RNA–Protein interactions for RNA: ENST00000502548.5

RACK1-202, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,090 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-202ENST00000502548 MYBBP1AQ9BQG0 1328 aaKnown RBP17.27■□□□□ 0.36
RACK1-202ENST00000502548 ITPK1Q13572 414 aa17.27■□□□□ 0.36
RACK1-202ENST00000502548 FLAD1Q8NFF5 587 aa17.27■□□□□ 0.36
RACK1-202ENST00000502548 IL17REQ8NFR9 667 aa17.27■□□□□ 0.36
RACK1-202ENST00000502548 PNNQ9H307 717 aaKnown RBP17.27■□□□□ 0.36
RACK1-202ENST00000502548 DOT1LQ8TEK3 1739 aa17.27■□□□□ 0.35
RACK1-202ENST00000502548 NEFMP07197 916 aa17.26■□□□□ 0.35
RACK1-202ENST00000502548 SLC4A9Q96Q91 983 aa17.26■□□□□ 0.35
RACK1-202ENST00000502548 PRKRIP1Q9H875 184 aaPredicted RBP17.26■□□□□ 0.35
RACK1-202ENST00000502548 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
RACK1-202ENST00000502548 PTGER2P43116 358 aa17.25■□□□□ 0.35
RACK1-202ENST00000502548 COL23A1Q86Y22 540 aaPredicted RBP17.25■□□□□ 0.35
RACK1-202ENST00000502548 LINC00116Q8NCU8 138 aa17.25■□□□□ 0.35
RACK1-202ENST00000502548 AK7Q96M32 723 aa17.25■□□□□ 0.35
RACK1-202ENST00000502548 SRCAPQ6ZRS2 3230 aa17.24■□□□□ 0.35
RACK1-202ENST00000502548 PPP1R1BQ9UD71 204 aaPredicted RBP17.24■□□□□ 0.35
RACK1-202ENST00000502548 MAP3K5Q99683 1374 aa17.24■□□□□ 0.35
RACK1-202ENST00000502548 MSH5O43196 834 aa17.23■□□□□ 0.35
RACK1-202ENST00000502548 HTATSF1O43719 755 aaKnown RBP17.23■□□□□ 0.35
RACK1-202ENST00000502548 TEFQ10587 303 aa17.23■□□□□ 0.35
RACK1-202ENST00000502548 RTF1Q92541 710 aaKnown RBP17.23■□□□□ 0.35
RACK1-202ENST00000502548 PLEKHF1Q96S99 279 aa17.23■□□□□ 0.35
RACK1-202ENST00000502548 SLC39A6Q13433 755 aa17.22■□□□□ 0.35
RACK1-202ENST00000502548 RC3H1Q5TC82 1133 aaKnown RBP17.22■□□□□ 0.35
RACK1-202ENST00000502548 SGIP1Q9BQI5 828 aa17.22■□□□□ 0.35
RACK1-202ENST00000502548 TOGARAM1Q9Y4F4 1720 aa17.21■□□□□ 0.35
RACK1-202ENST00000502548 PAPPAQ13219 1627 aa17.21■□□□□ 0.35
RACK1-202ENST00000502548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.2■□□□□ 0.34
RACK1-202ENST00000502548 SSFA2P28290 1259 aa17.2■□□□□ 0.34
RACK1-202ENST00000502548 GNPATO15228 680 aa17.19■□□□□ 0.34
RACK1-202ENST00000502548 RTCBQ9Y3I0 505 aaKnown RBP17.19■□□□□ 0.34
RACK1-202ENST00000502548 CEMIPQ8WUJ3 1361 aa17.18■□□□□ 0.34
RACK1-202ENST00000502548 PHF14O94880 888 aa17.18■□□□□ 0.34
RACK1-202ENST00000502548 POLD1P28340 1107 aa17.18■□□□□ 0.34
RACK1-202ENST00000502548 TRAPPC3LQ5T215 181 aa17.18■□□□□ 0.34
RACK1-202ENST00000502548 ZNF790Q6PG37 636 aa17.18■□□□□ 0.34
RACK1-202ENST00000502548 AMIGO3Q86WK7 504 aa17.18■□□□□ 0.34
RACK1-202ENST00000502548 TTC5Q8N0Z6 440 aa17.18■□□□□ 0.34
RACK1-202ENST00000502548 VSIG10Q8N0Z9 540 aa17.18■□□□□ 0.34
RACK1-202ENST00000502548 LY75O60449 1722 aa17.18■□□□□ 0.34
RACK1-202ENST00000502548 LRP5O75197 1615 aa17.18■□□□□ 0.34
RACK1-202ENST00000502548 RPS6KA4O75676 772 aa17.17■□□□□ 0.34
RACK1-202ENST00000502548 NFE2L2Q16236 605 aa17.17■□□□□ 0.34
RACK1-202ENST00000502548 SMIM5Q71RC9 77 aa17.17■□□□□ 0.34
RACK1-202ENST00000502548 MCM10Q7L590 875 aa17.17■□□□□ 0.34
RACK1-202ENST00000502548 ARXQ96QS3 562 aa17.17■□□□□ 0.34
RACK1-202ENST00000502548 CNTNAP4Q9C0A0 1308 aa17.17■□□□□ 0.34
RACK1-202ENST00000502548 MAPK8IP3Q9UPT6 1336 aa17.17■□□□□ 0.34
RACK1-202ENST00000502548 BTBD11A6QL63 1104 aa17.16■□□□□ 0.34
RACK1-202ENST00000502548 DCTN1Q14203 1278 aa17.16■□□□□ 0.34
RACK1-202ENST00000502548 WDR43Q15061 677 aaKnown RBP eCLIP17.16■□□□□ 0.34
RACK1-202ENST00000502548 DNAJC10Q8IXB1 793 aa17.16■□□□□ 0.34
RACK1-202ENST00000502548 ITGB4P16144 1822 aa17.15■□□□□ 0.34
RACK1-202ENST00000502548 ADRA2BP18089 450 aa17.15■□□□□ 0.34
RACK1-202ENST00000502548 CRKLP46109 303 aaKnown RBP17.15■□□□□ 0.34
RACK1-202ENST00000502548 TAF7Q15545 349 aaPredicted RBP17.15■□□□□ 0.34
RACK1-202ENST00000502548 ZNF496Q96IT1 587 aaPredicted RBP17.15■□□□□ 0.34
RACK1-202ENST00000502548 ADAMTS8Q9UP79 889 aa17.15■□□□□ 0.34
RACK1-202ENST00000502548 MRC1P22897 1456 aa17.14■□□□□ 0.33
RACK1-202ENST00000502548 INTS5Q6P9B9 1019 aaKnown RBP17.14■□□□□ 0.33
RACK1-202ENST00000502548 ARHGEF1Q92888 912 aaKnown RBP17.14■□□□□ 0.33
RACK1-202ENST00000502548 TEX13AQ9BXU3 409 aaPredicted RBP17.14■□□□□ 0.33
RACK1-202ENST00000502548 STARD3NLO95772 234 aa17.13■□□□□ 0.33
RACK1-202ENST00000502548 CYP19A1P11511 503 aaPredicted RBP17.13■□□□□ 0.33
RACK1-202ENST00000502548 FMNL2Q96PY5 1086 aa17.13■□□□□ 0.33
RACK1-202ENST00000502548 SYT17Q9BSW7 474 aa17.13■□□□□ 0.33
RACK1-202ENST00000502548 FHDC1Q9C0D6 1143 aaPredicted RBP17.13■□□□□ 0.33
RACK1-202ENST00000502548 CASZ1Q86V15 1759 aa17.12■□□□□ 0.33
RACK1-202ENST00000502548 ANP32CO43423 234 aa17.12■□□□□ 0.33
RACK1-202ENST00000502548 KCNQ3O43525 872 aa17.12■□□□□ 0.33
RACK1-202ENST00000502548 RFC4P35249 363 aa17.12■□□□□ 0.33
RACK1-202ENST00000502548 RIPK4P57078 832 aa17.12■□□□□ 0.33
RACK1-202ENST00000502548 MSL1Q68DK7 614 aa17.12■□□□□ 0.33
RACK1-202ENST00000502548 RUNDC1Q96C34 613 aa17.12■□□□□ 0.33
RACK1-202ENST00000502548 CCDC87Q9NVE4 849 aa17.12■□□□□ 0.33
RACK1-202ENST00000502548 TMPOP42166 694 aaKnown RBP17.11■□□□□ 0.33
RACK1-202ENST00000502548 NLGN1Q8N2Q7 840 aa17.1■□□□□ 0.33
RACK1-202ENST00000502548 PNISRQ8TF01 805 aaKnown RBP17.1■□□□□ 0.33
RACK1-202ENST00000502548 CCDC146Q8IYE0 955 aa17.09■□□□□ 0.33
RACK1-202ENST00000502548 HEG1Q9ULI3 1381 aa17.09■□□□□ 0.33
RACK1-202ENST00000502548 C4BP0C0L5 1744 aa17.09■□□□□ 0.33
RACK1-202ENST00000502548 ADAMTS7Q9UKP4 1686 aa17.08■□□□□ 0.32
RACK1-202ENST00000502548 DCAF8L1A6NGE4 600 aa17.08■□□□□ 0.32
RACK1-202ENST00000502548 LMOD3Q0VAK6 560 aa17.08■□□□□ 0.32
RACK1-202ENST00000502548 THUMPD2Q9BTF0 503 aaKnown RBP17.08■□□□□ 0.32
RACK1-202ENST00000502548 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.32
RACK1-202ENST00000502548 SNRPA1P09661 255 aaKnown RBP17.07■□□□□ 0.32
RACK1-202ENST00000502548 ZBTB1Q9Y2K1 713 aa17.07■□□□□ 0.32
RACK1-202ENST00000502548 SCN11AQ9UI33 1791 aa17.07■□□□□ 0.32
RACK1-202ENST00000502548 C5P01031 1676 aa17.07■□□□□ 0.32
RACK1-202ENST00000502548 GYS1P13807 737 aa17.06■□□□□ 0.32
RACK1-202ENST00000502548 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
RACK1-202ENST00000502548 NEUROD2Q15784 382 aa17.06■□□□□ 0.32
RACK1-202ENST00000502548 CCDC184Q52MB2 194 aa17.06■□□□□ 0.32
RACK1-202ENST00000502548 RRP7AQ9Y3A4 280 aaKnown RBP17.06■□□□□ 0.32
RACK1-202ENST00000502548 KCPQ6ZWJ8 1503 aa17.06■□□□□ 0.32
RACK1-202ENST00000502548 SOS1Q07889 1333 aaPredicted RBP17.05■□□□□ 0.32
RACK1-202ENST00000502548 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
RACK1-202ENST00000502548 CD2APQ9Y5K6 639 aa17.05■□□□□ 0.32
RACK1-202ENST00000502548 USP16Q9Y5T5 823 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms