RNA–Protein interactions for RNA: ENST00000502288.5

CLDND1-205, Transcript of claudin domain containing 1, humanhuman

TSL 4 BASIC

Gene CLDND1, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-205ENST00000502288 LINC00116Q8NCU8 138 aa11.46□□□□□ -0.57
CLDND1-205ENST00000502288 COG3Q96JB2 828 aa11.46□□□□□ -0.57
CLDND1-205ENST00000502288 RRAGCQ9HB90 399 aa11.46□□□□□ -0.57
CLDND1-205ENST00000502288 CCDC88AQ3V6T2 1871 aa11.46□□□□□ -0.58
CLDND1-205ENST00000502288 LOC102724428A0A0B4J2F2 783 aa11.45□□□□□ -0.58
CLDND1-205ENST00000502288 CYP27B1O15528 508 aa11.45□□□□□ -0.58
CLDND1-205ENST00000502288 DPEP1P16444 411 aa11.45□□□□□ -0.58
CLDND1-205ENST00000502288 KCNA3P22001 575 aa11.45□□□□□ -0.58
CLDND1-205ENST00000502288 SIK1P57059 783 aa11.45□□□□□ -0.58
CLDND1-205ENST00000502288 PIGBQ92521 554 aa11.45□□□□□ -0.58
CLDND1-205ENST00000502288 SMG6Q86US8 1419 aaKnown RBP11.44□□□□□ -0.58
CLDND1-205ENST00000502288 COL5A3P25940 1745 aaPredicted RBP11.44□□□□□ -0.58
CLDND1-205ENST00000502288 ZC3H4Q9UPT8 1303 aaKnown RBP11.44□□□□□ -0.58
CLDND1-205ENST00000502288 CCDC87Q9NVE4 849 aa11.44□□□□□ -0.58
CLDND1-205ENST00000502288 PCDH10Q9P2E7 1040 aa11.44□□□□□ -0.58
CLDND1-205ENST00000502288 GNPATO15228 680 aa11.43□□□□□ -0.58
CLDND1-205ENST00000502288 TMF1P82094 1093 aa11.43□□□□□ -0.58
CLDND1-205ENST00000502288 DCAF5Q96JK2 942 aa11.43□□□□□ -0.58
CLDND1-205ENST00000502288 PIM2Q9P1W9 311 aa11.43□□□□□ -0.58
CLDND1-205ENST00000502288 KIF24Q5T7B8 1368 aa11.42□□□□□ -0.58
CLDND1-205ENST00000502288 FBLN1P23142 703 aa11.42□□□□□ -0.58
CLDND1-205ENST00000502288 ITPK1Q13572 414 aa11.42□□□□□ -0.58
CLDND1-205ENST00000502288 TRAPPC3LQ5T215 181 aa11.42□□□□□ -0.58
CLDND1-205ENST00000502288 USHBP1Q8N6Y0 703 aa11.42□□□□□ -0.58
CLDND1-205ENST00000502288 INSRP06213 1382 aa11.41□□□□□ -0.58
CLDND1-205ENST00000502288 MYH14Q7Z406 1995 aaKnown RBP11.41□□□□□ -0.58
CLDND1-205ENST00000502288 ADRA2BP18089 450 aa11.41□□□□□ -0.58
CLDND1-205ENST00000502288 ATP6V1AP38606 617 aa11.41□□□□□ -0.58
CLDND1-205ENST00000502288 RNF181Q9P0P0 153 aa11.41□□□□□ -0.58
CLDND1-205ENST00000502288 RTCBQ9Y3I0 505 aaKnown RBP11.41□□□□□ -0.58
CLDND1-205ENST00000502288 GYS1P13807 737 aa11.4□□□□□ -0.58
CLDND1-205ENST00000502288 VEGFAP15692 232 aaPredicted RBP11.4□□□□□ -0.58
CLDND1-205ENST00000502288 DALRD3Q5D0E6 543 aaKnown RBP11.4□□□□□ -0.58
CLDND1-205ENST00000502288 RC3H1Q5TC82 1133 aaKnown RBP11.4□□□□□ -0.58
CLDND1-205ENST00000502288 PARP3Q9Y6F1 533 aa11.4□□□□□ -0.58
CLDND1-205ENST00000502288 KDM6AO15550 1401 aaPredicted RBP11.4□□□□□ -0.58
CLDND1-205ENST00000502288 NCAPD2Q15021 1401 aa11.4□□□□□ -0.58
CLDND1-205ENST00000502288 DICER1Q9UPY3 1922 aaKnown RBP11.4□□□□□ -0.58
CLDND1-205ENST00000502288 DLEC1Q9Y238 1755 aa11.39□□□□□ -0.59
CLDND1-205ENST00000502288 TIAM2Q8IVF5 1701 aa11.39□□□□□ -0.59
CLDND1-205ENST00000502288 ARHGEF1Q92888 912 aaKnown RBP11.39□□□□□ -0.59
CLDND1-205ENST00000502288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.39□□□□□ -0.59
CLDND1-205ENST00000502288 TMOD3Q9NYL9 352 aa11.39□□□□□ -0.59
CLDND1-205ENST00000502288 KIF20BQ96Q89 1820 aa11.38□□□□□ -0.59
CLDND1-205ENST00000502288 GLTPD2A6NH11 291 aa11.38□□□□□ -0.59
CLDND1-205ENST00000502288 RRS1Q15050 365 aaKnown RBP11.38□□□□□ -0.59
CLDND1-205ENST00000502288 HSP90AB2PQ58FF8 381 aa11.38□□□□□ -0.59
CLDND1-205ENST00000502288 PRDM10Q9NQV6 1147 aa11.38□□□□□ -0.59
CLDND1-205ENST00000502288 ASAP1Q9ULH1 1129 aa11.38□□□□□ -0.59
CLDND1-205ENST00000502288 SPG7Q9UQ90 795 aa11.38□□□□□ -0.59
CLDND1-205ENST00000502288 KDRP35968 1356 aa11.38□□□□□ -0.59
CLDND1-205ENST00000502288 VIRMAQ69YN4 1812 aaKnown RBP11.37□□□□□ -0.59
CLDND1-205ENST00000502288 RPS6KA4O75676 772 aa11.37□□□□□ -0.59
CLDND1-205ENST00000502288 ATG3Q9NT62 314 aa11.37□□□□□ -0.59
CLDND1-205ENST00000502288 FLT4P35916 1363 aa11.37□□□□□ -0.59
CLDND1-205ENST00000502288 CNTNAP4Q9C0A0 1308 aa11.36□□□□□ -0.59
CLDND1-205ENST00000502288 ANKRD26Q9UPS8 1709 aa11.36□□□□□ -0.59
CLDND1-205ENST00000502288 FYB1O15117 783 aa11.36□□□□□ -0.59
CLDND1-205ENST00000502288 RFC4P35249 363 aa11.36□□□□□ -0.59
CLDND1-205ENST00000502288 AFDNP55196 1824 aaKnown RBP11.36□□□□□ -0.59
CLDND1-205ENST00000502288 TONSLQ96HA7 1378 aa11.36□□□□□ -0.59
CLDND1-205ENST00000502288 SLC24A1O60721 1099 aa11.35□□□□□ -0.59
CLDND1-205ENST00000502288 IFNL2Q8IZJ0 200 aa11.35□□□□□ -0.59
CLDND1-205ENST00000502288 CARD11Q9BXL7 1154 aa11.35□□□□□ -0.59
CLDND1-205ENST00000502288 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
CLDND1-205ENST00000502288 ADAMTS7Q9UKP4 1686 aa11.34□□□□□ -0.59
CLDND1-205ENST00000502288 LMNB1P20700 586 aa11.34□□□□□ -0.59
CLDND1-205ENST00000502288 SLC4A9Q96Q91 983 aa11.34□□□□□ -0.59
CLDND1-205ENST00000502288 NRXN2Q9P2S2 1712 aa11.34□□□□□ -0.59
CLDND1-205ENST00000502288 POTECB2RU33 542 aa11.33□□□□□ -0.6
CLDND1-205ENST00000502288 FOXN1O15353 648 aa11.33□□□□□ -0.6
CLDND1-205ENST00000502288 PHKG2P15735 406 aa11.33□□□□□ -0.6
CLDND1-205ENST00000502288 FER1L6Q2WGJ9 1857 aa11.32□□□□□ -0.6
CLDND1-205ENST00000502288 ERVV-2B6SEH9 535 aa11.32□□□□□ -0.6
CLDND1-205ENST00000502288 CHRNA5P30532 468 aa11.32□□□□□ -0.6
CLDND1-205ENST00000502288 SIN3AQ96ST3 1273 aa11.32□□□□□ -0.6
CLDND1-205ENST00000502288 GGNBP2Q9H3C7 697 aa11.32□□□□□ -0.6
CLDND1-205ENST00000502288 TM4SF1P30408 202 aa11.31□□□□□ -0.6
CLDND1-205ENST00000502288 CTCFP49711 727 aaPredicted RBP11.31□□□□□ -0.6
CLDND1-205ENST00000502288 DDR1Q08345 913 aa11.31□□□□□ -0.6
CLDND1-205ENST00000502288 DPY19L2Q6NUT2 758 aa11.31□□□□□ -0.6
CLDND1-205ENST00000502288 TESK2Q96S53 571 aa11.31□□□□□ -0.6
CLDND1-205ENST00000502288 USP42Q9H9J4 1324 aaKnown RBP11.31□□□□□ -0.6
CLDND1-205ENST00000502288 SCN4AP35499 1836 aa11.3□□□□□ -0.6
CLDND1-205ENST00000502288 TJP1Q07157 1748 aa11.3□□□□□ -0.6
CLDND1-205ENST00000502288 RASSF7Q02833 373 aa11.3□□□□□ -0.6
CLDND1-205ENST00000502288 FKBP8Q14318 412 aa11.3□□□□□ -0.6
CLDND1-205ENST00000502288 CNTNAP1P78357 1384 aa11.29□□□□□ -0.6
CLDND1-205ENST00000502288 POLRMTO00411 1230 aaKnown RBP11.29□□□□□ -0.6
CLDND1-205ENST00000502288 RGS19P49795 217 aa11.29□□□□□ -0.6
CLDND1-205ENST00000502288 CHADLQ6NUI6 762 aa11.29□□□□□ -0.6
CLDND1-205ENST00000502288 RBM42Q9BTD8 480 aaKnown RBP11.29□□□□□ -0.6
CLDND1-205ENST00000502288 MKRN1Q9UHC7 482 aaKnown RBP11.29□□□□□ -0.6
CLDND1-205ENST00000502288 WASHC2AQ641Q2 1341 aa11.29□□□□□ -0.6
CLDND1-205ENST00000502288 FAM161AQ3B820 660 aa11.28□□□□□ -0.6
CLDND1-205ENST00000502288 AIDAQ96BJ3 306 aa11.28□□□□□ -0.6
CLDND1-205ENST00000502288 EYA1Q99502 592 aa11.28□□□□□ -0.6
CLDND1-205ENST00000502288 HSP90AB1P08238 724 aaKnown RBP11.27□□□□□ -0.61
CLDND1-205ENST00000502288 TTLL6Q8N841 843 aa11.27□□□□□ -0.61
CLDND1-205ENST00000502288 ABHD8Q96I13 439 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms