RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 PKD1L3Q7Z443 1732 aa19.28■□□□□ 0.68
CLDND1-206ENST00000502299 GRIN3BO60391 1043 aa19.27■□□□□ 0.68
CLDND1-206ENST00000502299 HSP90AB1P08238 724 aaKnown RBP19.27■□□□□ 0.68
CLDND1-206ENST00000502299 AMIGO3Q86WK7 504 aa19.27■□□□□ 0.68
CLDND1-206ENST00000502299 PALLDQ8WX93 1383 aa19.27■□□□□ 0.68
CLDND1-206ENST00000502299 COL3A1P02461 1466 aaPredicted RBP19.27■□□□□ 0.67
CLDND1-206ENST00000502299 C1orf141Q5JVX7 400 aa19.25■□□□□ 0.67
CLDND1-206ENST00000502299 ZNF530Q6P9A1 599 aaPredicted RBP19.25■□□□□ 0.67
CLDND1-206ENST00000502299 CEP350Q5VT06 3117 aa19.25■□□□□ 0.67
CLDND1-206ENST00000502299 SMIM5Q71RC9 77 aa19.23■□□□□ 0.67
CLDND1-206ENST00000502299 FLAD1Q8NFF5 587 aa19.23■□□□□ 0.67
CLDND1-206ENST00000502299 DCAF5Q96JK2 942 aa19.23■□□□□ 0.67
CLDND1-206ENST00000502299 CD2APQ9Y5K6 639 aa19.23■□□□□ 0.67
CLDND1-206ENST00000502299 C5P01031 1676 aa19.23■□□□□ 0.67
CLDND1-206ENST00000502299 U2AF1L5P0DN76 240 aaPredicted RBP19.22■□□□□ 0.67
CLDND1-206ENST00000502299 U2AF1Q01081 240 aaKnown RBP eCLIP19.22■□□□□ 0.67
CLDND1-206ENST00000502299 PIGBQ92521 554 aa19.22■□□□□ 0.67
CLDND1-206ENST00000502299 ERVV-2B6SEH9 535 aa19.21■□□□□ 0.67
CLDND1-206ENST00000502299 AKAP4Q5JQC9 854 aa19.21■□□□□ 0.67
CLDND1-206ENST00000502299 MYBBP1AQ9BQG0 1328 aaKnown RBP19.21■□□□□ 0.67
CLDND1-206ENST00000502299 TOGARAM1Q9Y4F4 1720 aa19.2■□□□□ 0.66
CLDND1-206ENST00000502299 FCHSD2O94868 740 aa19.2■□□□□ 0.66
CLDND1-206ENST00000502299 TMOD3Q9NYL9 352 aa19.2■□□□□ 0.66
CLDND1-206ENST00000502299 ATP10DQ9P241 1426 aa19.19■□□□□ 0.66
CLDND1-206ENST00000502299 MTHFSDQ2M296 383 aaKnown RBP19.19■□□□□ 0.66
CLDND1-206ENST00000502299 SMARCC1Q92922 1105 aaPredicted RBP19.19■□□□□ 0.66
CLDND1-206ENST00000502299 PRKRIP1Q9H875 184 aaPredicted RBP19.19■□□□□ 0.66
CLDND1-206ENST00000502299 C4BP0C0L5 1744 aa19.18■□□□□ 0.66
CLDND1-206ENST00000502299 PHF14O94880 888 aa19.18■□□□□ 0.66
CLDND1-206ENST00000502299 HMGB2P26583 209 aaKnown RBP19.18■□□□□ 0.66
CLDND1-206ENST00000502299 AK7Q96M32 723 aa19.18■□□□□ 0.66
CLDND1-206ENST00000502299 RSPH6AQ9H0K4 717 aa19.18■□□□□ 0.66
CLDND1-206ENST00000502299 TAF1LQ8IZX4 1826 aa19.17■□□□□ 0.66
CLDND1-206ENST00000502299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.17■□□□□ 0.66
CLDND1-206ENST00000502299 PRKAR2BP31323 418 aa19.17■□□□□ 0.66
CLDND1-206ENST00000502299 LINC00116Q8NCU8 138 aa19.17■□□□□ 0.66
CLDND1-206ENST00000502299 GAS2L2Q8NHY3 880 aa19.17■□□□□ 0.66
CLDND1-206ENST00000502299 CABP4P57796 275 aa19.16■□□□□ 0.66
CLDND1-206ENST00000502299 LOC102724428A0A0B4J2F2 783 aa19.15■□□□□ 0.66
CLDND1-206ENST00000502299 SIK1P57059 783 aa19.15■□□□□ 0.66
CLDND1-206ENST00000502299 PNNQ9H307 717 aaKnown RBP19.15■□□□□ 0.66
CLDND1-206ENST00000502299 WWC3Q9ULE0 1092 aa19.15■□□□□ 0.66
CLDND1-206ENST00000502299 ADCY9O60503 1353 aa19.15■□□□□ 0.66
CLDND1-206ENST00000502299 NEFMP07197 916 aa19.14■□□□□ 0.65
CLDND1-206ENST00000502299 ITPK1Q13572 414 aa19.14■□□□□ 0.65
CLDND1-206ENST00000502299 PHACTR3Q96KR7 559 aa19.14■□□□□ 0.65
CLDND1-206ENST00000502299 ASAP1Q9ULH1 1129 aa19.14■□□□□ 0.65
CLDND1-206ENST00000502299 ITGB4P16144 1822 aa19.14■□□□□ 0.65
CLDND1-206ENST00000502299 SSFA2P28290 1259 aa19.13■□□□□ 0.65
CLDND1-206ENST00000502299 NFATC2IPQ8NCF5 419 aa19.13■□□□□ 0.65
CLDND1-206ENST00000502299 KDM6AO15550 1401 aaPredicted RBP19.13■□□□□ 0.65
CLDND1-206ENST00000502299 GNAT3A8MTJ3 354 aa19.12■□□□□ 0.65
CLDND1-206ENST00000502299 RNMTO43148 476 aaKnown RBP19.12■□□□□ 0.65
CLDND1-206ENST00000502299 LGR6Q9HBX8 967 aa19.12■□□□□ 0.65
CLDND1-206ENST00000502299 GPBP1L1Q9HC44 474 aaPredicted RBP19.12■□□□□ 0.65
CLDND1-206ENST00000502299 UBR3Q6ZT12 1888 aa19.11■□□□□ 0.65
CLDND1-206ENST00000502299 ATG3Q9NT62 314 aa19.11■□□□□ 0.65
CLDND1-206ENST00000502299 GNPATO15228 680 aa19.1■□□□□ 0.65
CLDND1-206ENST00000502299 ATP6V1AP38606 617 aa19.1■□□□□ 0.65
CLDND1-206ENST00000502299 ZNF526Q8TF50 670 aaPredicted RBP19.1■□□□□ 0.65
CLDND1-206ENST00000502299 ANP32CO43423 234 aa19.09■□□□□ 0.65
CLDND1-206ENST00000502299 SLC52A2Q9HAB3 445 aa19.09■□□□□ 0.65
CLDND1-206ENST00000502299 PLEKHF1Q96S99 279 aa19.08■□□□□ 0.64
CLDND1-206ENST00000502299 IL17REQ8NFR9 667 aa19.07■□□□□ 0.64
CLDND1-206ENST00000502299 SLC4A9Q96Q91 983 aa19.07■□□□□ 0.64
CLDND1-206ENST00000502299 WDR43Q15061 677 aaKnown RBP eCLIP19.06■□□□□ 0.64
CLDND1-206ENST00000502299 RTF1Q92541 710 aaKnown RBP19.06■□□□□ 0.64
CLDND1-206ENST00000502299 SCN11AQ9UI33 1791 aa19.06■□□□□ 0.64
CLDND1-206ENST00000502299 HTATSF1O43719 755 aaKnown RBP19.05■□□□□ 0.64
CLDND1-206ENST00000502299 MMP10P09238 476 aa19.05■□□□□ 0.64
CLDND1-206ENST00000502299 TEFQ10587 303 aa19.05■□□□□ 0.64
CLDND1-206ENST00000502299 RBM42Q9BTD8 480 aaKnown RBP19.05■□□□□ 0.64
CLDND1-206ENST00000502299 MAPK8IP3Q9UPT6 1336 aa19.04■□□□□ 0.64
CLDND1-206ENST00000502299 IFFO2Q5TF58 517 aa19.04■□□□□ 0.64
CLDND1-206ENST00000502299 HSPA6P17066 643 aa19.03■□□□□ 0.64
CLDND1-206ENST00000502299 PXDNLA1KZ92 1463 aa19.03■□□□□ 0.64
CLDND1-206ENST00000502299 KIF3CO14782 793 aa19.02■□□□□ 0.64
CLDND1-206ENST00000502299 TRAPPC3LQ5T215 181 aa19.02■□□□□ 0.64
CLDND1-206ENST00000502299 ADAMTS7Q9UKP4 1686 aa19.01■□□□□ 0.63
CLDND1-206ENST00000502299 PTCD1O75127 700 aaKnown RBP19.01■□□□□ 0.63
CLDND1-206ENST00000502299 NFE2L2Q16236 605 aa19.01■□□□□ 0.63
CLDND1-206ENST00000502299 ADAMTS8Q9UP79 889 aa19.01■□□□□ 0.63
CLDND1-206ENST00000502299 RTCBQ9Y3I0 505 aaKnown RBP19.01■□□□□ 0.63
CLDND1-206ENST00000502299 ARHGEF1Q92888 912 aaKnown RBP19■□□□□ 0.63
CLDND1-206ENST00000502299 CEMIPQ8WUJ3 1361 aa19■□□□□ 0.63
CLDND1-206ENST00000502299 MRC1P22897 1456 aa19■□□□□ 0.63
CLDND1-206ENST00000502299 A0A0G2JLW4 131 aa18.99■□□□□ 0.63
CLDND1-206ENST00000502299 SLC39A6Q13433 755 aa18.99■□□□□ 0.63
CLDND1-206ENST00000502299 MCM10Q7L590 875 aa18.99■□□□□ 0.63
CLDND1-206ENST00000502299 NLGN1Q8N2Q7 840 aa18.99■□□□□ 0.63
CLDND1-206ENST00000502299 CICQ96RK0 1608 aaPredicted RBP18.99■□□□□ 0.63
CLDND1-206ENST00000502299 TGFB2P61812 414 aa18.98■□□□□ 0.63
CLDND1-206ENST00000502299 RC3H1Q5TC82 1133 aaKnown RBP18.98■□□□□ 0.63
CLDND1-206ENST00000502299 TTC5Q8N0Z6 440 aa18.98■□□□□ 0.63
CLDND1-206ENST00000502299 RUNDC1Q96C34 613 aa18.98■□□□□ 0.63
CLDND1-206ENST00000502299 C10orf71Q711Q0 1435 aa18.98■□□□□ 0.63
CLDND1-206ENST00000502299 BTBD11A6QL63 1104 aa18.97■□□□□ 0.63
CLDND1-206ENST00000502299 GYS1P13807 737 aa18.97■□□□□ 0.63
CLDND1-206ENST00000502299 DCTN1Q14203 1278 aa18.97■□□□□ 0.63
CLDND1-206ENST00000502299 BCS1LQ9Y276 419 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms