■□□□□ 0.27
LMNA-220ENST00000504687 FKBP5Q13451 457 aaPredicted RBP16.74■□□□□ 0.27
LMNA-220ENST00000504687 CHPF2Q9P2E5 772 aa16.74■□□□□ 0.27
LMNA-220ENST00000504687 GCC1Q96CN9 775 aa16.73■□□□□ 0.27
LMNA-220ENST00000504687 ZNF496Q96IT1 587 aaPredicted RBP16.73■□□□□ 0.27
LMNA-220ENST00000504687 GNAI3P08754 354 aa16.72■□□□□ 0.27
LMNA-220ENST00000504687 EIF2S2P20042 333 aaKnown RBP16.72■□□□□ 0.27
LMNA-220ENST00000504687 CICQ96RK0 1608 aaPredicted RBP16.71■□□□□ 0.27
LMNA-220ENST00000504687 EXOC5O00471 708 aa16.71■□□□□ 0.27
LMNA-220ENST00000504687 ADAMTS2O95450 1211 aa16.71■□□□□ 0.27
LMNA-220ENST00000504687 SLC39A6Q13433 755 aa16.71■□□□□ 0.27
LMNA-220ENST00000504687 PDIA6Q15084 440 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms