RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 TGFB2P61812 414 aa13.84□□□□□ -0.19
SRSF4-205ENST00000497015 FSTL1Q12841 308 aa13.84□□□□□ -0.19
SRSF4-205ENST00000497015 ITPK1Q13572 414 aa13.84□□□□□ -0.19
SRSF4-205ENST00000497015 UBR3Q6ZT12 1888 aa13.84□□□□□ -0.19
SRSF4-205ENST00000497015 RRS1Q15050 365 aaKnown RBP13.83□□□□□ -0.2
SRSF4-205ENST00000497015 C9orf131Q5VYM1 1079 aa13.83□□□□□ -0.2
SRSF4-205ENST00000497015 RRAGCQ9HB90 399 aa13.83□□□□□ -0.2
SRSF4-205ENST00000497015 ROCK2O75116 1388 aaKnown RBP13.83□□□□□ -0.2
SRSF4-205ENST00000497015 VASPP50552 380 aaPredicted RBP13.82□□□□□ -0.2
SRSF4-205ENST00000497015 CGNL1Q0VF96 1302 aa13.82□□□□□ -0.2
SRSF4-205ENST00000497015 N4BP2Q86UW6 1770 aaPredicted RBP13.81□□□□□ -0.2
SRSF4-205ENST00000497015 LOC102724428A0A0B4J2F2 783 aa13.81□□□□□ -0.2
SRSF4-205ENST00000497015 SIK1P57059 783 aa13.81□□□□□ -0.2
SRSF4-205ENST00000497015 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
SRSF4-205ENST00000497015 FCHSD2O94868 740 aa13.8□□□□□ -0.2
SRSF4-205ENST00000497015 TATP17735 454 aaPredicted RBP13.8□□□□□ -0.2
SRSF4-205ENST00000497015 HSP90AB2PQ58FF8 381 aa13.8□□□□□ -0.2
SRSF4-205ENST00000497015 RAPGEF4Q8WZA2 1011 aa13.8□□□□□ -0.2
SRSF4-205ENST00000497015 SMARCC1Q92922 1105 aaPredicted RBP13.8□□□□□ -0.2
SRSF4-205ENST00000497015 COG3Q96JB2 828 aa13.8□□□□□ -0.2
SRSF4-205ENST00000497015 TERF2IPQ9NYB0 399 aa13.8□□□□□ -0.2
SRSF4-205ENST00000497015 ASAP1Q9ULH1 1129 aa13.8□□□□□ -0.2
SRSF4-205ENST00000497015 NSD3Q9BZ95 1437 aa13.8□□□□□ -0.2
SRSF4-205ENST00000497015 KCPQ6ZWJ8 1503 aa13.8□□□□□ -0.2
SRSF4-205ENST00000497015 GNPATO15228 680 aa13.79□□□□□ -0.2
SRSF4-205ENST00000497015 HSPA1AP0DMV8 641 aaKnown RBP13.79□□□□□ -0.2
SRSF4-205ENST00000497015 HSPA1BP0DMV9 641 aaKnown RBP13.79□□□□□ -0.2
SRSF4-205ENST00000497015 NKX1-1Q15270 411 aaPredicted RBP13.79□□□□□ -0.2
SRSF4-205ENST00000497015 KIF13BQ9NQT8 1826 aa13.78□□□□□ -0.2
SRSF4-205ENST00000497015 HMGB2P26583 209 aaKnown RBP13.78□□□□□ -0.2
SRSF4-205ENST00000497015 SLC4A9Q96Q91 983 aa13.78□□□□□ -0.2
SRSF4-205ENST00000497015 PCDH11XQ9BZA7 1347 aa13.78□□□□□ -0.2
SRSF4-205ENST00000497015 PCDH11YQ9BZA8 1340 aa13.78□□□□□ -0.2
SRSF4-205ENST00000497015 SLC34A2O95436 690 aa13.77□□□□□ -0.21
SRSF4-205ENST00000497015 C10orf71Q711Q0 1435 aa13.77□□□□□ -0.21
SRSF4-205ENST00000497015 C16orf71Q8IYS4 520 aaPredicted RBP13.77□□□□□ -0.21
SRSF4-205ENST00000497015 ARHGEF1Q92888 912 aaKnown RBP13.77□□□□□ -0.21
SRSF4-205ENST00000497015 ITGB4P16144 1822 aa13.76□□□□□ -0.21
SRSF4-205ENST00000497015 FYB1O15117 783 aa13.76□□□□□ -0.21
SRSF4-205ENST00000497015 ATP6V1AP38606 617 aa13.76□□□□□ -0.21
SRSF4-205ENST00000497015 TMF1P82094 1093 aa13.76□□□□□ -0.21
SRSF4-205ENST00000497015 DCAF5Q96JK2 942 aa13.76□□□□□ -0.21
SRSF4-205ENST00000497015 PUS7Q96PZ0 661 aaKnown RBP13.76□□□□□ -0.21
SRSF4-205ENST00000497015 ATG3Q9NT62 314 aa13.76□□□□□ -0.21
SRSF4-205ENST00000497015 GYS1P13807 737 aa13.75□□□□□ -0.21
SRSF4-205ENST00000497015 NLGN1Q8N2Q7 840 aa13.75□□□□□ -0.21
SRSF4-205ENST00000497015 SPDYE4A6NLX3 237 aa13.74□□□□□ -0.21
SRSF4-205ENST00000497015 TRAPPC3LQ5T215 181 aa13.74□□□□□ -0.21
SRSF4-205ENST00000497015 GGNBP2Q9H3C7 697 aa13.74□□□□□ -0.21
SRSF4-205ENST00000497015 RNF181Q9P0P0 153 aa13.74□□□□□ -0.21
SRSF4-205ENST00000497015 RTL1A6NKG5 1358 aa13.73□□□□□ -0.21
SRSF4-205ENST00000497015 KDM2BQ8NHM5 1336 aa13.73□□□□□ -0.21
SRSF4-205ENST00000497015 SMC1BQ8NDV3 1235 aa13.73□□□□□ -0.21
SRSF4-205ENST00000497015 CCER1Q8TC90 406 aaPredicted RBP13.73□□□□□ -0.21
SRSF4-205ENST00000497015 INSRP06213 1382 aa13.72□□□□□ -0.21
SRSF4-205ENST00000497015 BRCA1P38398 1863 aaKnown RBP13.72□□□□□ -0.21
SRSF4-205ENST00000497015 POTECB2RU33 542 aa13.72□□□□□ -0.21
SRSF4-205ENST00000497015 TPRNQ4KMQ1 711 aa13.72□□□□□ -0.21
SRSF4-205ENST00000497015 TESK2Q96S53 571 aa13.72□□□□□ -0.21
SRSF4-205ENST00000497015 CARD11Q9BXL7 1154 aa13.72□□□□□ -0.21
SRSF4-205ENST00000497015 CCDC87Q9NVE4 849 aa13.72□□□□□ -0.21
SRSF4-205ENST00000497015 PIM2Q9P1W9 311 aa13.72□□□□□ -0.21
SRSF4-205ENST00000497015 CHRNA5P30532 468 aa13.71□□□□□ -0.21
SRSF4-205ENST00000497015 RTCBQ9Y3I0 505 aaKnown RBP13.71□□□□□ -0.21
SRSF4-205ENST00000497015 PLEKHG2Q9H7P9 1386 aa13.71□□□□□ -0.22
SRSF4-205ENST00000497015 DALRD3Q5D0E6 543 aaKnown RBP13.7□□□□□ -0.22
SRSF4-205ENST00000497015 TMOD3Q9NYL9 352 aa13.7□□□□□ -0.22
SRSF4-205ENST00000497015 RPS6KA4O75676 772 aa13.69□□□□□ -0.22
SRSF4-205ENST00000497015 DDR1Q08345 913 aa13.69□□□□□ -0.22
SRSF4-205ENST00000497015 RC3H1Q5TC82 1133 aaKnown RBP13.69□□□□□ -0.22
SRSF4-205ENST00000497015 PARP3Q9Y6F1 533 aa13.69□□□□□ -0.22
SRSF4-205ENST00000497015 KDRP35968 1356 aa13.69□□□□□ -0.22
SRSF4-205ENST00000497015 C4AP0C0L4 1744 aa13.68□□□□□ -0.22
SRSF4-205ENST00000497015 NCAPD2Q15021 1401 aa13.68□□□□□ -0.22
SRSF4-205ENST00000497015 PHKG2P15735 406 aa13.68□□□□□ -0.22
SRSF4-205ENST00000497015 RASSF7Q02833 373 aa13.68□□□□□ -0.22
SRSF4-205ENST00000497015 SRP68Q9UHB9 627 aaKnown RBP13.68□□□□□ -0.22
SRSF4-205ENST00000497015 EMILIN1Q9Y6C2 1016 aa13.68□□□□□ -0.22
SRSF4-205ENST00000497015 PKD1L3Q7Z443 1732 aa13.67□□□□□ -0.22
SRSF4-205ENST00000497015 ARFGEF1Q9Y6D6 1849 aa13.67□□□□□ -0.22
SRSF4-205ENST00000497015 GLTPD2A6NH11 291 aa13.67□□□□□ -0.22
SRSF4-205ENST00000497015 VEGFAP15692 232 aaPredicted RBP13.67□□□□□ -0.22
SRSF4-205ENST00000497015 EYA1Q99502 592 aa13.67□□□□□ -0.22
SRSF4-205ENST00000497015 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.67□□□□□ -0.22
SRSF4-205ENST00000497015 SBF1O95248 1867 aa13.67□□□□□ -0.22
SRSF4-205ENST00000497015 FOXN1O15353 648 aa13.66□□□□□ -0.22
SRSF4-205ENST00000497015 RFC4P35249 363 aa13.66□□□□□ -0.22
SRSF4-205ENST00000497015 SPG7Q9UQ90 795 aa13.66□□□□□ -0.22
SRSF4-205ENST00000497015 KDM6AO15550 1401 aaPredicted RBP13.65□□□□□ -0.22
SRSF4-205ENST00000497015 SMG6Q86US8 1419 aaKnown RBP13.65□□□□□ -0.22
SRSF4-205ENST00000497015 ST20-MTHFSA0A0A6YYL1 179 aa13.65□□□□□ -0.22
SRSF4-205ENST00000497015 TM4SF1P30408 202 aa13.65□□□□□ -0.22
SRSF4-205ENST00000497015 RBM42Q9BTD8 480 aaKnown RBP13.65□□□□□ -0.22
SRSF4-205ENST00000497015 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.65□□□□□ -0.226e-7■□□□□ 10.3
SRSF4-205ENST00000497015 ZNF219Q9P2Y4 722 aaPredicted RBP13.65□□□□□ -0.22
SRSF4-205ENST00000497015 FLT4P35916 1363 aa13.65□□□□□ -0.22
SRSF4-205ENST00000497015 TNRC6CQ9HCJ0 1690 aaKnown RBP13.64□□□□□ -0.23
SRSF4-205ENST00000497015 IFNL2Q8IZJ0 200 aa13.64□□□□□ -0.23
SRSF4-205ENST00000497015 CNTNAP4Q9C0A0 1308 aa13.64□□□□□ -0.23
SRSF4-205ENST00000497015 POLRMTO00411 1230 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms