RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 DCAF5Q96JK2 942 aa20.73■□□□□ 0.91
PTK7-220ENST00000497957 CDCA7Q9BWT1 371 aaPredicted RBP20.72■□□□□ 0.91
PTK7-220ENST00000497957 SLC52A2Q9HAB3 445 aa20.72■□□□□ 0.91
PTK7-220ENST00000497957 A0A0G2JS52 829 aa20.71■□□□□ 0.91
PTK7-220ENST00000497957 MYT1Q01538 1121 aa20.71■□□□□ 0.91
PTK7-220ENST00000497957 SLC39A6Q13433 755 aa20.71■□□□□ 0.91
PTK7-220ENST00000497957 NFATC2IPQ8NCF5 419 aa20.71■□□□□ 0.91
PTK7-220ENST00000497957 RGS17Q9UGC6 210 aaPredicted RBP20.71■□□□□ 0.91
PTK7-220ENST00000497957 BTBD11A6QL63 1104 aa20.69■□□□□ 0.9
PTK7-220ENST00000497957 TCERG1O14776 1098 aaKnown RBP20.69■□□□□ 0.9
PTK7-220ENST00000497957 BCAR3O75815 825 aa20.69■□□□□ 0.9
PTK7-220ENST00000497957 HSP90AB1P08238 724 aaKnown RBP20.69■□□□□ 0.9
PTK7-220ENST00000497957 FAM182BQ5T319 152 aa20.69■□□□□ 0.9
PTK7-220ENST00000497957 DOT1LQ8TEK3 1739 aa20.69■□□□□ 0.9
PTK7-220ENST00000497957 CABP4P57796 275 aa20.68■□□□□ 0.9
PTK7-220ENST00000497957 IRX6P78412 446 aaPredicted RBP20.68■□□□□ 0.9
PTK7-220ENST00000497957 BCL2L13Q9BXK5 485 aa20.68■□□□□ 0.9
PTK7-220ENST00000497957 PLIN1O60240 522 aa20.67■□□□□ 0.9
PTK7-220ENST00000497957 VAMP4O75379 141 aa20.67■□□□□ 0.9
PTK7-220ENST00000497957 ACSBG1Q96GR2 724 aa20.67■□□□□ 0.9
PTK7-220ENST00000497957 ITGB4P16144 1822 aa20.67■□□□□ 0.9
PTK7-220ENST00000497957 RARSP54136 660 aaKnown RBP20.66■□□□□ 0.9
PTK7-220ENST00000497957 SEPT12Q8IYM1 358 aa20.66■□□□□ 0.9
PTK7-220ENST00000497957 ONECUT3O60422 494 aaPredicted RBP20.65■□□□□ 0.9
PTK7-220ENST00000497957 EIF4A1P60842 406 aaKnown RBP20.65■□□□□ 0.9
PTK7-220ENST00000497957 TWISTNBQ3B726 338 aaPredicted RBP20.65■□□□□ 0.9
PTK7-220ENST00000497957 ILDR1Q86SU0 546 aaPredicted RBP20.65■□□□□ 0.9
PTK7-220ENST00000497957 RNF123Q5XPI4 1314 aa20.64■□□□□ 0.89
PTK7-220ENST00000497957 PRAMEF22A3QJZ6 481 aa20.64■□□□□ 0.89
PTK7-220ENST00000497957 ERVV-2B6SEH9 535 aa20.64■□□□□ 0.89
PTK7-220ENST00000497957 POTEAQ6S8J7 498 aa20.64■□□□□ 0.89
PTK7-220ENST00000497957 SSH1Q8WYL5 1049 aa20.64■□□□□ 0.89
PTK7-220ENST00000497957 PAPPAQ13219 1627 aa20.64■□□□□ 0.89
PTK7-220ENST00000497957 BRWD3Q6RI45 1802 aa20.63■□□□□ 0.89
PTK7-220ENST00000497957 PTF1AQ7RTS3 328 aa20.63■□□□□ 0.89
PTK7-220ENST00000497957 PIGBQ92521 554 aa20.63■□□□□ 0.89
PTK7-220ENST00000497957 BABAM1Q9NWV8 329 aa20.63■□□□□ 0.89
PTK7-220ENST00000497957 TNNQ9UQP3 1299 aa20.63■□□□□ 0.89
PTK7-220ENST00000497957 PRIM1P49642 420 aaKnown RBP20.62■□□□□ 0.89
PTK7-220ENST00000497957 RRP1P56182 461 aaKnown RBP20.62■□□□□ 0.89
PTK7-220ENST00000497957 ZNF772Q68DY9 489 aaPredicted RBP20.62■□□□□ 0.89
PTK7-220ENST00000497957 NECTIN2Q92692 538 aa20.62■□□□□ 0.89
PTK7-220ENST00000497957 C5P01031 1676 aa20.61■□□□□ 0.89
PTK7-220ENST00000497957 ZNF790Q6PG37 636 aa20.61■□□□□ 0.89
PTK7-220ENST00000497957 KCNQ2O43526 872 aa20.6■□□□□ 0.89
PTK7-220ENST00000497957 SYTL4Q96C24 671 aaPredicted RBP20.6■□□□□ 0.89
PTK7-220ENST00000497957 ZNF496Q96IT1 587 aaPredicted RBP20.6■□□□□ 0.89
PTK7-220ENST00000497957 TMOD3Q9NYL9 352 aa20.6■□□□□ 0.89
PTK7-220ENST00000497957 ASAP1Q9ULH1 1129 aa20.6■□□□□ 0.89
PTK7-220ENST00000497957 KCPQ6ZWJ8 1503 aa20.59■□□□□ 0.89
PTK7-220ENST00000497957 RBM6P78332 1123 aaKnown RBP20.59■□□□□ 0.89
PTK7-220ENST00000497957 C20orf194Q5TEA3 1177 aa20.59■□□□□ 0.89
PTK7-220ENST00000497957 BCL9O00512 1426 aa20.59■□□□□ 0.89
PTK7-220ENST00000497957 HEG1Q9ULI3 1381 aa20.59■□□□□ 0.89
PTK7-220ENST00000497957 ATG3Q9NT62 314 aa20.58■□□□□ 0.89
PTK7-220ENST00000497957 UBR2Q8IWV8 1755 aa20.57■□□□□ 0.88
PTK7-220ENST00000497957 CT47B1P0C2W7 299 aaPredicted RBP20.57■□□□□ 0.88
PTK7-220ENST00000497957 MRPL50Q8N5N7 158 aaKnown RBP20.57■□□□□ 0.88
PTK7-220ENST00000497957 SMC4Q9NTJ3 1288 aa20.57■□□□□ 0.88
PTK7-220ENST00000497957 GTF3C3Q9Y5Q9 886 aa20.56■□□□□ 0.88
PTK7-220ENST00000497957 RGS12O14924 1447 aa20.55■□□□□ 0.88
PTK7-220ENST00000497957 GIGYF1O75420 1035 aaPredicted RBP20.55■□□□□ 0.88
PTK7-220ENST00000497957 PTCD1O75127 700 aaKnown RBP20.54■□□□□ 0.88
PTK7-220ENST00000497957 EIF2S2P20042 333 aaKnown RBP20.54■□□□□ 0.88
PTK7-220ENST00000497957 G2E3Q7L622 706 aa20.54■□□□□ 0.88
PTK7-220ENST00000497957 FRAT1Q92837 279 aaPredicted RBP20.54■□□□□ 0.88
PTK7-220ENST00000497957 KAT6BQ8WYB5 2073 aa20.54■□□□□ 0.88
PTK7-220ENST00000497957 ANXA1P04083 346 aa20.53■□□□□ 0.88
PTK7-220ENST00000497957 RXRBP28702 533 aa20.53■□□□□ 0.88
PTK7-220ENST00000497957 FKBP8Q14318 412 aa20.53■□□□□ 0.88
PTK7-220ENST00000497957 TTC5Q8N0Z6 440 aa20.53■□□□□ 0.88
PTK7-220ENST00000497957 SLC4A9Q96Q91 983 aa20.53■□□□□ 0.88
PTK7-220ENST00000497957 ALDH1L2Q3SY69 923 aa20.52■□□□□ 0.88
PTK7-220ENST00000497957 NOB1Q9ULX3 412 aaKnown RBP20.52■□□□□ 0.88
PTK7-220ENST00000497957 SBF2Q86WG5 1849 aa20.51■□□□□ 0.87
PTK7-220ENST00000497957 HDGFL1Q5TGJ6 251 aa20.51■□□□□ 0.87
PTK7-220ENST00000497957 KRT27Q7Z3Y8 459 aa20.51■□□□□ 0.87
PTK7-220ENST00000497957 FMNL2Q96PY5 1086 aa20.51■□□□□ 0.87
PTK7-220ENST00000497957 USP16Q9Y5T5 823 aa20.51■□□□□ 0.87
PTK7-220ENST00000497957 NHSQ6T4R5 1651 aa20.51■□□□□ 0.87
PTK7-220ENST00000497957 PIP4K2AP48426 406 aaPredicted RBP20.5■□□□□ 0.87
PTK7-220ENST00000497957 PROSER3Q2NL68 480 aa20.5■□□□□ 0.87
PTK7-220ENST00000497957 RLBP1P12271 317 aa20.49■□□□□ 0.87
PTK7-220ENST00000497957 PANK1Q8TE04 598 aa20.49■□□□□ 0.87
PTK7-220ENST00000497957 RBM42Q9BTD8 480 aaKnown RBP20.49■□□□□ 0.87
PTK7-220ENST00000497957 CHPF2Q9P2E5 772 aa20.49■□□□□ 0.87
PTK7-220ENST00000497957 SLC4A2P04920 1241 aa20.48■□□□□ 0.87
PTK7-220ENST00000497957 BTAF1O14981 1849 aa20.48■□□□□ 0.87
PTK7-220ENST00000497957 LAMB4A4D0S4 1761 aa20.47■□□□□ 0.87
PTK7-220ENST00000497957 HOXB7P09629 217 aa20.47■□□□□ 0.87
PTK7-220ENST00000497957 SNRPA1P09661 255 aaKnown RBP20.47■□□□□ 0.87
PTK7-220ENST00000497957 CCDC30Q5VVM6 783 aa20.47■□□□□ 0.87
PTK7-220ENST00000497957 DNAJC10Q8IXB1 793 aa20.47■□□□□ 0.87
PTK7-220ENST00000497957 CLUAP1Q96AJ1 413 aa20.47■□□□□ 0.87
PTK7-220ENST00000497957 ZNF428Q96B54 188 aa20.47■□□□□ 0.87
PTK7-220ENST00000497957 CRBNQ96SW2 442 aa20.47■□□□□ 0.87
PTK7-220ENST00000497957 TJP1Q07157 1748 aa20.47■□□□□ 0.87
PTK7-220ENST00000497957 CANXP27824 592 aaKnown RBP20.46■□□□□ 0.87
PTK7-220ENST00000497957 EXOC6Q8TAG9 804 aa20.46■□□□□ 0.87
PTK7-220ENST00000497957 PHAXQ9H814 394 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms